Miyakogusa Predicted Gene

Lj0g3v0064559.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0064559.1 Non Characterized Hit- tr|I1HHS0|I1HHS0_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,59.26,3e-19,SERINE/THREONINE-PROTEIN KINASE 38-RELATED,NULL;
SERINE/THREONINE-PROTEIN KINASE 38,NULL,CUFF.2974.1
         (85 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g075880.1 | AGC kinase | HC | chr1:33640155-33632968 | 201...   108   1e-24
Medtr1g442790.2 | AGC kinase | HC | chr1:15925811-15919627 | 201...   107   2e-24
Medtr1g442790.1 | AGC kinase | HC | chr1:15925811-15919630 | 201...   107   2e-24
Medtr1g069735.1 | AGC kinase | HC | chr1:30404469-30387598 | 201...    80   3e-16
Medtr7g097150.1 | AGC kinase | HC | chr7:39053499-39059136 | 201...    80   6e-16
Medtr1g042700.1 | AGC kinase | HC | chr1:15872146-15867493 | 201...    77   5e-15
Medtr1g442790.3 | AGC kinase | HC | chr1:15925811-15920075 | 201...    58   2e-09
Medtr1g442740.1 | hypothetical protein | HC | chr1:15889224-1588...    54   3e-08

>Medtr1g075880.1 | AGC kinase | HC | chr1:33640155-33632968 |
           20130731
          Length = 536

 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 58/64 (90%)

Query: 5   QMLPSKDINFVGYTYKNFEIVNENEIPGIAELKKKSTKSKRPSIKALFDDESAMAANQPV 64
           +ML SKD+NFVGYTYKN+EIVN++ +PG+AELKKKSTK KRPSIK LFDD+SA  ANQPV
Sbjct: 465 KMLSSKDVNFVGYTYKNYEIVNDDHLPGMAELKKKSTKPKRPSIKTLFDDDSATTANQPV 524

Query: 65  KGSF 68
           +GS+
Sbjct: 525 QGSY 528


>Medtr1g442790.2 | AGC kinase | HC | chr1:15925811-15919627 |
           20130731
          Length = 540

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 71/84 (84%), Gaps = 3/84 (3%)

Query: 4   NQMLPSKDINFVGYTYKNFEIVNENEIPGIAELKKKSTKSKRPSIKALFDDESAMAA--N 61
            +MLPSKDINFVGYTYKN+E+V+ + IPG AELKKKS   +  SIK+LF+DESA A+  +
Sbjct: 458 RKMLPSKDINFVGYTYKNYEVVDASVIPGFAELKKKSKPKRP-SIKSLFEDESAKASSHH 516

Query: 62  QPVKGSFLNLLPPQMEVPEKNESQ 85
           QPV+GSFL+LLPPQME PEKNESQ
Sbjct: 517 QPVRGSFLSLLPPQMETPEKNESQ 540


>Medtr1g442790.1 | AGC kinase | HC | chr1:15925811-15919630 |
           20130731
          Length = 540

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 71/84 (84%), Gaps = 3/84 (3%)

Query: 4   NQMLPSKDINFVGYTYKNFEIVNENEIPGIAELKKKSTKSKRPSIKALFDDESAMAA--N 61
            +MLPSKDINFVGYTYKN+E+V+ + IPG AELKKKS   +  SIK+LF+DESA A+  +
Sbjct: 458 RKMLPSKDINFVGYTYKNYEVVDASVIPGFAELKKKSKPKRP-SIKSLFEDESAKASSHH 516

Query: 62  QPVKGSFLNLLPPQMEVPEKNESQ 85
           QPV+GSFL+LLPPQME PEKNESQ
Sbjct: 517 QPVRGSFLSLLPPQMETPEKNESQ 540


>Medtr1g069735.1 | AGC kinase | HC | chr1:30404469-30387598 |
           20130731
          Length = 560

 Score = 80.5 bits (197), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 64/84 (76%), Gaps = 11/84 (13%)

Query: 5   QMLPSKDINFVGYTYKNFEIVNENEIPGIAELKKKSTKSKRPSIKALFD----------D 54
           +ML SKD+NFVGYTYKNFEIVN+ ++PG+AELKKK +KSKRPSIK+LFD           
Sbjct: 467 KMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKPSKSKRPSIKSLFDSESETSELSEV 526

Query: 55  ESAMAANQPVKGSFLNLLPPQMEV 78
               A+++P +GSFLNLLPP++E 
Sbjct: 527 SDTSASDRP-QGSFLNLLPPKLEA 549


>Medtr7g097150.1 | AGC kinase | HC | chr7:39053499-39059136 |
           20130731
          Length = 538

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 9/68 (13%)

Query: 5   QMLPSKDINFVGYTYKNFEIVNENEIPGIAELKKKSTKSKRPSIKALFD---------DE 55
           +ML SKDINFVGYTYKNFEIVN+ ++PG+AELKK S   ++PS+K+LFD         D 
Sbjct: 468 KMLSSKDINFVGYTYKNFEIVNDYQVPGMAELKKTSKSKRKPSVKSLFDGALETSEVSDT 527

Query: 56  SAMAANQP 63
           S ++A+ P
Sbjct: 528 SEVSASNP 535


>Medtr1g042700.1 | AGC kinase | HC | chr1:15872146-15867493 |
           20130731
          Length = 527

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 50/62 (80%), Gaps = 2/62 (3%)

Query: 5   QMLPSKDINFVGYTYKNFEIVNENEIPGIAELKKKSTKSKRPSIKALFDDESAMA-ANQP 63
           +ML SKDINFVGYTYKN+E+V+ N IPG  ELK+K  K +RPSI +LF+DESA A ++QP
Sbjct: 463 KMLQSKDINFVGYTYKNYEMVDANAIPGFVELKQKP-KPQRPSINSLFEDESAEASSHQP 521

Query: 64  VK 65
            +
Sbjct: 522 AR 523


>Medtr1g442790.3 | AGC kinase | HC | chr1:15925811-15920075 |
           20130731
          Length = 513

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/49 (69%), Positives = 41/49 (83%), Gaps = 1/49 (2%)

Query: 4   NQMLPSKDINFVGYTYKNFEIVNENEIPGIAELKKKSTKSKRPSIKALF 52
            +MLPSKDINFVGYTYKN+E+V+ + IPG AELKKKS   + PSIK+LF
Sbjct: 458 RKMLPSKDINFVGYTYKNYEVVDASVIPGFAELKKKSKPKR-PSIKSLF 505


>Medtr1g442740.1 | hypothetical protein | HC |
          chr1:15889224-15888089 | 20130731
          Length = 68

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/38 (68%), Positives = 33/38 (86%), Gaps = 2/38 (5%)

Query: 50 ALFDDESAMAA--NQPVKGSFLNLLPPQMEVPEKNESQ 85
          +L +DESA A+  +QPV+GSFL+LLPPQME P+KNESQ
Sbjct: 31 SLEEDESAKASSHHQPVRGSFLSLLPPQMETPKKNESQ 68