Miyakogusa Predicted Gene

Lj0g3v0064139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0064139.1 Non Characterized Hit- tr|G7JI89|G7JI89_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.66,0.000000000001,coiled-coil,NULL; seg,NULL,CUFF.2945.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g043310.1 | hypothetical protein | HC | chr6:14988154-1498...    64   5e-11
Medtr5g061300.1 | hypothetical protein | LC | chr5:25477205-2547...    54   4e-08
Medtr6g088780.1 | hypothetical protein | HC | chr6:33900775-3390...    49   2e-06

>Medtr6g043310.1 | hypothetical protein | HC |
           chr6:14988154-14988701 | 20130731
          Length = 149

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 49/89 (55%)

Query: 1   ITKLHDLVENCGQSSSEAFKQVFGDERPGRVRCYGRTRTPSVFKRNNXXXXXXXXXXXXV 60
           I KL D ++NC Q   +AF+ +FG E+PGRV C+GRT TPS+ ++N             +
Sbjct: 21  IFKLQDSIQNCSQPPDQAFQTLFGKEKPGRVPCFGRTATPSMLRKNEEIANIKKHYEGEM 80

Query: 61  QRLTDKVHDMEAKHEDMERKFQILLRTML 89
             + +++   E+  +     ++ LL+ +L
Sbjct: 81  TSMKERMEAYESLTKKRMEAYESLLKCVL 109


>Medtr5g061300.1 | hypothetical protein | LC |
           chr5:25477205-25475100 | 20130731
          Length = 326

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 1   ITKLHDLVENCGQSSSEAFKQVFGDERPGRVRCYGRTRTPSVFKR 45
           +++L ++VE  G S +EAFK V G ERPGR+RCYGRT T +  KR
Sbjct: 228 LSQLQEMVEKKG-SDTEAFKAVMGKERPGRLRCYGRTVTKTSLKR 271


>Medtr6g088780.1 | hypothetical protein | HC |
          chr6:33900775-33901997 | 20130731
          Length = 138

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 45/89 (50%)

Query: 1  ITKLHDLVENCGQSSSEAFKQVFGDERPGRVRCYGRTRTPSVFKRNNXXXXXXXXXXXXV 60
          + +L   V N      +AF+ +FG E+PGRV C+GRT TPS+ ++N             +
Sbjct: 1  MQQLFKRVWNNTSFDDQAFQTLFGKEKPGRVLCFGRTATPSMLRKNEEIANIKKHYEGEM 60

Query: 61 QRLTDKVHDMEAKHEDMERKFQILLRTML 89
            + +++   E+  +     ++ LL+ +L
Sbjct: 61 TSMKERMEAYESFTKKRMEAYESLLKCVL 89