Miyakogusa Predicted Gene

Lj0g3v0062789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0062789.1 Non Characterized Hit- tr|C5YXD0|C5YXD0_SORBI
Putative uncharacterized protein Sb09g018900
OS=Sorghu,43.7,0.000000000000001,CENTAURIN/ARF-RELATED,NULL;
CENTAURIN/ARF,NULL; seg,NULL,CUFF.2825.1
         (121 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g017500.1 | calcium-dependent ARF-type GTPase activating f...   125   8e-30
Medtr3g017500.2 | calcium-dependent ARF-type GTPase activating f...   124   3e-29
Medtr8g038400.1 | ADP-ribosylation factor GTPase-activating prot...   119   8e-28

>Medtr3g017500.1 | calcium-dependent ARF-type GTPase activating
           family protein | HC | chr3:4993371-4986754 | 20130731
          Length = 400

 Score =  125 bits (315), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 89/121 (73%), Gaps = 1/121 (0%)

Query: 1   MKKPKPHSSIEERSEFIRRKYELLQFMECGDNLSCQIVPSQGRSLTLAHSSSSCHHPPMD 60
           +KKPKP+SSIEERS+FIRRKYEL QF++  +NL C  +PS  R+ + +HSSSS ++PP +
Sbjct: 140 VKKPKPNSSIEERSDFIRRKYELQQFLDSEENLICPFIPSHSRTTSSSHSSSSSYNPPQE 199

Query: 61  KKHYEKKPTKHHIGLTFRNSRGRXXXXXXXXXXXXXXLAGMVEFVGLIKVTVVKGKHLAV 120
           KK Y+K+ T++ IGL+FRNS GR              LAGMVEFVGLIKV VVKG +LA+
Sbjct: 200 KKRYDKQTTRNRIGLSFRNSWGR-KDSESKSTKKSNSLAGMVEFVGLIKVNVVKGTNLAI 258

Query: 121 R 121
           R
Sbjct: 259 R 259


>Medtr3g017500.2 | calcium-dependent ARF-type GTPase activating
           family protein | HC | chr3:4993371-4986754 | 20130731
          Length = 370

 Score =  124 bits (310), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 69/121 (57%), Positives = 89/121 (73%), Gaps = 1/121 (0%)

Query: 1   MKKPKPHSSIEERSEFIRRKYELLQFMECGDNLSCQIVPSQGRSLTLAHSSSSCHHPPMD 60
           +KKPKP+SSIEERS+FIRRKYEL QF++  +NL C  +PS  R+ + +HSSSS ++PP +
Sbjct: 110 VKKPKPNSSIEERSDFIRRKYELQQFLDSEENLICPFIPSHSRTTSSSHSSSSSYNPPQE 169

Query: 61  KKHYEKKPTKHHIGLTFRNSRGRXXXXXXXXXXXXXXLAGMVEFVGLIKVTVVKGKHLAV 120
           KK Y+K+ T++ IGL+FRNS GR              LAGMVEFVGLIKV VVKG +LA+
Sbjct: 170 KKRYDKQTTRNRIGLSFRNSWGR-KDSESKSTKKSNSLAGMVEFVGLIKVNVVKGTNLAI 228

Query: 121 R 121
           R
Sbjct: 229 R 229


>Medtr8g038400.1 | ADP-ribosylation factor GTPase-activating protein
           AGD10 | HC | chr8:14246255-14251399 | 20130731
          Length = 367

 Score =  119 bits (297), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/122 (59%), Positives = 83/122 (68%), Gaps = 2/122 (1%)

Query: 1   MKKPKPHSSIEERSEFIRRKYELLQFM-ECGDNLSCQIVPSQGRSLTLAHSSSSCHHPPM 59
           +KKPKPH+SIEERSE+IR+KYE LQFM E  +N  C  VPSQGRS++L  SSSSC+   +
Sbjct: 106 IKKPKPHTSIEERSEYIRKKYEELQFMMESDENSLCPFVPSQGRSVSLGPSSSSCYTYHI 165

Query: 60  DKKHYEKKPTKHHIGLTFRNSRGRXXXXXXXXXXXXXXLAGMVEFVGLIKVTVVKGKHLA 119
           D K YEK  T+HHIG  FR S  R              LAGMVEFVGLIKV V KG HLA
Sbjct: 166 DNKKYEKALTRHHIGHAFRKSWTR-KDSEHKCSKKSTSLAGMVEFVGLIKVNVRKGTHLA 224

Query: 120 VR 121
           +R
Sbjct: 225 IR 226