Miyakogusa Predicted Gene
- Lj0g3v0066839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0066839.1 Non Characterized Hit- tr|I1JLP8|I1JLP8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.12,0,seg,NULL;
Rhomboid-like,NULL; SUBFAMILY NOT NAMED,NULL;
RHOMBOID-RELATED,Peptidase S54, rhomboid; no,CUFF.3154.1
(388 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g021755.1 | inactive rhomboid-like protein | HC | chr4:721... 424 e-119
Medtr2g097210.1 | inactive rhomboid-like protein | HC | chr2:415... 356 2e-98
Medtr7g061780.1 | S54 family peptidase | HC | chr7:22356603-2235... 325 4e-89
Medtr7g498280.1 | inactive rhomboid-like protein | HC | chr7:392... 287 1e-77
Medtr2g097210.2 | inactive rhomboid-like protein | HC | chr2:415... 263 2e-70
Medtr1g101310.1 | inactive rhomboid-like protein | HC | chr1:457... 257 1e-68
Medtr2g103600.1 | S54 family peptidase | HC | chr2:44609705-4460... 213 3e-55
Medtr3g073530.1 | inactive rhomboid-like protein | HC | chr3:331... 195 6e-50
Medtr2g088290.1 | S54 family peptidase | LC | chr2:37206799-3720... 88 1e-17
Medtr2g088315.1 | S54 family peptidase | LC | chr2:37209285-3720... 79 6e-15
>Medtr4g021755.1 | inactive rhomboid-like protein | HC |
chr4:7215110-7210484 | 20130731
Length = 399
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/350 (61%), Positives = 239/350 (68%), Gaps = 15/350 (4%)
Query: 1 MAGVPPPLGMNSRRNSNNTMVHPMEVVTDPSPQGGAATIPIQY--YREEKHDKNWWSWLX 58
MA PPL ++S N+NN MVHP+ ++P+ + RE KH K W+ WL
Sbjct: 1 MAQEQPPLQIHSTTNNNNNMVHPV-------------SLPVHHNHAREVKHYKKWFPWLL 47
Query: 59 XXXXXXXXXXXXXTMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSLTLQKMGALD 118
TMYVNNCPKNSVSC+ARFL RF+FQP KENPLLGPSSLTLQKMGALD
Sbjct: 48 PFFVVANIVVFVITMYVNNCPKNSVSCIARFLKRFAFQPLKENPLLGPSSLTLQKMGALD 107
Query: 119 VNRVVHRHQGWRLISCMWLHAGVVHLLSNMLGILFIGIRLEQEFGFVLIGLLFVISGFGG 178
V++VVH HQGWRLI+CMWLH GV HLL+NMLGILFIGIRLEQEFGFVLIGLLFVISGFGG
Sbjct: 108 VDKVVHGHQGWRLITCMWLHGGVFHLLANMLGILFIGIRLEQEFGFVLIGLLFVISGFGG 167
Query: 179 SLLSALFIQSNISVXXXXXXXXXXXXXXXELITNWSMYDNKFPALFTLVLIIVVNLALGI 238
SLLSALFIQSNISV ELITNWSMYDNK ALFTLV+IIVVNLA+GI
Sbjct: 168 SLLSALFIQSNISVGASGALFGLLGAMLSELITNWSMYDNKIAALFTLVIIIVVNLAIGI 227
Query: 239 LPHVDNFAHIXXXXXXXXXXXXXXIRPQLQLVNQRYAPLQYSPGRPKRKFKTYQCXXXXX 298
LPHVDNFAHI IRPQ VNQRYA ++YSP R KFK YQC
Sbjct: 228 LPHVDNFAHIGGFLAGFLLGFVFLIRPQFGWVNQRYARVEYSPTRATPKFKKYQCILWVL 287
Query: 299 XXXXXXXXXXXXXXXXXRGVDANDHCSWCHYMSCVPTSRWSCRTEAAYCL 348
G+DANDHCSWCHY+SCVPTS+W+C TEAAYCL
