Miyakogusa Predicted Gene

Lj0g3v0068109.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068109.1 Non Characterized Hit- tr|D8T2Y9|D8T2Y9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,42.98,2e-18,P-loop containing nucleoside triphosphate
hydrolases,NULL; AAA_19,NULL; no description,NULL; SUBFAMI,CUFF.3238.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC | chr1:147422...   182   9e-47

>Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC |
           chr1:14742280-14736383 | 20130731
          Length = 914

 Score =  182 bits (461), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 85/107 (79%), Positives = 96/107 (89%)

Query: 1   MLLQKNGLRKKNPSISVVATLFGDGEDVAWLEKNDLADWAEESFNGILGSETFDNSQQRT 60
           MLLQKNGL+KKNPSISVVATLFG+ ED AWLEKN L +W EE  NG LGSE+FD SQQR 
Sbjct: 387 MLLQKNGLQKKNPSISVVATLFGEAEDAAWLEKNSLVNWEEEKTNGALGSESFDKSQQRA 446

Query: 61  IALGLNKRRPVLVIEGPPGSGKSGLLKQLIVCAVQQGERVLVTAPTN 107
           IALGLNK+RP+LVI+GPPG+GK+GLLKQ+I CAV+QGERVLVTAPTN
Sbjct: 447 IALGLNKKRPLLVIQGPPGTGKTGLLKQIITCAVEQGERVLVTAPTN 493