Miyakogusa Predicted Gene

Lj0g3v0061899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0061899.1 Non Characterized Hit- tr|Q00X15|Q00X15_OSTTA
Putative NPSN12 (ISS) OS=Ostreococcus tauri
GN=Ot13g01,51.14,2e-19,seg,NULL; Helical region found in SNAREs,Target
SNARE coiled-coil domain; no description,NULL; Sec20,CUFF.2773.1
         (131 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g099140.1 | novel plant SNARE-like protein | HC | chr4:410...   201   1e-52
Medtr4g123910.1 | novel plant SNARE-like protein | HC | chr4:510...   166   6e-42
Medtr2g045960.1 | novel plant SNARE-like protein | HC | chr2:201...   160   2e-40

>Medtr4g099140.1 | novel plant SNARE-like protein | HC |
           chr4:41060024-41054160 | 20130731
          Length = 263

 Score =  201 bits (512), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 98/131 (74%), Positives = 108/131 (82%), Gaps = 2/131 (1%)

Query: 1   MTNEQLFDHGHQMMDETDQAIERGKKVVLETVNVGTETAAALKAQTEQMSRVVNELDSIH 60
           M+NEQL DHG++MMD+TDQAIERGK++V +TVN+GTETAAALKAQTEQMSRVVNELDSIH
Sbjct: 132 MSNEQLMDHGNRMMDDTDQAIERGKRIVQDTVNIGTETAAALKAQTEQMSRVVNELDSIH 191

Query: 61  FSIKKASKLVKEIGRQVATDKCIMAXXXXXXXXXXXXXXXXXXHPNNKDIRDIPGLAPPV 120
           FSIKKASKLVKEIGRQVATDKCIMA                  HP NKDIRDIPGLAPPV
Sbjct: 192 FSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVHPENKDIRDIPGLAPPV 251

Query: 121 M--NRRLLWSH 129
           +  NRRLLW+H
Sbjct: 252 VTNNRRLLWNH 262


>Medtr4g123910.1 | novel plant SNARE-like protein | HC |
           chr4:51088786-51082714 | 20130731
          Length = 269

 Score =  166 bits (420), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 81/127 (63%), Positives = 96/127 (75%)

Query: 1   MTNEQLFDHGHQMMDETDQAIERGKKVVLETVNVGTETAAALKAQTEQMSRVVNELDSIH 60
           M+N++L + G + MDETDQAIER K+VV +T+ VGT+TA+ LK QTEQM R+VNELDSI 
Sbjct: 135 MSNQELVNAGMKTMDETDQAIERSKQVVHQTIEVGTQTASTLKGQTEQMGRIVNELDSIQ 194

Query: 61  FSIKKASKLVKEIGRQVATDKCIMAXXXXXXXXXXXXXXXXXXHPNNKDIRDIPGLAPPV 120
           FSIKKAS+LVKEIGRQVATDKCIM                   +PNNKDIRDIPGLAPPV
Sbjct: 195 FSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIRDIPGLAPPV 254

Query: 121 MNRRLLW 127
            +RRLL+
Sbjct: 255 PSRRLLY 261


>Medtr2g045960.1 | novel plant SNARE-like protein | HC |
           chr2:20128956-20137992 | 20130731
          Length = 265

 Score =  160 bits (406), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/127 (62%), Positives = 94/127 (74%)

Query: 1   MTNEQLFDHGHQMMDETDQAIERGKKVVLETVNVGTETAAALKAQTEQMSRVVNELDSIH 60
           M+N++L + G + MDETDQAIER K+VV +T+ VGT+TA  LK QTEQM R+VNELDSI 
Sbjct: 135 MSNQELINAGTKTMDETDQAIERSKQVVHQTIEVGTQTATTLKGQTEQMGRIVNELDSIQ 194

Query: 61  FSIKKASKLVKEIGRQVATDKCIMAXXXXXXXXXXXXXXXXXXHPNNKDIRDIPGLAPPV 120
           FSIKKAS+LVKEIGR+VATDKCIM                   +P+NKDIRDIPGLAPPV
Sbjct: 195 FSIKKASQLVKEIGRKVATDKCIMLFLFLIVCGVIAIIVVKIVNPHNKDIRDIPGLAPPV 254

Query: 121 MNRRLLW 127
             RRLL+
Sbjct: 255 PTRRLLY 261