Miyakogusa Predicted Gene

Lj0g3v0065739.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0065739.2 Non Characterized Hit- tr|I1HH80|I1HH80_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,49.51,5e-19,seg,NULL; HMA_2,Heavy metal-associated domain, HMA; GB
DEF: HYPOTHETICAL PROTEIN AT2G37390,NULL; COP,CUFF.3058.2
         (230 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g062450.1 | heavy-metal-associated domain protein | HC | c...   228   4e-60
Medtr1g067560.1 | copper chaperone | HC | chr1:29144569-29146076...   115   3e-26
Medtr7g100450.1 | copper chaperone | HC | chr7:40453042-40454776...   104   7e-23
Medtr6g086020.1 | heavy metal transport/detoxification superfami...    72   6e-13
Medtr8g103820.1 | heavy metal transport/detoxification superfami...    72   6e-13
Medtr7g100450.2 | copper chaperone | HC | chr7:40453042-40454776...    65   4e-11
Medtr7g013660.1 | copper chaperone | HC | chr7:3949006-3946807 |...    59   4e-09
Medtr4g094280.1 | heavy-metal-associated domain protein | HC | c...    57   1e-08
Medtr1g082650.1 | heavy-metal-associated domain protein | HC | c...    53   2e-07
Medtr1g092670.1 | copper chaperone | HC | chr1:41728751-41726269...    52   4e-07

>Medtr4g062450.1 | heavy-metal-associated domain protein | HC |
           chr4:23207739-23209696 | 20130731
          Length = 240

 Score =  228 bits (581), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 132/224 (58%), Positives = 147/224 (65%), Gaps = 24/224 (10%)

Query: 1   MKRMDLFCSSPASTAVTSSFV-----LHRSRSTKTYDHDRRKTQLH-VPCSSQLPINPKP 54
           MK MD+FCSSP+STA+  S +     L RSR+TK YDH+RRK QLH VPCSSQLPINP P
Sbjct: 1   MKGMDMFCSSPSSTAIIHSSIDQRSILRRSRTTKNYDHERRKNQLHHVPCSSQLPINPMP 60

Query: 55  YFEKHRKSTSSDNKQHNS-ETRRKSSVEVNDLYTQYPITTDSSSRRHLLGDVP--LIDWV 111
           YFEKHRKST+   KQ +S E RRKSS  VND+          SS R+LL D P   IDW+
Sbjct: 61  YFEKHRKSTTDKQKQSSSTEIRRKSSSHVNDM----------SSTRYLLDDAPAPFIDWI 110

Query: 112 SESKKITTM-----ASSPHGAKAKPMVLTRNDSSSAHSKDQVVVLRVSLHCKACVGKVRK 166
           SES K+ +M      S     K     L R  SS   SKDQVVVLRVSLHCKAC GKVRK
Sbjct: 111 SESSKMVSMHDVKDMSLDMKRKNDSHALIRTSSSPLASKDQVVVLRVSLHCKACEGKVRK 170

Query: 167 HISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXXXXXXXXXXQLW 210
           HISKMEGV SF I+M TKKVTIIGDV+PLD           QLW
Sbjct: 171 HISKMEGVRSFTIEMETKKVTIIGDVTPLDVLASVSKVKSAQLW 214


>Medtr1g067560.1 | copper chaperone | HC | chr1:29144569-29146076 |
           20130731
          Length = 261

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 121/251 (48%), Gaps = 44/251 (17%)

Query: 1   MKRMDLFCSSPASTAVTSSFVLHRSRSTKTY--------------DHDRRKTQ--LHVPC 44
           MKRMD+FC+S ASTA+  S       S+ T               +  RR T   +  PC
Sbjct: 1   MKRMDIFCASQASTAICLSMEQASCSSSNTIQLGGKVIDRHNPIINDSRRSTSKTITAPC 60

Query: 45  SS-QLPINPKPYFEKHRKSTS--SDNKQHNS---ETRRKSSVE-VNDLYTQYPI------ 91
           SS QLPI+PK        S+     N ++ +   E ++KS+ E V + Y+   I      
Sbjct: 61  SSSQLPIDPKKKTTSSSSSSKPIGQNMKNGAKVYEQKKKSTEENVTNSYSSKTIDSILKR 120

