Miyakogusa Predicted Gene

Lj0g3v0064829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0064829.1 tr|B9IGA5|B9IGA5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_825349 PE=4
SV=1,27.79,3e-17,VARLMGL,NULL; seg,NULL,CUFF.2994.1
         (432 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g464300.1 | hypothetical protein | HC | chr3:25825954-2582...   289   4e-78
Medtr5g071090.1 | hypothetical protein | HC | chr5:30136223-3013...   109   6e-24
Medtr4g015650.1 | ALC-interacting protein | HC | chr4:4717136-47...    53   6e-07

>Medtr3g464300.1 | hypothetical protein | HC |
           chr3:25825954-25824350 | 20130731
          Length = 409

 Score =  289 bits (739), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 193/411 (46%), Positives = 241/411 (58%), Gaps = 54/411 (13%)

Query: 31  TTNAGCLISIFRKILCSRGVPTQSSDQTRELRASNSMGSGKAQDLNAEAGAASTTTPGIV 90
           +T  GCL +I RKILCS  +P  SS+QT E  ++NS+ S    +L     +A T  P +V
Sbjct: 30  STTTGCLTAIMRKILCSGNLPKDSSNQTTEFDSANSVLSVNDHNLGV---SAVTPPPPLV 86

Query: 91  ARLMGLESIASSEMPCXXXXXXXXXXXXMNSMDQDYLGDCNG-MQGLQ-KKVKSTLSFRE 148
           ARLMGLES+   E+P             MNS+D  YLG+ NG ++ L  K+V STLSFRE
Sbjct: 87  ARLMGLESMV--EVPFASKPGSLSRSKSMNSLD--YLGESNGKIESLHHKRVGSTLSFRE 142

Query: 149 VPTFLLIENEKFLVFSFENGGES-RAFKSTGRKNEIGYPELKQKVPTKRGELKENKREKV 207
            PTF + ENE F V SF N GES +  KS GRK ++   ELK+K         +NKRE V
Sbjct: 143 PPTFQMSENESFFVLSFGNEGESGKGLKSNGRKKKMSCSELKEK---------KNKREIV 193

Query: 208 CDKKKGQMSRRVCDVSCGNVRNDGKLQDITNTLHVSK-DSSENKCFDSEALKLSQSQHLI 266
           CD+K   MS+RV +          KLQ+ITNT H  K  SSE KCFDSEA +L ++   +
Sbjct: 194 CDEK---MSKRVSN----------KLQEITNTSHRFKASSSEKKCFDSEAGELLKA---M 237

Query: 267 NCKEVVIG---GXXXXXXXXTNCQTENKIEVECKSQDSSPVSVLDFEREACGK------V 317
           NCKEVV+G             NC TE KIE ECKS D SPVSVL+FER++C        V
Sbjct: 238 NCKEVVVGERLKKRRTRKKRRNCYTEQKIETECKSDDLSPVSVLEFERKSCVAGIDSVAV 297

Query: 318 GLNSRRKLSAELENDQNFHLRSDDNLVIDERKVKATENTKFGGP--------KEYTGIRG 369
           GLN RRKL+ ELE  ++  +RSDDNL+IDE+  KA +N  + G         KEY  I  
Sbjct: 298 GLNPRRKLTPELETGKHIRMRSDDNLMIDEKNDKAIQNNIYEGSKKKEKQSYKEYIDIWD 357

Query: 370 EICRLVEDDLARS-NQIHGWMNEQCXXXXXXXXXXXXIFDQLLNELMVELV 419
           E CRLV D+LA S NQ+H WMNEQ             IFDQLLNE++ +LV
Sbjct: 358 EACRLVGDELAGSKNQVHVWMNEQSDLGSICTDFESEIFDQLLNEVVTQLV 408


>Medtr5g071090.1 | hypothetical protein | HC |
           chr5:30136223-30134605 | 20130731
          Length = 312

 Score =  109 bits (272), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 128/291 (43%), Gaps = 73/291 (25%)

Query: 145 SFREVP-TFLLIENEKFLVFSFENGGESRAFKSTGRKNEIGYPELKQKVPTKRGELKENK 203
           S   VP  F L+ENE FLVFSFE+GGE+R FKS GR+        K+K    RGE+K NK
Sbjct: 77  SLNYVPQAFHLLENENFLVFSFESGGENRKFKSKGRR--------KEKKREVRGEVKRNK 128

Query: 204 REKVCDKKKGQMSRRVCDVSCGNVRNDGKLQDITNTLHVSKDSSENKCFDSEALKLSQSQ 263
           REKV D                    DG+                   F+    K     
Sbjct: 129 REKVND--------------------DGEFH-----------------FEKSLFKA---- 147

Query: 264 HLINCKEVVIGGXXXXXXXXTNCQTENKIEVECKSQDSSPVSVLDFEREACG------KV 317
                  V  G           C  E K+E EC S+D SPVSV DFE +  G       V
Sbjct: 148 -------VGNGEKVKKRKKGKTCCVEEKVESECSSEDYSPVSVFDFEHDVSGTEEDLCDV 200

Query: 318 GLNSRRKLSAELENDQNFHLRSDDNLVIDER-KVKATENTKFGGPK-------EYTGIRG 369
            ++ RRKLS  LENDQ F L SD N + +E  KVK  EN    G +       E   I  
Sbjct: 201 DMSWRRKLSPVLENDQLFILHSDSNFMNEEESKVKEIENNLNEGSRKKERHNNECVDIWI 260

Query: 370 EICRLVEDDLARSNQIHGWMNEQCXXXXXXXXXXXXIFDQLLNELMVELVG 420
           +IC+LV+D+L   +++H    +Q             I D+LL+E++ + V 
Sbjct: 261 KICKLVDDELV--SELHEVKRKQNDLENISADFELEILDELLDEVIDQFVS 309


>Medtr4g015650.1 | ALC-interacting protein | HC |
           chr4:4717136-4719337 | 20130731
          Length = 385

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 12/130 (9%)

Query: 35  GCLISIFRKILCSRGVPTQSSDQTRELRASNSMGSGKAQDLNAEAGAASTTTPGIVARLM 94
           GC  S  + +LC+R    ++S          ++   K +  +     + TTTPG+VARLM
Sbjct: 10  GCFSSFIKVLLCARN---ETSPPVYPSENVETIHHKKDKLFDD----SITTTPGVVARLM 62

Query: 95  GLESIASSEMPCX-XXXXXXXXXXXMNSMDQDYLGDCNGMQGLQKKVKSTLSFREVPTFL 153
           GL+S+ S++                +N +  DYL + +   G  ++VK++ SFREVP+  
Sbjct: 63  GLDSLPSTKRVVQGTTLDSVPRSKSVNFV--DYLLEFDKNMGSHRRVKTSASFREVPS-- 118

Query: 154 LIENEKFLVF 163
           ++E +K  +F
Sbjct: 119 MVEKKKSFLF 128