Miyakogusa Predicted Gene

Lj0g3v0070429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0070429.1 tr|I3SMT5|I3SMT5_LOTJA Superoxide dismutase
[Cu-Zn] OS=Lotus japonicus PE=2 SV=1,99.38,0,Cu,Zn superoxide
dismutase-like,Superoxide dismutase, copper/zinc binding domain;
SOD_CU_ZN_1,Supero,CUFF.3525.1
         (160 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g029200.1 | superoxide dismutase [Cu-Zn] protein | HC | ch...   270   4e-73
Medtr6g029200.2 | superoxide dismutase [Cu-Zn] protein | HC | ch...   252   1e-67
Medtr7g114240.1 | superoxide dismutase [Cu-Zn] protein | HC | ch...   213   4e-56
Medtr7g114240.3 | superoxide dismutase [Cu-Zn] protein | HC | ch...   213   4e-56
Medtr4g057240.1 | superoxide dismutase [Cu-Zn] protein | HC | ch...   178   2e-45
Medtr7g114240.2 | superoxide dismutase [Cu-Zn] protein | HC | ch...   134   3e-32
Medtr4g101820.1 | Cu/Zn-superoxide dismutase copper chaperone | ...    58   3e-09

>Medtr6g029200.1 | superoxide dismutase [Cu-Zn] protein | HC |
           chr6:10035658-10039807 | 20130731
          Length = 161

 Score =  270 bits (690), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 138/161 (85%), Positives = 148/161 (91%), Gaps = 1/161 (0%)

Query: 1   MESTKGTVKGVALINGDNSIRGSIQFVQHPSG-ITHVTGRITGLTPGLHGFHIHALGDTT 59
           ME  KGTVKGVALI GDN++RGS+ F+QHP+G  THVTG+ITGL+PGLHGFHIHALGDTT
Sbjct: 1   MEGGKGTVKGVALIIGDNNVRGSLHFLQHPNGNYTHVTGKITGLSPGLHGFHIHALGDTT 60

Query: 60  NGCNSTGPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILG 119
           NGCNSTGPHFNPLKK+HGAP+D+ERHAGDLGNI  G DGVAEISI D  IPLSGVHSILG
Sbjct: 61  NGCNSTGPHFNPLKKDHGAPTDDERHAGDLGNIVAGPDGVAEISIRDGKIPLSGVHSILG 120

Query: 120 RAVVVHADPDDLGRGGHELSKTTGNAGARVGCGIIGLQSSV 160
           RAVVVHADPDDLGRGGHELSKTTGNAGARV CGIIGLQSSV
Sbjct: 121 RAVVVHADPDDLGRGGHELSKTTGNAGARVACGIIGLQSSV 161


>Medtr6g029200.2 | superoxide dismutase [Cu-Zn] protein | HC |
           chr6:10035658-10039807 | 20130731
          Length = 151

 Score =  252 bits (643), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/160 (82%), Positives = 140/160 (87%), Gaps = 9/160 (5%)

Query: 1   MESTKGTVKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTN 60
           ME  KGTVKGVALI GDN++RG+          THVTG+ITGL+PGLHGFHIHALGDTTN
Sbjct: 1   MEGGKGTVKGVALIIGDNNVRGNY---------THVTGKITGLSPGLHGFHIHALGDTTN 51

Query: 61  GCNSTGPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGR 120
           GCNSTGPHFNPLKK+HGAP+D+ERHAGDLGNI  G DGVAEISI D  IPLSGVHSILGR
Sbjct: 52  GCNSTGPHFNPLKKDHGAPTDDERHAGDLGNIVAGPDGVAEISIRDGKIPLSGVHSILGR 111

Query: 121 AVVVHADPDDLGRGGHELSKTTGNAGARVGCGIIGLQSSV 160
           AVVVHADPDDLGRGGHELSKTTGNAGARV CGIIGLQSSV
Sbjct: 112 AVVVHADPDDLGRGGHELSKTTGNAGARVACGIIGLQSSV 151


>Medtr7g114240.1 | superoxide dismutase [Cu-Zn] protein | HC |
           chr7:47131306-47132922 | 20130731
          Length = 152

 Score =  213 bits (543), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 106/150 (70%), Positives = 120/150 (80%)

Query: 8   VKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGP 67
           VK VA++   N + G+I F Q  +G T VTG ++GL PGLHGFHIHALGDTTNGC STGP
Sbjct: 2   VKAVAVLGNSNDVSGTISFTQEGNGPTTVTGNLSGLKPGLHGFHIHALGDTTNGCLSTGP 61

