Miyakogusa Predicted Gene

Lj0g3v0063239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0063239.1 tr|Q8H1P5|Q8H1P5_SOYBN Urease accessory protein
UreD OS=Glycine max PE=2 SV=1,87.23,1e-16,
,NODE_92446_length_181_cov_12.353591.path2.1
         (47 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g050428.1 | urease accessory protein UreD | HC | chr1:1939...    83   5e-17

>Medtr1g050428.1 | urease accessory protein UreD | HC |
           chr1:19390714-19387259 | 20130731
          Length = 302

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/47 (80%), Positives = 43/47 (91%)

Query: 1   MSEKLQNPSAALSHQRDKADHFMTKPSFMASCSVFGPKKIGLLVRVA 47
           MSE+L NPSAALSHQ+ KAD F TKP+F+ASCSVFGPKKIGL+VRVA
Sbjct: 228 MSEQLHNPSAALSHQKKKADFFTTKPTFVASCSVFGPKKIGLVVRVA 274