Miyakogusa Predicted Gene

Lj0g3v0064569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0064569.1 Non Characterized Hit- tr|H3HU78|H3HU78_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,38.81,0.000001,FAD/NAD(P)-binding domain,NULL; no
description,NULL; seg,NULL; PHYTOENE DEHYDROGENASE,NULL,CUFF.2973.1
         (276 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g077580.1 | pyridine nucleotide-disulfide oxidoreductase d...   462   e-130
Medtr1g034450.1 | pyridine nucleotide-disulfide oxidoreductase d...   380   e-106
Medtr1g034450.2 | pyridine nucleotide-disulfide oxidoreductase d...   379   e-105
Medtr1g054965.1 | carotenoid isomerase | HC | chr1:24154122-2414...    53   4e-07
Medtr1g054965.2 | carotenoid isomerase | HC | chr1:24154122-2414...    52   5e-07
Medtr1g054965.4 | carotenoid isomerase | HC | chr1:24154122-2414...    51   1e-06
Medtr1g054965.3 | carotenoid isomerase | HC | chr1:24154122-2414...    50   2e-06

>Medtr8g077580.1 | pyridine nucleotide-disulfide oxidoreductase
           domain protein | HC | chr8:32995445-33002738 | 20130731
          Length = 564

 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/276 (80%), Positives = 242/276 (87%)

Query: 1   MQADVLKATLASDAVIGSTASVHAPGSGYVLLHHVMGESDGDRGVWSFVEXXXXXXXXXX 60
            +ADVLKATLA+DAVIGSTASVH PGSGYVLLHHVMGESDG+RG+WS+VE          
Sbjct: 219 FEADVLKATLATDAVIGSTASVHTPGSGYVLLHHVMGESDGERGIWSYVEGGMGSISKAI 278

Query: 61  XXXXXXXXXHVVTNAEVSQLLIENSSTVRGVILADGTEVHSSVVLSNATPYKTFMELVPS 120
                    HV TNAEVSQLLI+NSSTV GVILADGTEVH+SVVLSNATPYKTFM+LVP+
Sbjct: 279 ASAAVAAGAHVATNAEVSQLLIKNSSTVSGVILADGTEVHASVVLSNATPYKTFMDLVPN 338

Query: 121 NVLPDDFVRAIKHSDYSSATTKINIAVDKLPQFQCCKLNHPHDGPQHVGSIRIGFESMEE 180
           NVLPDDF RAIKHSDYSSATTKIN+AVDKLPQFQCCK NH   GP+HVG+I IG ESMEE
Sbjct: 339 NVLPDDFSRAIKHSDYSSATTKINVAVDKLPQFQCCKSNHSQAGPEHVGTIHIGSESMEE 398

Query: 181 IHSACQDAMNGVPSRRPFIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHDY 240
           IHSA QD++NG+PSRRP IEMTIPSVLDKTISPPG HVINLFVQYTPYKP DGDWQDH+Y
Sbjct: 399 IHSASQDSVNGIPSRRPVIEMTIPSVLDKTISPPGMHVINLFVQYTPYKPSDGDWQDHEY 458

Query: 241 RESFAQKCFTLVDEYAPGFSSSILGYDMLTPPDLER 276
           RESFAQKCFTL+DEYAPGFS+S++GYDMLTPPDLER
Sbjct: 459 RESFAQKCFTLIDEYAPGFSTSVVGYDMLTPPDLER 494


>Medtr1g034450.1 | pyridine nucleotide-disulfide oxidoreductase
           domain protein | HC | chr1:12555446-12544453 | 20130731
          Length = 566

 Score =  380 bits (977), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 176/276 (63%), Positives = 214/276 (77%)

Query: 1   MQADVLKATLASDAVIGSTASVHAPGSGYVLLHHVMGESDGDRGVWSFVEXXXXXXXXXX 60
            ++++LK TLA DA+IGS  +++ PGSGYVLLHH+MGE+DGDR +WS VE          
Sbjct: 220 FESNLLKGTLAGDAIIGSMMNINTPGSGYVLLHHIMGETDGDRNIWSHVEGGMGAVSLAI 279

Query: 61  XXXXXXXXXHVVTNAEVSQLLIENSSTVRGVILADGTEVHSSVVLSNATPYKTFMELVPS 120
                    H+ T+ EV ++++  S    GV+LADGTEVHSSVVLSNATPYKTFMELVP 
Sbjct: 280 CRAAKEAGVHIETDKEVLKVMVAESGRANGVLLADGTEVHSSVVLSNATPYKTFMELVPR 339

