Miyakogusa Predicted Gene

Lj0g3v0066429.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0066429.2 tr|D5C1T7|D5C1T7_NITHN Transaldolase
OS=Nitrosococcus halophilus (strain Nc4) GN=Nhal_1585 PE=3
SV=1,48.81,2e-16,no description,Aldolase-type TIM barrel;
Transaldolase,Transaldolase; Aldolase,NULL,CUFF.3123.2
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g096130.1 | transaldolase family protein | HC | chr8:40093...   140   3e-34
Medtr7g006560.1 | transaldolase family protein | HC | chr7:74560...   133   3e-32
Medtr7g006560.2 | transaldolase family protein | HC | chr7:74560...   133   3e-32

>Medtr8g096130.1 | transaldolase family protein | HC |
           chr8:40093835-40090428 | 20130731
          Length = 415

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)

Query: 1   MRASINVKNPAYPDTSYVESLIGPDTISTMPSQ-AFQAFMDHGVLSRTIDTKVSEAQGIY 59
           M AS NVKN AY DT YV SLIGPDTISTMP + A +AFMDHG+LSRT+D KVSEAQ IY
Sbjct: 309 MWASTNVKNSAYSDTFYVNSLIGPDTISTMPPEPALKAFMDHGILSRTLDAKVSEAQSIY 368

Query: 60  NAIEKLGIDWNAVGSQLEHEVIDSFTKSL 88
           N IEKLGIDW+ VGSQLEHE++DSFT+S 
Sbjct: 369 NEIEKLGIDWSGVGSQLEHEILDSFTRSF 397


>Medtr7g006560.1 | transaldolase family protein | HC |
           chr7:745608-740087 | 20130731
          Length = 443

 Score =  133 bits (335), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/88 (69%), Positives = 73/88 (82%)

Query: 1   MRASINVKNPAYPDTSYVESLIGPDTISTMPSQAFQAFMDHGVLSRTIDTKVSEAQGIYN 60
           + AS +VKNPAYPDT YV  LIGPDT+STMP QA QAF+DHG ++RTID+  SEA+GIYN
Sbjct: 337 LWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFIDHGAVARTIDSNASEAEGIYN 396

Query: 61  AIEKLGIDWNAVGSQLEHEVIDSFTKSL 88
           AI+KLGIDW+ VGSQLE E +DSF K+ 
Sbjct: 397 AIQKLGIDWSYVGSQLELEGVDSFKKAF 424


>Medtr7g006560.2 | transaldolase family protein | HC |
           chr7:745608-740080 | 20130731
          Length = 443

 Score =  133 bits (335), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/88 (69%), Positives = 73/88 (82%)

Query: 1   MRASINVKNPAYPDTSYVESLIGPDTISTMPSQAFQAFMDHGVLSRTIDTKVSEAQGIYN 60
           + AS +VKNPAYPDT YV  LIGPDT+STMP QA QAF+DHG ++RTID+  SEA+GIYN
Sbjct: 337 LWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFIDHGAVARTIDSNASEAEGIYN 396

Query: 61  AIEKLGIDWNAVGSQLEHEVIDSFTKSL 88
           AI+KLGIDW+ VGSQLE E +DSF K+ 
Sbjct: 397 AIQKLGIDWSYVGSQLELEGVDSFKKAF 424