Miyakogusa Predicted Gene

Lj0g3v0064309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0064309.1 Non Characterized Hit- tr|K4C4X5|K4C4X5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,26.98,0.000000004,seg,NULL; coiled-coil,NULL,gene.g4636.t1.1
         (627 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g053660.1 | C2H2-like zinc finger protein, putative | LC |...   544   e-154
Medtr1g100810.1 | C2H2-like zinc finger protein, putative | HC |...   513   e-145

>Medtr6g053660.1 | C2H2-like zinc finger protein, putative | LC |
           chr6:19344263-19334391 | 20130731
          Length = 709

 Score =  544 bits (1401), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 325/610 (53%), Positives = 388/610 (63%), Gaps = 44/610 (7%)

Query: 57  QDSTKVRDLLGAYWDKLSVEEAKEVVSFENVMLKEVPGSSILESLMTLVQKQGFSLLPQY 116
           +D++K RD LGAYWDKLSVEEAKEVVSFENVML+ VPGSSIL++L TL QKQGF LLP  
Sbjct: 104 KDTSKTRDFLGAYWDKLSVEEAKEVVSFENVMLEGVPGSSILDTLTTLTQKQGFFLLPPC 163

Query: 117 YLRAGAALLDIVQSKPSSFPISSLELFSILDDASEKTCLWGTAVSMQKHLLDGGAGKIGL 176
           YLRAGAALLDI++SKPSSFPI S ELF+ILDDASE T L GTA SMQK++  GG  KIGL
Sbjct: 164 YLRAGAALLDILESKPSSFPIPSHELFNILDDASEGTFLLGTAASMQKYIFLGGDEKIGL 223

Query: 177 EPENVVAWTSFLLEQKLVEAWLSDRDAEALRCQKQLVEEEEAAQKRYQAEILXXXXXXXX 236
           EP+NVVA TSFLLEQ LV+AWL+D+DAEALRCQKQLV+EEEAA+KR QAE+L        
Sbjct: 224 EPKNVVACTSFLLEQILVKAWLADKDAEALRCQKQLVDEEEAAKKR-QAEVLKRKREKKI 282

Query: 237 XXXXXXXXXXXHKDVEEIKKNIDSAVKDLSRAEASLDRYNSEGHDLDTFADNNTPLHVPF 296
                      HK   E K N+D+ VK LS AE SLD Y+ E  + + FA NN P HVPF
Sbjct: 283 RQKEQKAREQSHKLKVETKGNVDTTVKTLSSAEKSLDTYDVEAQNPE-FA-NNAPSHVPF 340

Query: 297 QCSDTNEGIDEITQSRHDFGSDQNIERQSARGHNHRRSAVARWQEPPK-LQWAVANGLHK 355
           Q  D NE     TQS + FGSDQ I  Q  R  +    A+ARWQE PK  Q  V + LH 
Sbjct: 341 QRPDVNEEKYGDTQSGNAFGSDQII-GQPERELDRPCRAIARWQELPKPPQHTVVSDLHT 399

Query: 356 NLHTPISKNEVNTQKGIGRDQKAAATVN-GSKAWSQKPKSEIDRVVLKTKAEKEPDLVKN 414
             + PISK EV  Q G    Q+    VN   KAW  KPK E DR+VLKT A+ + DLVKN
Sbjct: 400 KKNPPISKPEVVQQYGTRDYQREDTIVNTAGKAWLDKPKPETDRMVLKTGAKIKADLVKN 459

Query: 415 H------------------------------VVLIGSISVNLGNCRKSEGNVVESQEDCM 444
           H                               VLIGSI VNLG C KS GN V SQE C+
Sbjct: 460 HDVLIGSIPVNLVKNPEVLIGSIPVNLVKNPEVLIGSIPVNLGKCSKSVGNGVASQEKCL 519

Query: 445 VKNVAEQNSSQDKPMEPDLVVTGNNQLKVRHWRPVIQLETKDTLPVQNGGTGVDVVHGNG 504
           ++NV + ++SQDKP +PD V TGN+Q  V+   PV Q ETKD  PVQ+    VD V+   
Sbjct: 520 IENVEKLSNSQDKPKKPDFVKTGNDQSTVKLSTPVSQFETKDLFPVQSPEAEVDAVNRGE 579

Query: 505 DCRNLSGPTS------FENNNSHPEGRVNRGSLQSSIHEAKAFLAQRWKEALLSNHVKLV 558
             +NLS  +S      FEN  S+PEGRV+ G +Q S   AKAFLAQRW+EA+ S+HVKLV
Sbjct: 580 GFQNLSKLSSYGSDIGFENKISNPEGRVDPGKVQFSSQAAKAFLAQRWEEAMSSSHVKLV 639

Query: 559 VSPDSKSPRCQEIQHSNIAACNSSD-ERC-NIIANADNRLPATXXXXXXXXXXXXENGNK 616
           VS D++SP   +IQ   +AAC SSD +RC NI+AN +N+  +T            + G  
Sbjct: 640 VSLDAESPGSHKIQDLKVAACESSDVDRCSNILANEENKSLSTTKASKSKRSGKSKTGTN 699