Query: 121 NVLPDDFVRAIKHSDYSSATTKINIAVDKLPQFQCCKLNHPHDGPQHVGSIRIGFESMEE 180
           + LP +F+ AIKHSDYSS TTKIN+AVDKLPQF C K+N+   GPQH  +I IGFESMEE
Sbjct: 340 DFLPVEFLCAIKHSDYSSGTTKINVAVDKLPQFPCFKINNTEVGPQHTATIHIGFESMEE 399

Query: 181 IHSACQDAMNGVPSRRPFIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHDY 240
           I SACQDA NG+PS+RP +EMTIPS LD TISPPGKHVI+LF QYTPYKP +G W +  Y
Sbjct: 400 IISACQDACNGIPSQRPVMEMTIPSSLDDTISPPGKHVISLFTQYTPYKPSNGSWDNAAY 459

Query: 241 RESFAQKCFTLVDEYAPGFSSSILGYDMLTPPDLER 276
           RES+AQ+CF L++E+APGF SS++GYDMLTPPDLER
Sbjct: 460 RESYAQRCFNLIEEHAPGFCSSVIGYDMLTPPDLER 495


>Medtr1g034450.2 | pyridine nucleotide-disulfide oxidoreductase
           domain protein | HC | chr1:12555446-12544453 | 20130731
          Length = 414

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 176/275 (64%), Positives = 214/275 (77%)

Query: 2   QADVLKATLASDAVIGSTASVHAPGSGYVLLHHVMGESDGDRGVWSFVEXXXXXXXXXXX 61
           ++++LK TLA DA+IGS  +++ PGSGYVLLHH+MGE+DGDR +WS VE           
Sbjct: 69  ESNLLKGTLAGDAIIGSMMNINTPGSGYVLLHHIMGETDGDRNIWSHVEGGMGAVSLAIC 128

Query: 62  XXXXXXXXHVVTNAEVSQLLIENSSTVRGVILADGTEVHSSVVLSNATPYKTFMELVPSN 121
                   H+ T+ EV ++++  S    GV+LADGTEVHSSVVLSNATPYKTFMELVP +
Sbjct: 129 RAAKEAGVHIETDKEVLKVMVAESGRANGVLLADGTEVHSSVVLSNATPYKTFMELVPRD 188

Query: 122 VLPDDFVRAIKHSDYSSATTKINIAVDKLPQFQCCKLNHPHDGPQHVGSIRIGFESMEEI 181
            LP +F+ AIKHSDYSS TTKIN+AVDKLPQF C K+N+   GPQH  +I IGFESMEEI
Sbjct: 189 FLPVEFLCAIKHSDYSSGTTKINVAVDKLPQFPCFKINNTEVGPQHTATIHIGFESMEEI 248

Query: 182 HSACQDAMNGVPSRRPFIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHDYR 241
            SACQDA NG+PS+RP +EMTIPS LD TISPPGKHVI+LF QYTPYKP +G W +  YR
Sbjct: 249 ISACQDACNGIPSQRPVMEMTIPSSLDDTISPPGKHVISLFTQYTPYKPSNGSWDNAAYR 308

Query: 242 ESFAQKCFTLVDEYAPGFSSSILGYDMLTPPDLER 276
           ES+AQ+CF L++E+APGF SS++GYDMLTPPDLER
Sbjct: 309 ESYAQRCFNLIEEHAPGFCSSVIGYDMLTPPDLER 343


>Medtr1g054965.1 | carotenoid isomerase | HC |
           chr1:24154122-24148207 | 20130731
          Length = 596

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 41/217 (18%)

Query: 70  HVVTNAEVSQLLIENSSTVRGVILADGTEVHSSVVLSNATPYKTFMELVPSNVLP--DDF 127
            ++  A V+ ++ E    V GV L+DG E  +  ++SNAT + TF +LV    LP  ++ 
Sbjct: 323 QILYKANVTSIITEQGKAV-GVRLSDGREFFAKTIISNATRWDTFGKLVKGESLPKEEEN 381

Query: 128 VRAIKHSDYSSATTKINIAVDKLPQFQCCKLNHPHDGPQHVGSIRIGFESMEEIHSACQD 187
            + +     S  +  + +  + LP    C          H   +   + S+EE + +   
Sbjct: 382 FQKVYVKAPSFLSIHMGVKAEVLPPDTDC----------HHFVLENNWTSLEEPYGS--- 428

Query: 188 AMNGVPSRRPFIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHDYRESFAQK 247
                      I ++IP++LD +++P G+H++++F   +    +D DWQ    R  +  K
Sbjct: 429 -----------IFLSIPTILDSSLAPEGRHILHIFTTSS----MD-DWQGLS-RIDYEAK 471

