Miyakogusa Predicted Gene

Lj0g3v0065729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0065729.1 Non Characterized Hit- tr|I3SJJ0|I3SJJ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,95.12,0,Ribosomal_L29,Ribosomal protein L29; SUBFAMILY NOT
NAMED,NULL; 60S RIBOSOMAL PROTEIN L35,NULL; seg,N,CUFF.3057.1
         (123 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g067490.1 | 60S ribosomal L35-like protein | HC | chr1:291...   181   2e-46
Medtr4g062410.1 | 60S ribosomal L35-like protein | HC | chr4:231...   178   8e-46
Medtr1g115545.1 | 60S ribosomal L35-like protein | HC | chr1:522...   176   4e-45
Medtr4g072410.1 | 60S ribosomal L35-like protein | HC | chr4:274...   162   6e-41
Medtr7g080090.1 | 60S ribosomal L35-like protein | HC | chr7:304...   161   1e-40
Medtr1g105880.1 | 60S ribosomal protein L35 | HC | chr1:47805416...    92   1e-19
Medtr5g045540.1 | 60S ribosomal L35-like protein, putative | LC ...    60   6e-10

>Medtr1g067490.1 | 60S ribosomal L35-like protein | HC |
           chr1:29111688-29109043 | 20130731
          Length = 122

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 100/119 (84%)

Query: 4   IKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 63
           IK++ELR+K+                  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ
Sbjct: 3   IKMFELRSKTKADLLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 62

Query: 64  KQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYAVK 122
           KQKAALRE YKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKE+YFPLRKYA+K
Sbjct: 63  KQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEIYFPLRKYAIK 121


>Medtr4g062410.1 | 60S ribosomal L35-like protein | HC |
           chr4:23174266-23171645 | 20130731
          Length = 123

 Score =  178 bits (452), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 93/122 (76%), Positives = 101/122 (82%)

Query: 1   MARIKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MA +KVYELR K+                  RVAKVTGGAPNKLSKIKVVRL+IAQVLTV
Sbjct: 1   MAGVKVYELRQKTKQDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLNIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
           ISQKQK ALREAYK+KKYLPLDLRPKKTRAIRRRLTKHQ+SLKTEREKKKE+YFP+RKYA
Sbjct: 61  ISQKQKTALREAYKSKKYLPLDLRPKKTRAIRRRLTKHQSSLKTEREKKKEIYFPVRKYA 120

Query: 121 VK 122
           +K
Sbjct: 121 IK 122


>Medtr1g115545.1 | 60S ribosomal L35-like protein | HC |
           chr1:52226656-52228831 | 20130731
          Length = 121

 Score =  176 bits (446), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 98/119 (82%)

Query: 4   IKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 63
           +KV+ELR K+                  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ
Sbjct: 2   VKVHELRQKNKTDLLAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 61

Query: 64  KQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYAVK 122
           KQKAALRE YKNKKYLPLDLRPKKTRAIRRRLTKHQ+SLKTEREKKKE YFP+RKYA+K
Sbjct: 62  KQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQSSLKTEREKKKETYFPMRKYAIK 120


>Medtr4g072410.1 | 60S ribosomal L35-like protein | HC |
           chr4:27454555-27457529 | 20130731
          Length = 121

 Score =  162 bits (410), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 86/118 (72%), Positives = 94/118 (79%)

Query: 5   KVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQK 64
           K YELR K+                  RVAKVTGGAPNK+SKIKVVRL+IAQVLTVISQ 
Sbjct: 3   KTYELRQKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKISKIKVVRLNIAQVLTVISQN 62

Query: 65  QKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYAVK 122
           QK ALR AYK+KKYLPLDLRPKKTRAIRRRLTK+Q SLKT+REKKKE+YFPLRKYA+K
Sbjct: 63  QKTALRAAYKHKKYLPLDLRPKKTRAIRRRLTKNQLSLKTDREKKKEIYFPLRKYAIK 120


>Medtr7g080090.1 | 60S ribosomal L35-like protein | HC |
           chr7:30434335-30433931 | 20130731
          Length = 123

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 94/122 (77%)

Query: 1   MARIKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR K+                  RVAK T  APN LSKIK VRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKTKADLLAQLKDLKAELALLRVAKATRAAPNNLSKIKEVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
           ISQK+KAALRE YKNKKYLP+DLRPKKTRA+RRRLTKHQ+SLKTE EKKKE YF +RKYA
Sbjct: 61  ISQKRKAALREVYKNKKYLPIDLRPKKTRAVRRRLTKHQSSLKTEMEKKKETYFTMRKYA 120

Query: 121 VK 122
           +K
Sbjct: 121 IK 122


>Medtr1g105880.1 | 60S ribosomal protein L35 | HC |
           chr1:47805416-47806017 | 20130731
          Length = 83

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 51/68 (75%), Gaps = 11/68 (16%)

Query: 33  VAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIR 92
           VAKVTGGAPNKLSK           +  ISQKQKAALREAYKN+KYLPLDL PKK RAI 
Sbjct: 24  VAKVTGGAPNKLSK-----------MLSISQKQKAALREAYKNRKYLPLDLHPKKIRAIC 72

Query: 93  RRLTKHQA 100
           RRLTKHQ 
Sbjct: 73  RRLTKHQG 80


>Medtr5g045540.1 | 60S ribosomal L35-like protein, putative | LC |
           chr5:19985753-19985495 | 20130731
          Length = 73

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/35 (82%), Positives = 30/35 (85%)

Query: 67  AALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQAS 101
           AALRE YK KKYLPLDL PKK RAI RRLTKHQ+S
Sbjct: 2   AALREVYKKKKYLPLDLHPKKIRAICRRLTKHQSS 36