Miyakogusa Predicted Gene

Lj0g3v0067619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0067619.1 Non Characterized Hit- tr|I1JZR4|I1JZR4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,50.71,5e-17,seg,NULL,FS347642.path1.1
         (111 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107970.1 | WRKY family transcription factor | HC | chr4:4...    63   7e-11
Medtr4g107970.2 | WRKY family transcription factor | HC | chr4:4...    62   9e-11

>Medtr4g107970.1 | WRKY family transcription factor | HC |
           chr4:44750401-44754733 | 20130731
          Length = 613

 Score = 62.8 bits (151), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/116 (47%), Positives = 63/116 (54%), Gaps = 22/116 (18%)

Query: 14  QSETVSAATKAITAHPNFQSALAAALTSFIGSSNTPG--------NLGHKMTWAELFPAA 65
           Q  T+SAATKAITA P FQSALAAAL+S IG++   G        NL  KM WAE+F  +
Sbjct: 493 QDSTISAATKAITADPTFQSALAAALSSLIGNTTNQGNQNQSAGENLSQKMKWAEMFQVS 552

Query: 66  SNSTATLPSTSKASASNFFNKTP--------------SSLPFSTPKSASASPGDSN 107
           S S  +  S     AS+F NKT                SLPFS  KSAS SPG  N
Sbjct: 553 STSLPSSSSKVNGCASSFLNKTAPVNNTQNGSLMLLSPSLPFSATKSASTSPGGDN 608


>Medtr4g107970.2 | WRKY family transcription factor | HC |
           chr4:44750401-44754733 | 20130731
          Length = 536

 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/121 (47%), Positives = 68/121 (56%), Gaps = 23/121 (19%)

Query: 14  QSETVSAATKAITAHPNFQSALAAALTSFIGSSNTPG--------NLGHKMTWAELFPAA 65
           Q  T+SAATKAITA P FQSALAAAL+S IG++   G        NL  KM WAE+F  +
Sbjct: 416 QDSTISAATKAITADPTFQSALAAALSSLIGNTTNQGNQNQSAGENLSQKMKWAEMFQVS 475

Query: 66  SNSTATLPSTSKASASNFFNKTP--------------SSLPFSTPKSASASP-GDSNGNT 110
           S S  +  S     AS+F NKT                SLPFS  KSAS SP GD++ NT
Sbjct: 476 STSLPSSSSKVNGCASSFLNKTAPVNNTQNGSLMLLSPSLPFSATKSASTSPGGDNSDNT 535

Query: 111 D 111
           +
Sbjct: 536 N 536