Miyakogusa Predicted Gene

Lj0g3v0069039.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0069039.1 Non Characterized Hit- tr|Q9C9B8|Q9C9B8_ARATH
Putative uncharacterized protein F2P9.16 OS=Arabidopsi,68.12,2e-19,
,CUFF.3299.1
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g010350.1 | hypothetical protein | HC | chr3:2426516-24222...   153   3e-38

>Medtr3g010350.1 | hypothetical protein | HC | chr3:2426516-2422242
           | 20130731
          Length = 827

 Score =  153 bits (386), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 78/106 (73%), Positives = 89/106 (83%), Gaps = 9/106 (8%)

Query: 1   MDLLLHLVFLVGIQVLPNLMKLLAQLITKLPQDAQNIVLNELYSQVADSDDVIRKPTLVS 60
           MDLLL LVFLV IQVLPNLM+LLAQLITKLPQDAQNIVLNELYSQVADSDDV+RKP LVS
Sbjct: 731 MDLLLRLVFLVDIQVLPNLMQLLAQLITKLPQDAQNIVLNELYSQVADSDDVVRKPMLVS 790

Query: 61  WLQSLSYVCTNSTNQNAASHISKSEDNLSSPSIADPLTSGRLTAHL 106
           WLQSLSY+CT ++NQ+ AS  + SE         DP+++GR+TAHL
Sbjct: 791 WLQSLSYLCTMASNQSTASKKNNSE---------DPISAGRITAHL 827