Sbjct: 288 SLIILIVGLSGGLVALLSGIDANDHCSWCHYLSCVPTSKWNCHTEAAYCL 337
>Medtr2g097210.1 | inactive rhomboid-like protein | HC |
chr2:41509279-41506033 | 20130731
Length = 383
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 226/346 (65%), Gaps = 3/346 (0%)
Query: 45 REEKHDKNWWSWLXXXXXXXXXXXXXXTMYVNNCPKNSV--SCVARFLGRFSFQPFKENP 102
R+ + K W WL TMYVN+CP+N+ +CVA FLGRFSFQP KENP
Sbjct: 36 RDFRLFKQWVPWLIPTFVFANVVVFIFTMYVNDCPENAFHGTCVAPFLGRFSFQPLKENP 95
Query: 103 LLGPSSLTLQKMGALDVNRVVHRHQGWRLISCMWLHAGVVHLLSNMLGILFIGIRLEQEF 162
L GPSS TLQKMGAL+V++VVH H+GWRL+SC+WLH G +H+L+NML +LFIGIRLEQEF
Sbjct: 96 LFGPSSFTLQKMGALEVDKVVHEHEGWRLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEF 155
Query: 163 GFVLIGLLFVISGFGGSLLSALFIQSNISVXXXXXXXXXXXXXXXELITNWSMYDNKFPA 222
GFV IG L+VISGFGGSLLS+LFIQ+ ISV EL NW++Y NK A
Sbjct: 156 GFVRIGFLYVISGFGGSLLSSLFIQTGISVGASGALFGLLGGMLSELFINWTIYANKMAA 215
Query: 223 LFTLVLIIVVNLALGILPHVDNFAHIXXXXXXXXXXXXXXIRPQLQLVNQRYAPL-QYSP 281
L TL++I+V+NLA+G+LPHVDNFAH+ IRPQ + ++Q+ + ++
Sbjct: 216 LLTLIIIVVINLAVGVLPHVDNFAHLGGFGSGFFLGFVVLIRPQFKWISQQQSKSGSHAF 275
Query: 282 GRPKRKFKTYQCXXXXXXXXXXXXXXXXXXXXXXRGVDANDHCSWCHYMSCVPTSRWSCR 341
+ K+ YQ RGV+ N+ CSWCHY+SCVPTS+WSC+
Sbjct: 276 SVKQNKYLPYQYVLWVLSFLLLIAGFIAGMVLLFRGVNLNERCSWCHYLSCVPTSKWSCQ 335
Query: 342 TEAAYCLSDQLGNQLNVTCSSNGKSSIYYMQDPTSSQIQQLCTQLC 387
++ YC + + GNQLN+TC SNG+S IY + + +SS QQLC+QLC
Sbjct: 336 EQSIYCETTEFGNQLNITCMSNGRSDIYPLSNTSSSDRQQLCSQLC 381
>Medtr7g061780.1 | S54 family peptidase | HC |
chr7:22356603-22354034 | 20130731
Length = 335
Score = 325 bits (834), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 164/288 (56%), Positives = 186/288 (64%), Gaps = 1/288 (0%)
Query: 44 YREEKHDKNWWSWLXXXXXXXXXXXXXXTMYVNNCPKNSVSCVARFLGRFSFQPFKENPL 103
Y+E KH K W WL TMY N+CP NSV C+ARFLGRFSFQPF ENPL
Sbjct: 17 YKEMKHFKKWIPWLIPFFVIVNVIVFIITMYENDCPNNSVVCIARFLGRFSFQPFHENPL 76
Query: 104 LGPSSLTLQKMGALDVNRVVHRHQGWRLISCMWLHAGVVHLLSNMLGILFIGIRLEQEFG 163
LGPS LTL MGALDV++VV+RHQGWRL++CMWLH GV HLL+NMLGIL +GIRLEQ+FG
Sbjct: 77 LGPSLLTLTSMGALDVHQVVYRHQGWRLMTCMWLHGGVFHLLANMLGILVVGIRLEQDFG 136
Query: 164 FVLIGLLFVISGFGGSLLSALFIQSNISVXXXXXXXXXXXXXXXELITNWSMYDNKFPAL 223
FVLIG+L+VISGFGGSLLS+LFIQ ISV ELITNWS+Y+ + L
Sbjct: 137 FVLIGVLYVISGFGGSLLSSLFIQQRISVGASSALFGLLGAMLSELITNWSIYEKRLGTL 196
Query: 224 FTLVLIIVVNLALGILPHVDNFAHIXXXXXXXXXXXXXXIRPQLQLVNQRYAPLQYSPGR 283
TLV IIV+NLA+GI PHVDNFAHI IRPQ + Q+YA Y P
Sbjct: 197 ITLVSIIVINLAVGIFPHVDNFAHIGGFISGFLLGFVFLIRPQFGWIKQKYATPAY-PSL 255
