Miyakogusa Predicted Gene
- Lj0g3v0061899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0061899.1 Non Characterized Hit- tr|Q00X15|Q00X15_OSTTA
Putative NPSN12 (ISS) OS=Ostreococcus tauri
GN=Ot13g01,51.14,2e-19,seg,NULL; Helical region found in SNAREs,Target
SNARE coiled-coil domain; no description,NULL; Sec20,CUFF.2773.1
(131 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g099140.1 | novel plant SNARE-like protein | HC | chr4:410... 201 1e-52
Medtr4g123910.1 | novel plant SNARE-like protein | HC | chr4:510... 166 6e-42
Medtr2g045960.1 | novel plant SNARE-like protein | HC | chr2:201... 160 2e-40
>Medtr4g099140.1 | novel plant SNARE-like protein | HC |
chr4:41060024-41054160 | 20130731
Length = 263
Score = 201 bits (512), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/131 (74%), Positives = 108/131 (82%), Gaps = 2/131 (1%)
Query: 1 MTNEQLFDHGHQMMDETDQAIERGKKVVLETVNVGTETAAALKAQTEQMSRVVNELDSIH 60
M+NEQL DHG++MMD+TDQAIERGK++V +TVN+GTETAAALKAQTEQMSRVVNELDSIH
Sbjct: 132 MSNEQLMDHGNRMMDDTDQAIERGKRIVQDTVNIGTETAAALKAQTEQMSRVVNELDSIH 191
Query: 61 FSIKKASKLVKEIGRQVATDKCIMAXXXXXXXXXXXXXXXXXXHPNNKDIRDIPGLAPPV 120
FSIKKASKLVKEIGRQVATDKCIMA HP NKDIRDIPGLAPPV
Sbjct: 192 FSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVHPENKDIRDIPGLAPPV 251
Query: 121 M--NRRLLWSH 129
+ NRRLLW+H
Sbjct: 252 VTNNRRLLWNH 262
>Medtr4g123910.1 | novel plant SNARE-like protein | HC |
chr4:51088786-51082714 | 20130731
Length = 269
Score = 166 bits (420), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 96/127 (75%)
Query: 1 MTNEQLFDHGHQMMDETDQAIERGKKVVLETVNVGTETAAALKAQTEQMSRVVNELDSIH 60
M+N++L + G + MDETDQAIER K+VV +T+ VGT+TA+ LK QTEQM R+VNELDSI
Sbjct: 135 MSNQELVNAGMKTMDETDQAIERSKQVVHQTIEVGTQTASTLKGQTEQMGRIVNELDSIQ 194
Query: 61 FSIKKASKLVKEIGRQVATDKCIMAXXXXXXXXXXXXXXXXXXHPNNKDIRDIPGLAPPV 120
FSIKKAS+LVKEIGRQVATDKCIM +PNNKDIRDIPGLAPPV
Sbjct: 195 FSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIRDIPGLAPPV 254
Query: 121 MNRRLLW 127
+RRLL+
Sbjct: 255 PSRRLLY 261
>Medtr2g045960.1 | novel plant SNARE-like protein | HC |
chr2:20128956-20137992 | 20130731
Length = 265
Score = 160 bits (406), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 94/127 (74%)
Query: 1 MTNEQLFDHGHQMMDETDQAIERGKKVVLETVNVGTETAAALKAQTEQMSRVVNELDSIH 60
M+N++L + G + MDETDQAIER K+VV +T+ VGT+TA LK QTEQM R+VNELDSI
Sbjct: 135 MSNQELINAGTKTMDETDQAIERSKQVVHQTIEVGTQTATTLKGQTEQMGRIVNELDSIQ 194
Query: 61 FSIKKASKLVKEIGRQVATDKCIMAXXXXXXXXXXXXXXXXXXHPNNKDIRDIPGLAPPV 120
FSIKKAS+LVKEIGR+VATDKCIM +P+NKDIRDIPGLAPPV
Sbjct: 195 FSIKKASQLVKEIGRKVATDKCIMLFLFLIVCGVIAIIVVKIVNPHNKDIRDIPGLAPPV 254
Query: 121 MNRRLLW 127
RRLL+
Sbjct: 255 PTRRLLY 261