Miyakogusa Predicted Gene

Lj0g3v0068329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068329.1 Non Characterized Hit- tr|K4AVE9|K4AVE9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,91.84,5e-18,PurA,PUR-alpha/beta/gamma, DNA/RNA-binding;
PUR-TRANSCRIPTIONAL ACTIVATOR,PUR-alpha/beta/gamma,
DNA/,NODE_32396_length_814_cov_492.296082.path1.1
         (158 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g083230.1 | transcription factor Pur-alpha-like protein | ...   284   3e-77

>Medtr4g083230.1 | transcription factor Pur-alpha-like protein | HC
           | chr4:32397162-32392678 | 20130731
          Length = 293

 Score =  284 bits (726), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 136/140 (97%), Positives = 140/140 (100%)

Query: 19  DVELLCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYV 78
           DVELLCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYV
Sbjct: 25  DVELLCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYV 84

Query: 79  NSDDQDLFSKELQLDTKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSRDEGWAA 138
           NS+DQ+LFSKELQLDTKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSRDEGWAA
Sbjct: 85  NSEDQELFSKELQLDTKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSRDEGWAA 144

Query: 139 FRNILAEINEASRLFIMPNQ 158
           FRNILAEINEASRLF++PNQ
Sbjct: 145 FRNILAEINEASRLFLLPNQ 164



 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 37/56 (66%)

Query: 23  LCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYV 78
           + K ++ + K F+FDL  N RG +L+ISE   + RS+II+P SG+  F ++  ++V
Sbjct: 215 VSKVIRADQKRFFFDLGNNNRGHFLRISEVAGSDRSSIILPLSGLKQFHEIVGHFV 270