Miyakogusa Predicted Gene

Lj0g3v0063949.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0063949.1 Non Characterized Hit- tr|C6TAG4|C6TAG4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,85.1,0,18S_RNA_Rcl1p: 18S rRNA biogenesis protein RCL1,RNA
3'-terminal phosphate cyclase type 2; RNA 3' TER,CUFF.2925.1
         (258 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098715.1 | RNA 3-terminal phosphate cyclase-like protein,...   412   e-115
Medtr8g098715.2 | RNA 3-terminal phosphate cyclase-like protein,...   397   e-111
Medtr8g098715.3 | RNA 3-terminal phosphate cyclase-like protein,...   378   e-105

>Medtr8g098715.1 | RNA 3-terminal phosphate cyclase-like protein,
           putative | HC | chr8:41207973-41212681 | 20130731
          Length = 379

 Score =  412 bits (1058), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/254 (78%), Positives = 221/254 (87%)

Query: 1   MGKMAYKRLKGSQSFRQRLLLATLSSTPILIEDIRADETWPGLHSHEISLLRLFEMVCDD 60
           MGK  YK+LKGSQSFRQRLLL+TLSSTPI IEDIR ++T+ GL  HEISLLRLF+ V D 
Sbjct: 1   MGKTVYKKLKGSQSFRQRLLLSTLSSTPITIEDIRPNQTYSGLAKHEISLLRLFDTVSDG 60

Query: 61  CHVEINETGTKLKYKPGTIMGGKQYHAHECGLSRSIGYFLEPLIVLGLFAKEPLTIKLKG 120
           C VEI ETGTKLKYKPGTIMGG+  H  +C +SRSIGY+LEPLIVL LFAKEPL I+LKG
Sbjct: 61  CIVEIYETGTKLKYKPGTIMGGRVNHPFQCDVSRSIGYYLEPLIVLCLFAKEPLNIRLKG 120

Query: 121 ITNDSKDPSVDTFKSTAFPILKRFGVPSEGLDLKIESRGVPPNGGGEVTLSLPVVQSLMA 180
           ITNDSKDPSVDTFKS AF ILKRFGV  E + LKIESRG+PPNGGGEV LSLP+VQSL A
Sbjct: 121 ITNDSKDPSVDTFKSAAFHILKRFGVDFEAMSLKIESRGLPPNGGGEVVLSLPIVQSLTA 180

Query: 181 VNWIDEGFVKKIRGTTFSVRVSTQFENSMIKATRGIVNPLLSDVHLFSDHRSGPQAGNSP 240
           VNWIDEGFVKKIRG TFS +VS+QFE SMI+A RG+VNPL+SDVH+F+DHR+GP AGNSP
Sbjct: 181 VNWIDEGFVKKIRGVTFSTKVSSQFETSMIRAARGVVNPLVSDVHIFTDHRTGPPAGNSP 240

Query: 241 GYGISLVAETTSGA 254
           GYGISLVAETTSG 
Sbjct: 241 GYGISLVAETTSGC 254


>Medtr8g098715.2 | RNA 3-terminal phosphate cyclase-like protein,
           putative | HC | chr8:41207973-41212681 | 20130731
          Length = 407

 Score =  397 bits (1019), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/282 (70%), Positives = 221/282 (78%), Gaps = 28/282 (9%)

Query: 1   MGKMAYKRLKGSQSFRQRLLLATLSSTPILIEDIRADETWPGLHSHEISLLRLFEMVCDD 60
           MGK  YK+LKGSQSFRQRLLL+TLSSTPI IEDIR ++T+ GL  HEISLLRLF+ V D 
Sbjct: 1   MGKTVYKKLKGSQSFRQRLLLSTLSSTPITIEDIRPNQTYSGLAKHEISLLRLFDTVSDG 60

Query: 61  CHVEINETG----------------------------TKLKYKPGTIMGGKQYHAHECGL 92
           C VEI ETG                            TKLKYKPGTIMGG+  H  +C +
Sbjct: 61  CIVEIYETGYISLFSSFFVYYSFIQIIIIIFIILIAGTKLKYKPGTIMGGRVNHPFQCDV 120

Query: 93  SRSIGYFLEPLIVLGLFAKEPLTIKLKGITNDSKDPSVDTFKSTAFPILKRFGVPSEGLD 152
           SRSIGY+LEPLIVL LFAKEPL I+LKGITNDSKDPSVDTFKS AF ILKRFGV  E + 
Sbjct: 121 SRSIGYYLEPLIVLCLFAKEPLNIRLKGITNDSKDPSVDTFKSAAFHILKRFGVDFEAMS 180

Query: 153 LKIESRGVPPNGGGEVTLSLPVVQSLMAVNWIDEGFVKKIRGTTFSVRVSTQFENSMIKA 212
           LKIESRG+PPNGGGEV LSLP+VQSL AVNWIDEGFVKKIRG TFS +VS+QFE SMI+A
Sbjct: 181 LKIESRGLPPNGGGEVVLSLPIVQSLTAVNWIDEGFVKKIRGVTFSTKVSSQFETSMIRA 240

Query: 213 TRGIVNPLLSDVHLFSDHRSGPQAGNSPGYGISLVAETTSGA 254
            RG+VNPL+SDVH+F+DHR+GP AGNSPGYGISLVAETTSG 
Sbjct: 241 ARGVVNPLVSDVHIFTDHRTGPPAGNSPGYGISLVAETTSGC 282


>Medtr8g098715.3 | RNA 3-terminal phosphate cyclase-like protein,
           putative | HC | chr8:41207980-41212642 | 20130731
          Length = 271

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/242 (75%), Positives = 206/242 (85%)

Query: 1   MGKMAYKRLKGSQSFRQRLLLATLSSTPILIEDIRADETWPGLHSHEISLLRLFEMVCDD 60
           MGK  YK+LKGSQSFRQRLLL+TLSSTPI IEDIR ++T+ GL  HEISLLRLF+ V D 
Sbjct: 1   MGKTVYKKLKGSQSFRQRLLLSTLSSTPITIEDIRPNQTYSGLAKHEISLLRLFDTVSDG 60

Query: 61  CHVEINETGTKLKYKPGTIMGGKQYHAHECGLSRSIGYFLEPLIVLGLFAKEPLTIKLKG 120
           C VEI ETGTKLKYKPGTIMGG+  H  +C +SRSIGY+LEPLIVL LFAKEPL I+LKG
Sbjct: 61  CIVEIYETGTKLKYKPGTIMGGRVNHPFQCDVSRSIGYYLEPLIVLCLFAKEPLNIRLKG 120

Query: 121 ITNDSKDPSVDTFKSTAFPILKRFGVPSEGLDLKIESRGVPPNGGGEVTLSLPVVQSLMA 180
           ITNDSKDPSVDTFKS AF ILKRFGV  E + LKIESRG+PPNGGGEV LSLP+VQSL A
Sbjct: 121 ITNDSKDPSVDTFKSAAFHILKRFGVDFEAMSLKIESRGLPPNGGGEVVLSLPIVQSLTA 180

Query: 181 VNWIDEGFVKKIRGTTFSVRVSTQFENSMIKATRGIVNPLLSDVHLFSDHRSGPQAGNSP 240
           VNWIDEGFVKKIRG TFS +VS+QFE SMI+A RG+VNPL+SDVH+F+DHR+GP AG   
Sbjct: 181 VNWIDEGFVKKIRGVTFSTKVSSQFETSMIRAARGVVNPLVSDVHIFTDHRTGPPAGKYD 240

Query: 241 GY 242
            +
Sbjct: 241 SF 242