Miyakogusa Predicted Gene

Lj0g3v0068279.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068279.1 Non Characterized Hit- tr|H9WV19|H9WV19_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,59.02,0.0000000001,seg,NULL,
NODE_2536_length_1224_cov_287.145416.path1.1
         (247 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g094550.1 | SIT4 phosphatase-associated family protein | H...   296   1e-80
Medtr2g094550.2 | SIT4 phosphatase-associated family protein | H...   296   1e-80

>Medtr2g094550.1 | SIT4 phosphatase-associated family protein | HC |
           chr2:40333208-40342380 | 20130731
          Length = 851

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 160/247 (64%), Positives = 185/247 (74%), Gaps = 1/247 (0%)

Query: 1   MMDEINLXXXXXXXXXXXXXXXXXXXXXXXXXKNTLNGTSSSNTDFISGSTDSNSMNGGA 60
           MMDEINL                         KNT+N TSSS+T+F SG   SNS NGGA
Sbjct: 606 MMDEINLNGAANGGNNSDDEVVVGEDEELDESKNTMNDTSSSSTNFFSGLPGSNSGNGGA 665

Query: 61  MNFESENTSASHDTGFFRFEASDKEGSYGDRPMPDWVGWGEPSDMQVGNSSTNPFVDHDE 120
           +NFESEN SA++D GFFRFEASDKE S+GDRP+PDWVGWGEPSDMQV  +S NPFVDHDE
Sbjct: 666 LNFESENASAANDMGFFRFEASDKEESFGDRPLPDWVGWGEPSDMQVTGASMNPFVDHDE 725

Query: 121 SGNNLSSKPELGXXXXXXXXXGETVSSNGLPSTIDSMEGIVESSQRSGAVPSLFEEDVEF 180
           S  NLS+KP++G          E+V SNG P++ D ++G+ +S+QRS AVPSLFEEDVEF
Sbjct: 726 SCGNLSTKPQIGSPNSSSPK-AESVLSNGSPTSKDLIDGVGDSTQRSAAVPSLFEEDVEF 784

Query: 181 VGVELEGTEKAMDQALKEGIVGEAGPLKRNMVPKVAEKENSEEGGAGVKEFNDTNYWRVD 240
           VGVELEGTEKAM+QALKEGIVGEAGPLKRN+ PK AEKEN+E+   G+KEFND NYWRVD
Sbjct: 785 VGVELEGTEKAMEQALKEGIVGEAGPLKRNVSPKAAEKENAEDSNPGMKEFNDANYWRVD 844

Query: 241 QEVAVLE 247
           QEVA LE
Sbjct: 845 QEVAALE 851


>Medtr2g094550.2 | SIT4 phosphatase-associated family protein | HC |
           chr2:40333185-40342415 | 20130731
          Length = 850

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 160/247 (64%), Positives = 185/247 (74%), Gaps = 1/247 (0%)

Query: 1   MMDEINLXXXXXXXXXXXXXXXXXXXXXXXXXKNTLNGTSSSNTDFISGSTDSNSMNGGA 60
           MMDEINL                         KNT+N TSSS+T+F SG   SNS NGGA
Sbjct: 605 MMDEINLNGAANGGNNSDDEVVVGEDEELDESKNTMNDTSSSSTNFFSGLPGSNSGNGGA 664

Query: 61  MNFESENTSASHDTGFFRFEASDKEGSYGDRPMPDWVGWGEPSDMQVGNSSTNPFVDHDE 120
           +NFESEN SA++D GFFRFEASDKE S+GDRP+PDWVGWGEPSDMQV  +S NPFVDHDE
Sbjct: 665 LNFESENASAANDMGFFRFEASDKEESFGDRPLPDWVGWGEPSDMQVTGASMNPFVDHDE 724

Query: 121 SGNNLSSKPELGXXXXXXXXXGETVSSNGLPSTIDSMEGIVESSQRSGAVPSLFEEDVEF 180
           S  NLS+KP++G          E+V SNG P++ D ++G+ +S+QRS AVPSLFEEDVEF
Sbjct: 725 SCGNLSTKPQIGSPNSSSPK-AESVLSNGSPTSKDLIDGVGDSTQRSAAVPSLFEEDVEF 783

Query: 181 VGVELEGTEKAMDQALKEGIVGEAGPLKRNMVPKVAEKENSEEGGAGVKEFNDTNYWRVD 240
           VGVELEGTEKAM+QALKEGIVGEAGPLKRN+ PK AEKEN+E+   G+KEFND NYWRVD
Sbjct: 784 VGVELEGTEKAMEQALKEGIVGEAGPLKRNVSPKAAEKENAEDSNPGMKEFNDANYWRVD 843

Query: 241 QEVAVLE 247
           QEVA LE
Sbjct: 844 QEVAALE 850