Query: 68  HFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHAD 127
           HFNP  K HGAP DE RHAGDLGN+ VG DG A  +I+D  IPL+G +SI+GRAVVVHAD
Sbjct: 62  HFNPNGKEHGAPEDETRHAGDLGNVTVGDDGTASFTITDNQIPLTGPNSIIGRAVVVHAD 121

Query: 128 PDDLGRGGHELSKTTGNAGARVGCGIIGLQ 157
           PDDLG+GGHELSKTTGNAG RV CGIIGLQ
Sbjct: 122 PDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151


>Medtr7g114240.3 | superoxide dismutase [Cu-Zn] protein | HC |
           chr7:47131306-47132922 | 20130731
          Length = 152

 Score =  213 bits (543), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 106/150 (70%), Positives = 120/150 (80%)

Query: 8   VKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGP 67
           VK VA++   N + G+I F Q  +G T VTG ++GL PGLHGFHIHALGDTTNGC STGP
Sbjct: 2   VKAVAVLGNSNDVSGTISFTQEGNGPTTVTGNLSGLKPGLHGFHIHALGDTTNGCLSTGP 61

Query: 68  HFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHAD 127
           HFNP  K HGAP DE RHAGDLGN+ VG DG A  +I+D  IPL+G +SI+GRAVVVHAD
Sbjct: 62  HFNPNGKEHGAPEDETRHAGDLGNVTVGDDGTASFTITDNQIPLTGPNSIIGRAVVVHAD 121

Query: 128 PDDLGRGGHELSKTTGNAGARVGCGIIGLQ 157
           PDDLG+GGHELSKTTGNAG RV CGIIGLQ
Sbjct: 122 PDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151


>Medtr4g057240.1 | superoxide dismutase [Cu-Zn] protein | HC |
           chr4:20936894-20933134 | 20130731
          Length = 206

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 107/143 (74%)

Query: 14  INGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLK 73
           + G++++ G +   Q   G T V  RITGLTPGLHGFH+H  GDTTNGC STGPHFNP +
Sbjct: 61  LKGNSTVEGVVTLTQENEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQ 120

Query: 74  KNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHADPDDLGR 133
             HGAP DE RHAGDLGNI    +GVAE +I D  IPL+G +S++GRA+VVH   DDLG+
Sbjct: 121 LTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGK 180

Query: 134 GGHELSKTTGNAGARVGCGIIGL 156
           GGHELS +TGNAG R+ CG++GL
Sbjct: 181 GGHELSLSTGNAGGRLACGVVGL 203


>Medtr7g114240.2 | superoxide dismutase [Cu-Zn] protein | HC |
           chr7:47131306-47132217 | 20130731
          Length = 130

 Score =  134 bits (338), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 83/127 (65%), Gaps = 3/127 (2%)

Query: 8   VKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGP 67
           VK VA++   N + G+I F Q  +G T VTG ++GL PGLHGFHIHALGDTTNGC STGP
Sbjct: 2   VKAVAVLGNSNDVSGTISFTQEGNGPTTVTGNLSGLKPGLHGFHIHALGDTTNGCLSTGP 61

Query: 68  HFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGV---HSILGRAVVV 124
           HFNP  K HGAP DE RHAGDLGN+ VG DG A  +I+D  +  S +   +S L     +
Sbjct: 62  HFNPNGKEHGAPEDETRHAGDLGNVTVGDDGTASFTITDNQVCYSSLELRYSFLMNYSKL 121

Query: 125 HADPDDL 131
              P+  
Sbjct: 122 TTRPESF 128


>Medtr4g101820.1 | Cu/Zn-superoxide dismutase copper chaperone | HC
           | chr4:42120514-42125478 | 20130731
          Length = 312

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 20  IRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPL-KKNHGA 78
           I G ++  Q    +  +    +GL+PG H + I+  GD T G  STG  FNPL ++N   
Sbjct: 166 IFGVVRLAQVNMELARIEANFSGLSPGKHSWSINEFGDLTRGAASTGKVFNPLNEENTKE 225

Query: 79  PSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHADPD 129
           P       GDLG + V   G  E   + V   L  V  ++GRAVV++A  D
Sbjct: 226 P------LGDLGTLDVNEKG--EAFFTGVKEKLR-VSDLIGRAVVLYATED 267