Miyakogusa Predicted Gene
- Lj0g3v0068469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0068469.1 tr|G7IRI9|G7IRI9_MEDTR Condensin complex subunit
2 OS=Medicago truncatula GN=MTR_2g087880 PE=3
SV=1,69.14,0,Cnd2,Condensin complex subunit 2/barren; GB DEF:
HYPOTHETICAL PROTEIN AT2G32590,NULL; FAMILY NOT NAM,CUFF.3266.1
(615 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g050060.1 | condensin complex subunit 2 | HC | chr4:176941... 823 0.0
Medtr2g087880.1 | condensin complex subunit 2 | HC | chr2:369925... 820 0.0
>Medtr4g050060.1 | condensin complex subunit 2 | HC |
chr4:17694113-17688616 | 20130731
Length = 666
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/594 (68%), Positives = 474/594 (79%), Gaps = 10/594 (1%)
Query: 24 TAAPSK-RLPVAARILSPTSPVFIGSNDDQVEXXXXXXXXXXXXXXKSLAAAANFPSRDP 82
T +P+K RLPVAARI SPTSP +GSNDDQ+E K+L + S +
Sbjct: 4 TLSPTKHRLPVAARIQSPTSPFILGSNDDQLERAQARAARAAAIRRKNLPVSQ---SLEA 60
Query: 83 DSDPCLTKDQILDLFHNCIKLAAENKINQKNTWELKLIDHLTDFIRTEEESDVETNFQIA 142
DSDPCL K QI DLF NCIKLA+ENKINQKNTWEL LIDHLTD I+ EEE+D ETNFQ A
Sbjct: 61 DSDPCLNKQQIFDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDTETNFQKA 120
Query: 143 SCTLEAGVKIYSLRVDSVHSEAYKVLARMNRVGQEAEEDSTLDSVNAEDGHEESKKGIDK 202
SCTLEAGVKIYSLRVDSVHSEAYKVL MNR GQEAE+D+TL+ VN E+G E S+K DK
Sbjct: 121 SCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEQDTTLEGVNVENGQEGSRKETDK 180
Query: 203 KLSPLSTLESSFEALNVKKFDVAFAVDPLYRHTSAQFDEGGAKGLLMNNLGVYGGCRVLF 262
KLSPLSTLESSFE LNVKKFD AF VDPLYR T+A+FDEGGAKGLLMNNLGVYGGCR+LF
Sbjct: 181 KLSPLSTLESSFEVLNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRLLF 240
Query: 263 DSLEVPGKCIASQSEQDISDTIDLSFLRDCIEEMLLNMRMKDEISPTLRVIVNQFDENNR 322
DSLEVP KC+ SQ+E DISDTIDLSF RDC+EE++L MR+KDEISPTLR IVNQFDENN+
Sbjct: 241 DSLEVPAKCMESQNEPDISDTIDLSFARDCVEEIVLEMRVKDEISPTLRTIVNQFDENNK 300
Query: 323 RPSDFEFSGQKSAEEFGVDIDCSIAAERGEYENFPSWCNDHDNQTFVAEQGSNDAEPSFS 382
RP+ F+ GQ SAEE D +C A+R EY+N +W +DHD+Q +A+ GSNDA+PSFS
Sbjct: 301 RPTGFQLPGQNSAEELDADFNCENGADREEYDNGATWSDDHDDQPVIADLGSNDADPSFS 360
Query: 383 SYPQEKEPFPSQDSDMDGNFENVDEYIFLSLGLRSKKNAWAGPDHWKYGKAKESVARCTS 442
SYPQE E FPS DSDMD FENVD ++FLSLG SK NAWAGPDHWKY K+K S + TS
Sbjct: 361 SYPQENEQFPSTDSDMDDRFENVDGFLFLSLGFNSKHNAWAGPDHWKYKKSKVSEVQPTS 420
Query: 443 EDDSTLETRQPRAKRQDEDDLEFTSCLETKFPDIFCPPKNSKSLLLPENRPPCVTKLPED 502
ED STL+ RQ ++K+Q E DL+FT+ LE DIF PPKN K+LLLPE+R PC TKLPED
Sbjct: 421 EDGSTLKPRQTKSKKQAEVDLDFTNSLEKDLSDIFAPPKNPKTLLLPESRSPCNTKLPED 480
Query: 503 CHYEPQDLVKLFLLPNVKCLGRRARKLSDV--SEEQGNDYESFPSWDNG-GVGD---GEY 556
CHY+P++LVKLFLLP+VKCLGRRA++ SD S +Q N+ + FPSWDNG GD G+Y
