Miyakogusa Predicted Gene

Lj0g3v0068489.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068489.2 Non Characterized Hit- tr|I1LXY1|I1LXY1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3920 PE=,94.44,0,no
description,NULL; Meth_synt_2,Methionine synthase, vitamin-B12
independent; 5-METHYLTETRAHYDROPTE,CUFF.3256.2
         (260 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g079640.1 | cobalamin-independent methionine synthase | HC...   529   e-150
Medtr7g086300.1 | cobalamin-independent methionine synthase | HC...   493   e-140
Medtr6g027920.2 | cobalamin-independent methionine synthase | HC...   493   e-140
Medtr6g027920.1 | cobalamin-independent methionine synthase | HC...   493   e-140
Medtr7g086300.2 | cobalamin-independent methionine synthase | HC...   147   1e-35

>Medtr3g079640.1 | cobalamin-independent methionine synthase | HC |
           chr3:35943580-35948815 | 20130731
          Length = 813

 Score =  529 bits (1362), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 252/270 (93%), Positives = 255/270 (94%), Gaps = 10/270 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGF FTANGWVQSYGSRCVKPPIIYG          FWSSTAQSLTKRPMK
Sbjct: 544 MVEYFGEQLSGFTFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSTAQSLTKRPMK 603

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGI+VIQIDEAALREGLPL
Sbjct: 604 GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPL 663

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RKSEE+FYLNWAVHSFRITNCGV DTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS
Sbjct: 664 RKSEESFYLNWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 723

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL
Sbjct: 724 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 783

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQLASAK 260
           KTRKYTEVK ALTNMV AAKLIR QLAS+K
Sbjct: 784 KTRKYTEVKPALTNMVDAAKLIRKQLASSK 813


>Medtr7g086300.1 | cobalamin-independent methionine synthase | HC |
           chr7:33471661-33466402 | 20130731
          Length = 803

 Score =  493 bits (1270), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/267 (88%), Positives = 242/267 (90%), Gaps = 10/267 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG          FWS+ AQS TKRPMK
Sbjct: 536 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSALAQSFTKRPMK 595

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR DQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALREGLPL
Sbjct: 596 GMLTGPVTILNWSFVRVDQPRSETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPL 655

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RKSE A YL+WAVHSFRITN GV D+TQIHTHMCYSNFNDIIHSII+MDADVITIENSRS
Sbjct: 656 RKSEHAHYLDWAVHSFRITNVGVQDSTQIHTHMCYSNFNDIIHSIINMDADVITIENSRS 715

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLLSVFREGV YGAGIGPGVYDIHSPRIPPT+EIADRINKMLAVLE N+LWVNPDCGL
Sbjct: 716 DEKLLSVFREGVVYGAGIGPGVYDIHSPRIPPTDEIADRINKMLAVLEKNVLWVNPDCGL 775

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQLA 257
           KTRKYTEVK AL NMVAAAK IRN+LA
Sbjct: 776 KTRKYTEVKPALLNMVAAAKQIRNELA 802


>Medtr6g027920.2 | cobalamin-independent methionine synthase | HC |
           chr6:9831569-9836270 | 20130731
          Length = 765

 Score =  493 bits (1270), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/270 (87%), Positives = 244/270 (90%), Gaps = 10/270 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGFAFT NGWVQSYGSRCVKPPIIYG          FWSS AQS+TKRPMK
Sbjct: 496 MVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMK 555

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR+DQPR ETCYQIALAIKDEVEDLEKAGI+VIQIDEAALREGLPL
Sbjct: 556 GMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPL 615

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RKS +A YL+WAVHSFRITN GV DTTQIHTHMCYS+FNDIIHSIIDMDADVITIENSRS
Sbjct: 616 RKSGQADYLDWAVHSFRITNVGVQDTTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRS 675

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLL VFR+GVKYGAGIGPGVYDIHSPRIPPTEEIA+RINKMLAVLE N+LWVNPDCGL
Sbjct: 676 DEKLLRVFRDGVKYGAGIGPGVYDIHSPRIPPTEEIAERINKMLAVLEKNVLWVNPDCGL 735

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQLASAK 260
           KTRKYTEV  ALT MV A K IRNQLAS K
Sbjct: 736 KTRKYTEVNPALTAMVEATKRIRNQLASGK 765


>Medtr6g027920.1 | cobalamin-independent methionine synthase | HC |
           chr6:9831391-9836270 | 20130731
          Length = 765

 Score =  493 bits (1270), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/270 (87%), Positives = 244/270 (90%), Gaps = 10/270 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGFAFT NGWVQSYGSRCVKPPIIYG          FWSS AQS+TKRPMK
Sbjct: 496 MVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMK 555

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR+DQPR ETCYQIALAIKDEVEDLEKAGI+VIQIDEAALREGLPL
Sbjct: 556 GMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPL 615

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RKS +A YL+WAVHSFRITN GV DTTQIHTHMCYS+FNDIIHSIIDMDADVITIENSRS
Sbjct: 616 RKSGQADYLDWAVHSFRITNVGVQDTTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRS 675

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLL VFR+GVKYGAGIGPGVYDIHSPRIPPTEEIA+RINKMLAVLE N+LWVNPDCGL
Sbjct: 676 DEKLLRVFRDGVKYGAGIGPGVYDIHSPRIPPTEEIAERINKMLAVLEKNVLWVNPDCGL 735

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQLASAK 260
           KTRKYTEV  ALT MV A K IRNQLAS K
Sbjct: 736 KTRKYTEVNPALTAMVEATKRIRNQLASGK 765


>Medtr7g086300.2 | cobalamin-independent methionine synthase | HC |
           chr7:33471382-33465973 | 20130731
          Length = 650

 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/106 (67%), Positives = 79/106 (74%), Gaps = 10/106 (9%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG          FWS+ AQS TKRPMK
Sbjct: 496 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSALAQSFTKRPMK 555

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISV 96
           GMLTGPVTILNWSFVR DQPR++      +  K +  +L K  IS+
Sbjct: 556 GMLTGPVTILNWSFVRVDQPRYKLDPPYNITGKVQHTELNKEMISI 601