Miyakogusa Predicted Gene

Lj0g3v0069249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0069249.1 tr|G7LB10|G7LB10_MEDTR Cell division protease
ftsH-like protein OS=Medicago truncatula GN=MTR_8g0568,76.27,0,FTSH
HOMOLOG,NULL; METALLOPROTEASE M41 FTSH,NULL; P-loop containing
nucleoside triphosphate hydrolas,CUFF.3313.1
         (532 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g056860.1 | ATP-dependent zinc metalloprotease FTSH protei...   840   0.0  

>Medtr8g056860.1 | ATP-dependent zinc metalloprotease FTSH protein |
           HC | chr8:18930054-18944115 | 20130731
          Length = 988

 Score =  840 bits (2169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/531 (76%), Positives = 459/531 (86%), Gaps = 4/531 (0%)

Query: 1   MDLIISHSPNPLFVSSSPFPSTSQNPTFLTFAAPYSRRRKLKFRASASADPNGAGASSWF 60
           M L   +  NP  +SSSP   + QNP F T     + RRKLK RAS++ADPNGA  SSW 
Sbjct: 1   MALKFPNPSNPFLLSSSPLTPSLQNPNFFTLHFS-NHRRKLKLRASSTADPNGADGSSWS 59

Query: 61  QPLQRASRRFWVKFGDLVKKETGVDLEDGAVKLGEFVDGVKYNGDEFGRIGTRSVTQFVD 120
           + L RASRRF VKFGD+VKKETGVDL DG  K+GEFVDGV+  G E  RI   S+ +FVD
Sbjct: 60  ESLDRASRRFLVKFGDMVKKETGVDLGDGVGKVGEFVDGVRKVGSEL-RIP--SLDEFVD 116

Query: 121 WNRLERWKDLKNWEPKRIGALVLYILVVAFACRGVYVAIQAPYLNRQRKELTEAYMEALI 180
           WNR E WK++KNWEP+RIGALVLYI VVAFACRGV+VAIQAP+LN QRKE TEAYME LI
Sbjct: 117 WNRFENWKNVKNWEPRRIGALVLYIFVVAFACRGVFVAIQAPFLNHQRKESTEAYMEVLI 176

Query: 181 PEPSPSNIRRFEKGMWKRTMPKGLKMKKLIERPDGTLVHDTTYVGEDAWEDDQETPEEHV 240
           P P+P+NIR+F+K +W++TMPKGLK+KK IERPDGTLVHD+T+VGEDAWE+DQE+ +EHV
Sbjct: 177 PAPTPTNIRKFKKVVWRKTMPKGLKIKKFIERPDGTLVHDSTFVGEDAWENDQESSDEHV 236

Query: 241 KQIIKDDERLNRQEKKELTKDLGISGEVQIEGTWRERLHKWKEILRKERLVEQLDSLNAK 300
           KQI+ D+ERLN +EK ELTKDL ISGEVQ EGTWRERLHKW+EIL KERLVEQL+SLNAK
Sbjct: 237 KQIVGDEERLNSEEKNELTKDLAISGEVQTEGTWRERLHKWREILGKERLVEQLNSLNAK 296

Query: 301 YVVEFDMKEVENSLRKDVAEKATATPGTRGLWIAKRWWRYRPKLPYNYFLEKLDSSEVAA 360
           Y V+FDMKEVENSLRK+V EK   T GTR LWIAKRWWRYRPKLPYNYFL+KLDSSEV A
Sbjct: 297 YEVDFDMKEVENSLRKEVVEKVRTTQGTRALWIAKRWWRYRPKLPYNYFLDKLDSSEVEA 356

Query: 361 VVFTEDLKRLYVTMKEGFPLEYVVDIPLDPHMFEIITSSGVEVDLLQKQQIHYFMKVVIA 420
           V+FTED+KRLYVTMKEGFPLEYVVDIPLDP++FEII+SSGVEVDLLQKQQIHYF+KV IA
Sbjct: 357 VIFTEDMKRLYVTMKEGFPLEYVVDIPLDPYLFEIISSSGVEVDLLQKQQIHYFLKVAIA 416

Query: 421 LLPGILILWLIRESMTLLLITSKRFLYKKYNQLYDMAHAENFIMPVGDVGETKSMYKEVV 480
            LPGILIL L+++S+ +L +TS RFLYKKYNQL+DMA+AENFI+PVGDVGETKSM KEVV
Sbjct: 417 FLPGILILILMKQSLAILHLTSSRFLYKKYNQLFDMAYAENFILPVGDVGETKSMSKEVV 476

Query: 481 LGGDVWDLLDELMIYMGNPMQFYEKDVNFVRGVLLSGPPGTGKTLFARTLA 531
           LGGDVWDLLDELMIYM NPMQFYE+DV FVRGVLLSGPPGTGKTLFARTLA
Sbjct: 477 LGGDVWDLLDELMIYMRNPMQFYERDVKFVRGVLLSGPPGTGKTLFARTLA 527