Miyakogusa Predicted Gene

Lj0g3v0061139.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0061139.1 Non Characterized Hit- tr|K4CMD6|K4CMD6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.42,4e-18,coiled-coil,NULL; seg,NULL; MYB_LIKE,Myb-like
domain,CUFF.2714.1
         (316 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g009220.1 | Myb/SANT-like DNA-binding domain protein | HC ...   277   9e-75

>Medtr1g009220.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr1:1232040-1235577 | 20130731
          Length = 319

 Score =  277 bits (709), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 164/302 (54%), Positives = 191/302 (63%), Gaps = 21/302 (6%)

Query: 25  ARGGRRTRSQVAPDWTVTESLILVNEIAAVEADCSAALSSYQQWEIIAGNCAALDIGRNL 84
           A G RRTRSQ AP+WT+TESLIL+NEIAAVEADCS   SSYQQW+II+ NCAALD+ RNL
Sbjct: 8   AVGSRRTRSQAAPEWTLTESLILLNEIAAVEADCSVNFSSYQQWDIISQNCAALDVDRNL 67

Query: 85  GQCRRKWYALLDEYH---NRGGPLNLDPELFEAIQRVVKARQERHQVDPESDPEPVNEDL 141
            QCRRKW +LL EY     R    NLD ELF+A++RVVK R+ER +VD ESD E  NE+ 
Sbjct: 68  AQCRRKWRSLLAEYEEVRRRRRAWNLDRELFDAVERVVKGREERGEVDRESDGELGNEER 127

Query: 142 DATLEI-----GXXXXXXXXXXERHRIQKPMKCQPVESSENLSEKQDQRDTLXXXXXXXX 196
           D T+EI     G          ER+ +QKP K  PVE SENL EKQ              
Sbjct: 128 DVTVEIDMIGTGFKRKRPRSKVERNSVQKPKKYWPVEPSENLKEKQ--------VPEEIH 179

Query: 197 XXXXXXXXXXXXYLKDFLEDKSKMKHTAKRPPKSIEMPLKSLAEAELHENHDVERPKLSS 256
                       +LKDFLE K K+K  AKR  K IE PL++L E + H  HD+E+PK +S
Sbjct: 180 EEVPENNHMEEEFLKDFLEKKPKLKSPAKRRQKHIETPLQNLPEVDKH--HDIEKPKPAS 237

Query: 257 RTAEITISREEVEKTLTLKLQELGIEIHEIGAESA---EAGSHNVEDDHTEFRRRQGDKF 313
                  SREE E+ LTLKLQEL IEI EI AESA   EA + N+ED  TEF RRQGDK 
Sbjct: 238 VGNITNNSREENEEMLTLKLQELAIEIQEISAESADCKEANTENIEDYRTEFTRRQGDKL 297

Query: 314 IA 315
           IA
Sbjct: 298 IA 299