Miyakogusa Predicted Gene

Lj0g3v0069309.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0069309.1 Non Characterized Hit- tr|I1HY90|I1HY90_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.09,9e-19,seg,NULL,CUFF.3315.1
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g035090.1 | inactive Serine/Threonine-kinase BUB1-like pro...   172   1e-43

>Medtr1g035090.1 | inactive Serine/Threonine-kinase BUB1-like
           protein, putative | HC | chr1:12656005-12651869 |
           20130731
          Length = 390

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/175 (57%), Positives = 114/175 (65%), Gaps = 14/175 (8%)

Query: 1   MEKLAPGRSFGTLLAKTENRAPXXXXXXXXXXXXXXXXGTSLS------------IYKDS 48
           +EK AP RSFGTLLAK +N AP                 ++LS            IYKDS
Sbjct: 217 VEKEAPVRSFGTLLAKGDNGAPLAPLSSNRSSKPLAPLNSNLSVKNDRTRAAPLSIYKDS 276

Query: 49  AATGETYSQQSDISQPWHTLGARAERNKENNAIPGKWKSFKIPQRPGTISGAATASA-IP 107
            A  ET   Q D S  W  LG RAERNKENNAIP KWKSFK+PQRPGT +    ASA IP
Sbjct: 277 NANAETCPPQPDPSHSWLKLGGRAERNKENNAIPAKWKSFKVPQRPGTRATVVGASACIP 336

Query: 108 VFIDEECQDSQSMKAEGCKSSSLKIRQEDDKDLKSETELLRKNPLRNFPKNSLPR 162
           VF+DEE Q S + KAEG KSS+LK RQ+D+KDLK ETELLRK+PLRNFP +SLPR
Sbjct: 337 VFVDEEYQGSLNPKAEG-KSSNLKTRQDDEKDLKRETELLRKDPLRNFPHSSLPR 390