Miyakogusa Predicted Gene

Lj0g3v0065579.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0065579.2 Non Characterized Hit- tr|B9RGV9|B9RGV9_RICCO
Cystathionine beta-lyase, putative OS=Ricinus
communis,63.16,0.001,seg,NULL,CUFF.3050.2
         (99 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g064320.2 | cystathionine beta-lyase | HC | chr1:28308855-...    59   1e-09
Medtr1g064320.1 | cystathionine beta-lyase | HC | chr1:28308855-...    59   1e-09

>Medtr1g064320.2 | cystathionine beta-lyase | HC |
          chr1:28308855-28299536 | 20130731
          Length = 467

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 35/44 (79%), Gaps = 1/44 (2%)

Query: 33 NSANFRTSELLCAK-GFKLYCSLDREMDVSTSPMVDYAVAECLS 75
           SANFR ++LLCA  GFKL CS+DREMDV TS ++D  VA+CL+
Sbjct: 39 KSANFRKNKLLCANDGFKLRCSVDREMDVRTSALMDDEVADCLN 82


>Medtr1g064320.1 | cystathionine beta-lyase | HC |
          chr1:28308855-28299536 | 20130731
          Length = 468

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 35/44 (79%), Gaps = 1/44 (2%)

Query: 33 NSANFRTSELLCAK-GFKLYCSLDREMDVSTSPMVDYAVAECLS 75
           SANFR ++LLCA  GFKL CS+DREMDV TS ++D  VA+CL+
Sbjct: 39 KSANFRKNKLLCANDGFKLRCSVDREMDVRTSALMDDEVADCLN 82