Miyakogusa Predicted Gene

Lj0g3v0063769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0063769.1 Non Characterized Hit- tr|F6HTH9|F6HTH9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.68,0.0000000000003,seg,NULL,CUFF.2912.1
         (113 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094130.1 | 3,4-dihydroxy-2-butanone 4-phosphate synthase ...    76   7e-15

>Medtr4g094130.1 | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
           HC | chr4:37272852-37266199 | 20130731
          Length = 535

 Score = 75.9 bits (185), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 11/113 (9%)

Query: 1   MFNGLNRIDSSVINVRGSDWAFPQLNSKFPLSQSAASRVKAAFGAGSIGT-------TLQ 53
           + NG N +  S+INVRGSD+AF +L+SKFP  ++AA       G G +         + Q
Sbjct: 23  LLNGFNSLSPSMINVRGSDFAFVRLSSKFPSCRNAA----LTSGGGDLKNEDLVGVESAQ 78

Query: 54  SDARAFATLGAETGLRSHXXXXXXXXXXXXIPSEGFSSIADAIEDIRNGKVVL 106
            +A A  TLGA+T L                P++GF+SI +AIEDIRNGK+V+
Sbjct: 79  PNAVALGTLGADTTLTGSGFSDDNDDFDSDSPTKGFASIPEAIEDIRNGKMVV 131