Miyakogusa Predicted Gene

Lj0g3v0065599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0065599.1 Non Characterized Hit- tr|I1JGJ4|I1JGJ4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,64.29,3e-16,seg,NULL,CUFF.3047.1
         (74 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g057130.1 | hypothetical protein | HC | chr1:25097782-2510...   102   6e-23

>Medtr1g057130.1 | hypothetical protein | HC |
           chr1:25097782-25109455 | 20130731
          Length = 798

 Score =  102 bits (255), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 50/76 (65%), Positives = 55/76 (72%), Gaps = 2/76 (2%)

Query: 1   MLILAESKDLDCLLSPMIGLYGTGDVT--TNDKTTSKCVDGSIFIRFMPQILNALLKVXX 58
           +LILAESKDLDC LSPMIGLY TG V    N  +TSK  D SIF RFMP+ILNA+LKV  
Sbjct: 427 LLILAESKDLDCFLSPMIGLYQTGVVMLQNNGASTSKSADASIFSRFMPEILNAVLKVLA 486

Query: 59  XXXXXXAMILWHVGWC 74
                 AM+LWHVGWC
Sbjct: 487 FQQSLPAMMLWHVGWC 502