Query: 92  -----TTDS----SSRRHLLGDVPLIDWVSESKKITTMASSPHGAKAKPMVLTRNDSSSA 142
                 +DS     S R LL D   +D  S+      +         K  V+ +N+++ A
Sbjct: 121 RLVKPNSDSITPHGSTRSLLSDTTFLDGSSDYDSSLVLTKVDD---KKDQVVGQNEANPA 177

Query: 143 ---HSKDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXX 199
               S  QVVVLRVSLHCK C GK+RKHISKM+GVTSFNID   KKVTI+GDV+P     
Sbjct: 178 SKSGSSSQVVVLRVSLHCKGCEGKLRKHISKMQGVTSFNIDFAAKKVTIVGDVTPFSVLA 237

Query: 200 XXXXXXXXQLW 210
                   Q W
Sbjct: 238 SISKVKNAQFW 248


>Medtr7g100450.1 | copper chaperone | HC | chr7:40453042-40454776 |
           20130731
          Length = 286

 Score =  104 bits (259), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 127/272 (46%), Gaps = 62/272 (22%)

Query: 1   MKRMDLFCSSPASTAVT-SSFVLHRSRSTKTYDH------DR-------------RKTQL 40
           MK +++FC+S ASTA+  ++     S S+ T +H      DR             R   +
Sbjct: 1   MKGIEIFCASQASTAICLNTNHASSSSSSNTINHFGGRAIDRHNPIITDPKRTPARDLTV 60

Query: 41  HVPCS-SQLPINPKPYFEKHRKSTSS---DNKQHNS------------ETRRKSSVEVND 84
             P S S LPINPK   EK +K+T+S   D K+ N+             T  K +  + +
Sbjct: 61  TAPSSPSPLPINPKHVHEKAKKNTTSKLSDKKKKNATKSTHDQKKKSTTTTEKVTEHIAN 120

Query: 85  LYTQYPI---------------TTDSSSRRHLLGDVPLIDWVSESKKITTMASSPHGAKA 129
            Y+  P+                T  +S R+LLGD   +D V + + +  +       K 
Sbjct: 121 NYSSKPVDSILRRSWVKPASDLITPPTSSRYLLGDTVSLDGVLDYEPVLGLTKVDDNKKN 180

Query: 130 KPMVLTRND-----------SSSAHSKDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFN 178
             ++    D              + S +QVVVLRVSLHCK C GKVRKH+S+M+GVTSFN
Sbjct: 181 AQVLHEDEDKHSSKQYSSSSVPKSSSTNQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFN 240

Query: 179 IDMVTKKVTIIGDVSPLDXXXXXXXXXXXQLW 210
           ID   KKVT++GDV+PL            Q+W
Sbjct: 241 IDFAAKKVTVVGDVTPLSVMASISKVKTAQIW 272


>Medtr6g086020.1 | heavy metal transport/detoxification superfamily
           protein | HC | chr6:32213294-32211767 | 20130731
          Length = 135

 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 115 KKITTMASSPHGAKAKPMVLTRNDSSSAHSKDQVVVLRVSLHCKACVGKVRKHISKMEGV 174
           KK    + S H  + K +V  +  + +   K Q+V+LRVS+HC  C  KV KHISK+EGV
Sbjct: 34  KKSLISSESDHKLRLKDVVAGKQ-TLAFQLKPQIVILRVSMHCHGCARKVEKHISKLEGV 92

Query: 175 TSFNIDMVTKKVTIIGDVSPLDXXXXXXXXXXXQLW 210
           +S+ +D+ TK V ++GD+ P +           ++W
Sbjct: 93  SSYKVDLDTKMVVVMGDILPFEVLESVSKVKNAEIW 128


>Medtr8g103820.1 | heavy metal transport/detoxification superfamily
           protein | HC | chr8:43696708-43698448 | 20130731
          Length = 132

 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 43/66 (65%)