Query: 284 PKRKFKTYQCXXXXXXXXXXXXXXXXXXXXXXRGVDANDHCSWCHYMS 331
K KFK YQC RGVDANDHCSWCHY+S
Sbjct: 256 VKSKFKIYQCISWLLALILLIVGFTLGLVALLRGVDANDHCSWCHYLS 303
>Medtr7g498280.1 | inactive rhomboid-like protein | HC |
chr7:39278810-39283545 | 20130731
Length = 326
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/295 (48%), Positives = 182/295 (61%), Gaps = 7/295 (2%)
Query: 50 DKNWWSWLXXXXXXXXXXXXXXTMYVNNCPKNSV----SCVARFLGRFSFQPFKENPLLG 105
+ +W SWL MY+NNCP ++ +CV +FLGRFSFQP KENPLLG
Sbjct: 32 ETSWTSWLVPMFVVANLVVFVVAMYINNCPSKNLGFDGACVLKFLGRFSFQPLKENPLLG 91
Query: 106 PSSLTLQKMGALDVNRVVHRHQGWRLISCMWLHAGVVHLLSNMLGILFIGIRLEQEFGFV 165
PSS TL KMGAL + VV+ HQGWRL+SC+WLHAG++HL +NM+ ++FIGIRLEQ+FGFV
Sbjct: 92 PSSETLTKMGALKWDAVVNHHQGWRLVSCIWLHAGIIHLAANMISLVFIGIRLEQQFGFV 151
Query: 166 LIGLLFVISGFGGSLLSALFIQSNISVXXXXXXXXXXXXXXXELITNWSMYDNKFPALFT 225
IG+++++SGFGGS+LSALFI+ +ISV ELITNWS+Y NK AL T
Sbjct: 152 RIGIVYLVSGFGGSILSALFIRKSISVGASGALFGLLGAMLSELITNWSIYTNKVAALMT 211
Query: 226 LVLIIVVNLALGILPHVDNFAHIXXXXXXXXXXXXXXIRPQLQLVNQRYAPLQYSPGRPK 285
L+ IIV+NL +G+LPHVDNFAHI RPQ + QR+ P + R K
Sbjct: 212 LLFIIVINLVIGMLPHVDNFAHIGGFLTGFLLGFIFLPRPQFGWLAQRHVP---AGVRLK 268
Query: 286 RKFKTYQCXXXXXXXXXXXXXXXXXXXXXXRGVDANDHCSWCHYMSCVPTSRWSC 340
K+K YQ RG DHC WCHY++CVPTS+W C
Sbjct: 269 SKYKVYQYVLWVVSLVLLIAGLCIGLVMLLRGESGYDHCHWCHYLTCVPTSKWKC 323
>Medtr2g097210.2 | inactive rhomboid-like protein | HC |
chr2:41509232-41506033 | 20130731
Length = 300
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/231 (55%), Positives = 160/231 (69%), Gaps = 2/231 (0%)
Query: 45 REEKHDKNWWSWLXXXXXXXXXXXXXXTMYVNNCPKNSV--SCVARFLGRFSFQPFKENP 102
R+ + K W WL TMYVN+CP+N+ +CVA FLGRFSFQP KENP
Sbjct: 36 RDFRLFKQWVPWLIPTFVFANVVVFIFTMYVNDCPENAFHGTCVAPFLGRFSFQPLKENP 95
Query: 103 LLGPSSLTLQKMGALDVNRVVHRHQGWRLISCMWLHAGVVHLLSNMLGILFIGIRLEQEF 162
L GPSS TLQKMGAL+V++VVH H+GWRL+SC+WLH G +H+L+NML +LFIGIRLEQEF
Sbjct: 96 LFGPSSFTLQKMGALEVDKVVHEHEGWRLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEF 155
Query: 163 GFVLIGLLFVISGFGGSLLSALFIQSNISVXXXXXXXXXXXXXXXELITNWSMYDNKFPA 222
GFV IG L+VISGFGGSLLS+LFIQ+ ISV EL NW++Y NK A
Sbjct: 156 GFVRIGFLYVISGFGGSLLSSLFIQTGISVGASGALFGLLGGMLSELFINWTIYANKMAA 215
Query: 223 LFTLVLIIVVNLALGILPHVDNFAHIXXXXXXXXXXXXXXIRPQLQLVNQR 273
L TL++I+V+NLA+G+LPHVDNFAH+ IRPQ + ++Q+
Sbjct: 216 LLTLIIIVVINLAVGVLPHVDNFAHLGGFGSGFFLGFVVLIRPQFKWISQQ 266
>Medtr1g101310.1 | inactive rhomboid-like protein | HC |
chr1:45761926-45764419 | 20130731
Length = 319
