Miyakogusa Predicted Gene

Lj0g3v0067009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0067009.1 tr|G7K3B3|G7K3B3_MEDTR CCP OS=Medicago truncatula
GN=MTR_5g090940 PE=4 SV=1,57.63,0.000000007, ,CUFF.3161.1
         (83 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g090940.1 | disease resistance protein (TIR-NBS-LRR class)...    65   2e-11

>Medtr5g090940.1 | disease resistance protein (TIR-NBS-LRR class) | HC
            | chr5:39619088-39625198 | 20130731
          Length = 1651

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 3/59 (5%)

Query: 25   DMDKEGCESVTK---LAAVLKRKGEELSGLYDAEIESFQNSQESHDLMSATYLNAGAEG 80
            ++ KE C+ V K   LAAVLK +GEEL+ LYDAEIE  QNS+E  DLMSA YL+   +G
Sbjct: 1508 NIGKESCKDVIKHKKLAAVLKERGEELTSLYDAEIEQLQNSEEIQDLMSAIYLSGLKDG 1566



 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 36/60 (60%)

Query: 21   LALEDMDKEGCESVTKLAAVLKRKGEELSGLYDAEIESFQNSQESHDLMSATYLNAGAEG 80
            +A  D  K+G     KLA VLK + EEL   YDA IE F+NS+E  DLM+ATY N    G
Sbjct: 1358 IATMDNSKKGHILNEKLADVLKGRAEELQRFYDAGIEGFKNSKEIQDLMTATYSNGMRNG 1417