Query: 248 CFTLVDEYA--------PGFSSSILGYDMLTPPDLER 276
              + DE          PG  SSI   ++ TP    R
Sbjct: 472 KQVVADEIISRLEKKLFPGLRSSIDFIEVGTPKTHRR 508


>Medtr1g054965.2 | carotenoid isomerase | HC |
           chr1:24154122-24148207 | 20130731
          Length = 440

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 41/217 (18%)

Query: 70  HVVTNAEVSQLLIENSSTVRGVILADGTEVHSSVVLSNATPYKTFMELVPSNVLP--DDF 127
            ++  A V+ ++ E    V GV L+DG E  +  ++SNAT + TF +LV    LP  ++ 
Sbjct: 167 QILYKANVTSIITEQGKAV-GVRLSDGREFFAKTIISNATRWDTFGKLVKGESLPKEEEN 225

Query: 128 VRAIKHSDYSSATTKINIAVDKLPQFQCCKLNHPHDGPQHVGSIRIGFESMEEIHSACQD 187
            + +     S  +  + +  + LP    C          H   +   + S+EE + +   
Sbjct: 226 FQKVYVKAPSFLSIHMGVKAEVLPPDTDC----------HHFVLENNWTSLEEPYGS--- 272

Query: 188 AMNGVPSRRPFIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHDYRESFAQK 247
                      I ++IP++LD +++P G+H++++F   +    +D DWQ    R  +  K
Sbjct: 273 -----------IFLSIPTILDSSLAPEGRHILHIFTTSS----MD-DWQGLS-RIDYEAK 315

Query: 248 CFTLVDEYA--------PGFSSSILGYDMLTPPDLER 276
              + DE          PG  SSI   ++ TP    R
Sbjct: 316 KQVVADEIISRLEKKLFPGLRSSIDFIEVGTPKTHRR 352


>Medtr1g054965.4 | carotenoid isomerase | HC |
           chr1:24154122-24148207 | 20130731
          Length = 519

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 41/204 (20%)

Query: 70  HVVTNAEVSQLLIENSSTVRGVILADGTEVHSSVVLSNATPYKTFMELVPSNVLP--DDF 127
            ++  A V+ ++ E    V GV L+DG E  +  ++SNAT + TF +LV    LP  ++ 
Sbjct: 323 QILYKANVTSIITEQGKAV-GVRLSDGREFFAKTIISNATRWDTFGKLVKGESLPKEEEN 381

Query: 128 VRAIKHSDYSSATTKINIAVDKLPQFQCCKLNHPHDGPQHVGSIRIGFESMEEIHSACQD 187
            + +     S  +  + +  + LP    C          H   +   + S+EE + +   
Sbjct: 382 FQKVYVKAPSFLSIHMGVKAEVLPPDTDC----------HHFVLENNWTSLEEPYGS--- 428

Query: 188 AMNGVPSRRPFIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHDYRESFAQK 247
                      I ++IP++LD +++P G+H++++F   +    +D DWQ    R  +  K
Sbjct: 429 -----------IFLSIPTILDSSLAPEGRHILHIFTTSS----MD-DWQGLS-RIDYEAK 471

Query: 248 CFTLVDEYA--------PGFSSSI 263
              + DE          PG  SSI
Sbjct: 472 KQVVADEIISRLEKKLFPGLRSSI 495


>Medtr1g054965.3 | carotenoid isomerase | HC |
           chr1:24154122-24148207 | 20130731
          Length = 321

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 45/206 (21%)

Query: 70  HVVTNAEVSQLLIENSSTVRGVILADGTEVHSSVVLSNATPYKTFMELVPSNVLP---DD 126
            ++  A V+ ++ E    V GV L+DG E  +  ++SNAT + TF +LV    LP   ++
Sbjct: 125 QILYKANVTSIITEQGKAV-GVRLSDGREFFAKTIISNATRWDTFGKLVKGESLPKEEEN 183

Query: 127 FVRA-IKHSDYSSATTKINIAVDKLPQFQCCKLNHPHDGPQHVGSIRIGFESMEEIHSAC 185
           F +  +K   + S    +   V             P D   H   +   + S+EE + + 
Sbjct: 184 FQKVYVKAPSFLSIHMGVKAEV------------LPPDTDCHHFVLENNWTSLEEPYGS- 230

Query: 186 QDAMNGVPSRRPFIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHDYRESFA 245
                        I ++IP++LD +++P G+H++++F   +    +D DWQ    R  + 
Sbjct: 231 -------------IFLSIPTILDSSLAPEGRHILHIFTTSS----MD-DWQGLS-RIDYE 271

Query: 246 QKCFTLVDEYA--------PGFSSSI 263
            K   + DE          PG  SSI
Sbjct: 272 AKKQVVADEIISRLEKKLFPGLRSSI 297