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/308 (44%), Positives = 175/308 (56%), Gaps = 20/308 (6%)
Query: 44 YREEKHDKNWWSWLXXXXXXXXXXXXXXTMYVNNCP-------KNSVSCVARFLGRFSFQ 96
Y E H ++ SWL M +NNCP K+ CVARFL RFSFQ
Sbjct: 25 YVAETHRESC-SWLVPAFVFVNIVVFIVVMGINNCPNTTFGFHKHHHHCVARFLHRFSFQ 83
Query: 97 PFKENPLLGPSSLTLQKMGALDVNRVVHRHQGWRLISCMWLHAGVVHLLSNMLGILFIGI 156
PF+ENPLLGPSSLTL KMGAL VVH+HQ WRL +C+WLHAG++HLLSNML ++ IGI
Sbjct: 84 PFRENPLLGPSSLTLIKMGALRWVNVVHQHQEWRLFTCIWLHAGIIHLLSNMLCLVLIGI 143
Query: 157 RLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNISVXXXXXXXXXXXXXXXELITNWSMY 216
RLEQ+FGFV IGL++++SGFGGS+ S++FI+++ISV EL+TNW++Y
Sbjct: 144 RLEQQFGFVKIGLIYLLSGFGGSVFSSIFIRNSISVGASSALFGLLGAMISELLTNWTIY 203
Query: 217 DNKFPALFTLVLIIVVNLALGILPHVDNFAHIXXXXXXXXXXXXXXIRPQLQLVNQRYAP 276
NK AL TL+++I +NL +G+LP VDN AHI RP
Sbjct: 204 SNKVMALLTLLVMIAINLTIGLLPRVDNLAHIGGLVVGFLLGFILLPRP----------- 252
Query: 277 LQYSPGRPKRKFKTYQCXXXXXXXXXXXXXXXXXXXXXXRGVDANDHCSWCHYMSCVPTS 336
QY K K+ YQ RG + DHC WCHY++CVP+S
Sbjct: 253 -QYDGVLRKSKYNAYQFVLGIVSLVLLTAGLSFGLVMLFRGENGYDHCHWCHYLTCVPSS 311
Query: 337 RWSCRTEA 344
RW C +
Sbjct: 312 RWECNSNT 319
>Medtr2g103600.1 | S54 family peptidase | HC |
chr2:44609705-44607548 | 20130731
Length = 316
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 154/248 (62%), Gaps = 9/248 (3%)
Query: 53 WWSWLXXXXXXXXXXXXXXTMYVNNCPK--NSVSCV-ARFLGRFSFQPFKENPLLGPSSL 109
W+SWL +MY+N+CP N C+ ++LG+FSFQPF ENPLLGPS
Sbjct: 31 WFSWLVPLFFLANIAMFVYSMYINDCPGYLNEDDCLWYQYLGKFSFQPFNENPLLGPSVR 90
Query: 110 TLQKMGALDVNRVVHRHQGWRLISCMWLHAGVVHLLSNMLGILFIGIRLEQEFGFVLIGL 169
TL+ +GAL+ + VV ++ WR I+CM+LHAGV+HLL+NM +LFIG+RLE EFGF+ IG+
Sbjct: 91 TLRVLGALERDLVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLKIGV 150
Query: 170 LFVISGFGGSLLSALFIQ-----SNISVXXXXXXXXXXXXXXXELITNWSMYDNKFPALF 224
L+++SGFGGSLLS L + + +SV EL+TNW++Y NK AL
Sbjct: 151 LYLLSGFGGSLLSILHMGDVKAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKCAALT 210
Query: 225 TLVLIIVVNLALGILPHVDNFAHIXXXXXXXXXXXXXXIRPQLQLVNQRYAPLQYSPGRP 284
+L+LII +NLA+G +PHVDN AHI +RPQ VN +Y P Y R
Sbjct: 211 SLLLIIGLNLAVGFIPHVDNSAHIGGFLSGFFLGFVILMRPQFGYVNNKYIPPGYDAKR- 269
Query: 285 KRKFKTYQ 292
K K+K YQ
Sbjct: 270 KSKYKGYQ 277
>Medtr3g073530.1 | inactive rhomboid-like protein | HC |
chr3:33161562-33158511 | 20130731
Length = 379
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 165/338 (48%), Gaps = 5/338 (1%)
Query: 55 SWLXXXXXXXXXXXXXXTMYVNNCPKNS-VSCVARFLGRFSFQPFKENPLLGPSSLTLQK 113
+W+ TM VN+C NS C LGRFSFQP ENPLLGPS L +