Query: 617 TKYIPKQRSA 626
            KYIPK+ + 
Sbjct: 700 YKYIPKENTT 709


>Medtr1g100810.1 | C2H2-like zinc finger protein, putative | HC |
           chr1:45258128-45251792 | 20130731
          Length = 687

 Score =  513 bits (1320), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 299/604 (49%), Positives = 380/604 (62%), Gaps = 61/604 (10%)

Query: 57  QDSTKVRDLLGAYWDKLSVEEAKEVVSFENVMLKEVPGSSILESLMTLVQKQGFSLLPQY 116
           +DS   RDLLGAYWDKLSVEEAKEVVSFENVML+EVPGSSI+++L TL  +QGF   PQY
Sbjct: 110 KDSKISRDLLGAYWDKLSVEEAKEVVSFENVMLEEVPGSSIVQALSTLRTQQGFYSFPQY 169

Query: 117 YLRAGAALLDIVQSKPSSFPISSLELFSILDDASEKTCLWGTAVSMQKHLLDGGAGKIGL 176
           YLRAG +LLDIVQS+PSSFPISS +LF+ILDD+SE T L GTAVSMQ+H+ DG A KIGL
Sbjct: 170 YLRAGFSLLDIVQSRPSSFPISSQKLFNILDDSSENTFLCGTAVSMQRHVFDGEAEKIGL 229

Query: 177 EPENVVAWTSFLLEQKLVEAWLSDRDAEALRCQKQLVEEEEAAQKRYQAEILXXXXXXXX 236
           EP+N+VA TSFLLEQKLV+AWL+D+DAEALRCQK LVEEEEAAQ+R QAE+L        
Sbjct: 230 EPKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQRR-QAEVLERKRMKKL 288

Query: 237 XXXXXXXXXXXHKDVEEIKKNIDSAVKDLSRAEASLDRYNSEGHDLDTFADNNTPLHVPF 296
                        DV E+K +I SA +++S  E SL   + E H    FAD  +  HV +
Sbjct: 289 RLKEQKARDQLENDV-EVKGSIRSAGEEVSPEEPSLAACDFEAHRAHAFADQASSPHVTY 347

Query: 297 QCSDTNEGIDEIT---------------------QSRHDFGSDQNIERQSARGHNHRRSA 335
            C DTNEG+DE T                     QS ++  +D+N+ERQ++  HN RR  
Sbjct: 348 HCPDTNEGVDEDTQLAYDCDTNQNVEPQTFKSDAQSGYECDTDRNLERQTSHRHNPRRIM 407

Query: 336 VARWQEPPKLQWAVANGLHKNLHTPISKNEVNTQKGIG--RDQKAAATVNGSKAWSQKPK 393
            ARW   PK Q  + NGLH + ++  SK+ V  + G G  RDQ+ A  VN  K WS+KPK
Sbjct: 408 TARWLRHPKSQSTIVNGLHASQNSQKSKSGVIPKYGNGTNRDQRVAPIVNSGKVWSRKPK 467

Query: 394 SEIDRVVLKTKAEKEPDLVKNHVVLIGSISVNLGNCRKSEGNVVESQEDCMVKNVAEQNS 453
            EID V+LK K  KEPD VK H VLIGS+SV L NC +SE N+V SQ +  ++N+A QN 
Sbjct: 468 PEIDTVILKPKLHKEPDEVKTHEVLIGSVSVTLVNCSQSENNLVTSQANSFIENLANQNI 527

Query: 454 SQDKPMEPDLVVTGNNQLKVRHWRPVIQLETKDTLPVQNGGTGVDVVHGNGDCRNLS--- 510
           +Q+KP++PD    GNNQ  V+ WRPV Q ETK+  P+Q+  T VDVVHGN D +NLS   
Sbjct: 528 AQEKPIKPDSFHGGNNQSGVKLWRPVSQHETKNPPPLQSAETEVDVVHGNAD-QNLSLQS 586

Query: 511 --------GPTSFENNNSHPEGRVNRGSLQSSIHEAKAFLAQRWKEALLSNHVKLVVSPD 562
                   G      N SH   + +    + S   AKAFL QRWKEA+ S+HV+LV+SPD
Sbjct: 587 NLRLCDIDGGNMGYGNKSHVGPKADSEGFRLSSDAAKAFLGQRWKEAISSHHVELVISPD 646

Query: 563 SKSPRCQEIQHSNIAACNSSDERCNIIANADNRLPATXXXXXXXXXXXXENGNKTKYIPK 622
           S++   + ++      C +S      +A +  R+               + G K KYIP+
Sbjct: 647 SETHGFKPVKD-----CATS------VAKSKPRM-------------RPDKGIKIKYIPR 682

Query: 623 QRSA 626
            ++A
Sbjct: 683 LKAA 686