Miyakogusa Predicted Gene

Lj0g3v0066949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0066949.1 Non Characterized Hit- tr|I1H847|I1H847_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,45.95,5e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Protein of
unknown function DUF647,CUFF.3152.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g044720.1 | UPF0420 C16orf58-like protein | HC | chr5:1963...   210   3e-55

>Medtr5g044720.1 | UPF0420 C16orf58-like protein | HC |
           chr5:19633846-19624339 | 20130731
          Length = 771

 Score =  210 bits (534), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 103/127 (81%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MQLTSWSSKKAYSLDKKVHLGTRISSFDNMEIKEHLLSAASYYTKAKYLLVERKGMINVI 60
           +QLTS SSKK  SLD KV LGTRISSFD MEIKEHLLS ASYY KAKY+LVE+KG+I+VI
Sbjct: 632 IQLTSMSSKKVNSLDSKVRLGTRISSFDEMEIKEHLLSLASYYAKAKYILVEKKGIIDVI 691

Query: 61  VHKDTNAVDVLRSFVHALVLANNVHKIKSLHSEGQMWMENQYEVFIQKLKSLGWKTERLL 120
           VHKD+++ DVL+SF+HALVLANNV+K KSLHS+ QMWMENQYEVFIQKLKSLGWKTERLL
Sbjct: 692 VHKDSSSADVLKSFIHALVLANNVYKGKSLHSDSQMWMENQYEVFIQKLKSLGWKTERLL 751

Query: 121 -SPIIWR 126
            SPIIWR
Sbjct: 752 SSPIIWR 758