Query: 145 KDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXXXXXXX 204
           K ++V+LRVS+HC  C  KV KHISK+EGV+S+ +D+ TK V +IGD+ PL+        
Sbjct: 64  KPKMVILRVSMHCHGCARKVEKHISKLEGVSSYKVDLDTKMVAVIGDILPLEVLQSVSKV 123

Query: 205 XXXQLW 210
              Q W
Sbjct: 124 KNAQFW 129


>Medtr7g100450.2 | copper chaperone | HC | chr7:40453042-40454776 |
           20130731
          Length = 247

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 106/236 (44%), Gaps = 62/236 (26%)

Query: 1   MKRMDLFCSSPASTAVT-SSFVLHRSRSTKTYDH------DR-------------RKTQL 40
           MK +++FC+S ASTA+  ++     S S+ T +H      DR             R   +
Sbjct: 1   MKGIEIFCASQASTAICLNTNHASSSSSSNTINHFGGRAIDRHNPIITDPKRTPARDLTV 60

Query: 41  HVPCS-SQLPINPKPYFEKHRKSTSS---DNKQHNS------------ETRRKSSVEVND 84
             P S S LPINPK   EK +K+T+S   D K+ N+             T  K +  + +
Sbjct: 61  TAPSSPSPLPINPKHVHEKAKKNTTSKLSDKKKKNATKSTHDQKKKSTTTTEKVTEHIAN 120

Query: 85  LYTQYPI---------------TTDSSSRRHLLGDVPLIDWVSESKKITTMASSPHGAKA 129
            Y+  P+                T  +S R+LLGD   +D V + + +  +       K 
Sbjct: 121 NYSSKPVDSILRRSWVKPASDLITPPTSSRYLLGDTVSLDGVLDYEPVLGLTKVDDNKKN 180

Query: 130 KPMVLTRND-----------SSSAHSKDQVVVLRVSLHCKACVGKVRKHISKMEGV 174
             ++    D              + S +QVVVLRVSLHCK C GKVRKH+S+M+G+
Sbjct: 181 AQVLHEDEDKHSSKQYSSSSVPKSSSTNQVVVLRVSLHCKGCEGKVRKHLSRMQGM 236


>Medtr7g013660.1 | copper chaperone | HC | chr7:3949006-3946807 |
           20130731
          Length = 126

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 34/50 (68%)

Query: 147 QVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLD 196
           + VVL+V + C  C G V + + KMEGV SF+IDM  +KVT+ G+V P D
Sbjct: 4   ETVVLKVKMSCSGCSGAVNRVLEKMEGVESFDIDMKEQKVTVKGNVKPQD 53


>Medtr4g094280.1 | heavy-metal-associated domain protein | HC |
           chr4:37596187-37594510 | 20130731
          Length = 132

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 14/84 (16%)

Query: 101 LLGDVPLIDWVSESKKITTMASSPHGAKAKPMVLTRNDS-----------SSAHSKDQVV 149
            L D  LI++   SK + +  S+P     K +V  +N S           +S H+  QVV
Sbjct: 47  FLDDTRLINFSKYSKLVESPMSNP---VQKIIVREKNQSYQAIEPRELQKTSTHNVFQVV 103

Query: 150 VLRVSLHCKACVGKVRKHISKMEG 173
           V+RV++HC+ C GKV+KHISKMEG
Sbjct: 104 VMRVAIHCQGCAGKVKKHISKMEG 127


>Medtr1g082650.1 | heavy-metal-associated domain protein | HC |
           chr1:36784577-36787395 | 20130731
          Length = 577

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 33/50 (66%)

Query: 145 KDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           K Q  +L+V++HC+ C  KV+K + K+EGV S NID    KV + GDV P
Sbjct: 8   KIQNCLLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDP 57


>Medtr1g092670.1 | copper chaperone | HC | chr1:41728751-41726269 |
           20130731
          Length = 79

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 34/48 (70%)

Query: 147 QVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           Q V L+V + C+ CVG V++ + K++GV S++ID+  +KV + G+V P
Sbjct: 4   QTVTLKVGMSCEGCVGAVKRVLGKLDGVESYDIDLKEQKVVVKGNVEP 51