Sbjct: 42 TWVISVMVLIQLGFFIATMLVNDCFTNSHGDCTFPSLGRFSFQPLAENPLLGPSMSKLDE 101
Query: 114 MGALDVNRVVHRHQGWRLISCMWLHAGVVHLLSNMLGILFIGIRLEQEFGFVLIGLLFVI 173
MGAL N + RHQ WRL + +LHAG+ HL+ N+ ++++GIRLEQEFG + IG+++++
Sbjct: 102 MGALQKNFLTERHQTWRLFTFPFLHAGLFHLVINLCSVIYVGIRLEQEFGPLRIGIVYIL 161
Query: 174 SGFGGSLLSALFIQSNISVXXXXXXXXXXXXXXXELITNWSMYDNKFPALFTLVLIIVVN 233
S F G+L+++LF+Q+ V EL+ NW + K + + V I V N
Sbjct: 162 SAFVGALMASLFLQNIPVVGSSGALFGLLGALLSELVWNWKYHTKKISEVASFVFIFVCN 221
Query: 234 LALGILPHVDNFAHIXXXXXXXXXXXXXXIRPQLQLVN-QRYAPLQY---SPGRPKRKFK 289
LG LP+VDNF+ I PQ Q V + + Y S + K K K
Sbjct: 222 FLLGFLPYVDNFSSIGGFISGFLLGTVLLFAPQFQQVTPSKGDQIDYDLKSYIKLKLKQK 281
Query: 290 TYQCXXXXXXXXXXXXXXXXXXXXXXRGVDANDHCSWCHYMSCVPTSRWSCRTEAAYCLS 349
+ G++ N +C+WC Y+ C+P + W C+ +C +
Sbjct: 282 LDRPVSRIVSLILFTLLLAGCLLAVLYGININSYCTWCPYVDCIPFTSWHCKDRETFCET 341
Query: 350 DQLGNQLNVTCSSNGKSSIYYMQDPTSSQIQQLCTQLC 387
L +TC NG +++ + + ++I LC +C
Sbjct: 342 MVSNAHLTMTCLGNGNFKVFHYTNISRARINDLCNLIC 379
>Medtr2g088290.1 | S54 family peptidase | LC |
chr2:37206799-37206087 | 20130731
Length = 220
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 108/267 (40%), Gaps = 58/267 (21%)
Query: 73 MYVNNCPKNSV-SCVARFLGRFSFQPFKENPLLGPSSLTLQKMGALDVNRVVHRHQGWRL 131
MY NCP + SC+A FLG SFQP +NPLLG S LTL KMG + + H
Sbjct: 1 MYEYNCPSIAPHSCLASFLGILSFQPITQNPLLGSSPLTLVKMGTMYFKKSDRLHH---- 56
Query: 132 ISCMWLHAGVVHLLSNMLGILFIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNIS 191
++FG+V I +L +SG G SL SALFI +++S
Sbjct: 57 ----------------------------KKFGYVRIEILHTMSGMGSSLFSALFIPTSVS 88
Query: 192 VXXXXXXXXXXXXXXXELITNWSMYDNKFPALFTLVLIIVVNLALG-ILPHVDNFAHIXX 250
V +LI M+ NK +++TL+ I++ L I+ +NF I
Sbjct: 89 VGVSGAIMGLVGGTLSDLI----MHPNK--SIWTLIGAIIIRSGLVLIISQANNFGIIGG 142
Query: 251 XXXXXXXXXXXXIRPQLQLVNQRYAPLQYSPGRPKRKFKTYQCXXXXXXXXXXXXXXXXX 310
I + + R+AP Q + T +
Sbjct: 143 LITEILLGYVLLISRK----HSRFAPCQQALRVNSSVLLTIR--------------LMGG 184
Query: 311 XXXXXRGVDANDHCSWCHYMSCVPTSR 337
+GV +DHCSW HY+ CVP R
Sbjct: 185 MVLFLKGVAMSDHCSWYHYLRCVPIKR 211
>Medtr2g088315.1 | S54 family peptidase | LC |
chr2:37209285-37209034 | 20130731
Length = 83
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 114 MGALDVNRVVHRHQGWRLISCMWLHAGVVHLLSNMLGILFIGIRLEQEFGFVLIGLLFVI 173
MGA+ + H +RL +C+WLHAGV+ LL NML IL+ I LE++FG++ I +L +
Sbjct: 1 MGAMYFQKSDRLHHAYRLFTCLWLHAGVIDLLLNMLNILYYYIYLEKKFGYIRIAILHTM 60
Query: 174 SGFGGSLLSALFIQSNISV 192
SG G +L SAL I +++SV
Sbjct: 61 SGMGSNLFSALCIPTSVSV 79