Miyakogusa Predicted Gene

Lj0g3v0068929.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068929.1 Non Characterized Hit- tr|K3XPS2|K3XPS2_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,33.16,7e-19,seg,NULL,CUFF.3294.1
         (289 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g017235.1 | hypothetical protein | HC | chr6:6878265-68849...   266   2e-71

>Medtr6g017235.1 | hypothetical protein | HC | chr6:6878265-6884950
           | 20130731
          Length = 527

 Score =  266 bits (680), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 144/277 (51%), Positives = 169/277 (61%), Gaps = 14/277 (5%)

Query: 11  IKLMRCAVIRCSRPVWXXXXXXXXXXXXEENGVRIFALRRLVAA----KRVGXXXXXXXX 66
           ++LM+CAVIRC RPVW            EENGVR+F LRRLV      +RVG        
Sbjct: 193 LRLMKCAVIRCLRPVWSLSISFGFLILGEENGVRVFGLRRLVKGNVVVRRVGNSKSSLKQ 252

Query: 67  XXXXXXPNXXXXXXXXXXXXXXXXEGVLEATCNGDTEAKVEKHGVAVKQTNVKFKHDQND 126
                                   + VLE  CNG  E K+EKHGVAV+Q+NVK KH   D
Sbjct: 253 LANGDRGGKCRGGG----------DKVLEGNCNGGFEGKIEKHGVAVRQSNVKSKHGNRD 302

Query: 127 GGACFVALKGNEIETKSIAKVSMSVKAISIQALTQRMFXXXXXXXXXXXXXXXNFGIGVD 186
           GGACF+ALKGNE+ETKS++KVS SVKAISI+AL+Q+MF               N G GVD
Sbjct: 303 GGACFLALKGNEVETKSMSKVSKSVKAISIKALSQKMFMILDSHGDLHLLCLYNSGFGVD 362

Query: 187 ITGHVWQLPHVMKVQSLTVLPDVSTVPQTAWISDGCHSVHMFSTXXXXXXXXXXXXXXXX 246
           ITGHV QLPHVMKV+SL V PD+S   QT WISDGCHSVHMF+                 
Sbjct: 363 ITGHVRQLPHVMKVKSLAVHPDISATSQTIWISDGCHSVHMFTMDMENALNVADVNDDGD 422

Query: 247 QKLMHLPVIRVLFSTEKIQDIISIAANSVLILGQGSL 283
           +KLMHL V +VLFS+EKIQDII IA+NS++ILGQ SL
Sbjct: 423 EKLMHLQVTQVLFSSEKIQDIIPIASNSIMILGQVSL 459