Sbjct: 481 CHYQPEELVKLFLLPDVKCLGRRAKRFSDADGSRDQFNENDPFPSWDNGSACGDDEAGDY 540
Query: 557 DGDTHSDIDDPSTLISQPRRVNKIEVDYDKTSKQVDVQALKIALWDHIQESIQL 610
+GD HSDI+DP TLI+QPR+V+KIEV YDKTSKQVDVQ LK+ LWDH+QES++L
Sbjct: 541 EGDHHSDIEDPGTLITQPRQVSKIEVQYDKTSKQVDVQVLKVTLWDHVQESVKL 594
>Medtr2g087880.1 | condensin complex subunit 2 | HC |
chr2:36992549-36998312 | 20130731
Length = 656
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/599 (69%), Positives = 479/599 (79%), Gaps = 19/599 (3%)
Query: 18 VSPNPTTAAPSKRLPVAARILSPTSPVFIGSNDDQVEXXXXXXXXXXXXXXKSLAAAANF 77
SPNPTT KRLP +P + F+GSNDDQ+E ++ NF
Sbjct: 5 ASPNPTTVH-KKRLP------TPATTFFVGSNDDQLERAAARAARA-----AAIRRTVNF 52
Query: 78 PSRDPDSDPCLTKDQILDLFHNCIKLAAENKINQKNTWELKLIDHLTDFIRTEEESDVET 137
S+ DSDPCL K QIL+LFHNCIKLA+ENKINQKNTW+L LIDHLTD IR E++++ ET
Sbjct: 53 QSQPSDSDPCLNKQQILELFHNCIKLASENKINQKNTWDLDLIDHLTDIIRAEDDNNTET 112
Query: 138 NFQIASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRVGQEAEEDSTLDSVNAEDGHEESK 197
NFQ+ASCTLEAGVKIYSLRVDSV+SEAYKVLARM+RVGQE E+D+TL SVN E G EESK
Sbjct: 113 NFQMASCTLEAGVKIYSLRVDSVYSEAYKVLARMSRVGQETEQDATLASVNGEGGREESK 172
Query: 198 KGIDKKLSPLSTLESSFEALNVKKFDVAFAVDPLYRHTSAQFDEGGAKGLLMNNLGVYGG 257
KGIDKKLSPLSTLESSFEALNVKKFDVAFAVDPLYR TSA+FDEGGAKGLLMNNLGVYG
Sbjct: 173 KGIDKKLSPLSTLESSFEALNVKKFDVAFAVDPLYRKTSAKFDEGGAKGLLMNNLGVYGR 232
Query: 258 CRVLFDSLEVPGKCIASQSEQDISDTIDLSFLRDCIEEMLLNMRMKDEISPTLRVIVNQF 317
CRVLFDSL+VPGK +ASQ+E D+SDT+DLSF RDC+E+ML +M++K+EISPTLRVIVN
Sbjct: 233 CRVLFDSLDVPGKYLASQNEHDVSDTVDLSFARDCVEQMLSDMQIKEEISPTLRVIVNIL 292
Query: 318 DENNRRPSDFEFSGQKSAEEFGVDIDCSIAAERGEYENFPSWCNDHDNQTFVAEQGSNDA 377
DE +RRP DF+ +GQKS++EF IDC + AE +YENFP+ +HDNQTFV E GSNDA
Sbjct: 293 DETDRRPFDFQSNGQKSSQEFDAAIDCEVGAEMEDYENFPTGPYEHDNQTFVNEMGSNDA 352
Query: 378 EPSFSSYPQEKEPFPSQDSDMDGNFENVDEYIFLSLGLRSKKNAWAGPDHWKYGKAK--E 435
+P+ SYPQE+EPFPSQD +MD F NVDEY+ SLG RSKKNAWAGPDHW+Y KAK E
Sbjct: 353 DPNVPSYPQEEEPFPSQDLEMDELFGNVDEYLSFSLGFRSKKNAWAGPDHWQYQKAKGSE 412
Query: 436 SVARCTSEDDSTLETRQPRAKRQDEDDLEFTSCLETKFPDIFCPPKNSKSLLLPENRPPC 495
S C++ED STL+TR P+ +Q E DL+FT+ L PDIF PPK+ KSLLL ENRP C
Sbjct: 413 SEVHCSTEDASTLKTRPPKTMKQIEVDLDFTNFLGKTPPDIFAPPKSPKSLLLSENRPHC 472
Query: 496 VTKLPEDCHYEPQDLVKLFLLPNVKCLGRRARKLSDV----SEEQGNDYESFPSWDNGGV 551
VTKLPEDCHYEP++LVKLFLLP+VKCLGRR RKLS V S EQ N+ E F SWDNG V
Sbjct: 473 VTKLPEDCHYEPENLVKLFLLPDVKCLGRRTRKLSGVYTDGSTEQCNNNEPFNSWDNGSV 532
Query: 552 GDGEYDGDTHSDIDDPSTLISQPRRVNKIEVDYDKTSKQVDVQALKIALWDHIQESIQL 610
DGEYD D HSD+DD STLISQ R++NKIEV YDKTSKQVDVQALK+ LW+HI+ES+ L
Sbjct: 533 CDGEYD-DAHSDMDDSSTLISQARQINKIEVQYDKTSKQVDVQALKLTLWNHIEESVHL 590