Miyakogusa Predicted Gene

Lj0g3v0062889.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0062889.2 Non Characterized Hit- tr|E1ZSF6|E1ZSF6_CHLVA
Putative uncharacterized protein (Fragment)
OS=Chlorel,50.56,4e-18,2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE
2,NULL,CUFF.2840.2
         (179 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g072340.1 | haloacid dehalogenase-like hydrolase | HC | ch...   291   2e-79

>Medtr3g072340.1 | haloacid dehalogenase-like hydrolase | HC |
           chr3:32497122-32492665 | 20130731
          Length = 363

 Score =  291 bits (746), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 138/176 (78%), Positives = 154/176 (87%), Gaps = 3/176 (1%)

Query: 4   TARASSHAISPSHPYRLQPSPFPHQLPFSKLQRLGLVKNRLVARCSSGSDELGSVNGLQF 63
             RA+SH+I  SHP RLQ SP P+ + F   +RLGLVKNRL+ RC+SGSDE G +NG+Q 
Sbjct: 8   NCRATSHSIPLSHPSRLQSSPSPNSMKF---KRLGLVKNRLITRCTSGSDEFGCLNGIQL 64

Query: 64  TPNKLFMQEAIGAEYGEGFETFRADGPLKVDVDYLNDKLQDGFLKRIRYAMKPDEAYGLI 123
           TPNKLF+QEAIGAEYGEGFETFRADGPLKVDVDYLNDKLQDG L+RIRYAMKPDEAYGLI
Sbjct: 65  TPNKLFVQEAIGAEYGEGFETFRADGPLKVDVDYLNDKLQDGILQRIRYAMKPDEAYGLI 124

Query: 124 FSWDNVVADTRALKRKAWKQLASEEGKDIPEDGDIERLMRHAGADHVLHKLFLSDR 179
           FSWDNVVADTRALKRKAW QLASEEGKDIPED DIERLM + GAD+VL+K FLS++
Sbjct: 125 FSWDNVVADTRALKRKAWNQLASEEGKDIPEDADIERLMLNTGADNVLNKHFLSNK 180