Miyakogusa Predicted Gene

Lj0g3v0060729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0060729.1 Non Characterized Hit- tr|I3SZR7|I3SZR7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.17,0,Coprogen_oxidas,Coproporphyrinogen III oxidase, aerobic;
no description,Coproporphyrinogen III oxida,CUFF.2703.1
         (240 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g098800.1 | coproporphyrinogen III oxidase | HC | chr5:432...   470   e-133

>Medtr5g098800.1 | coproporphyrinogen III oxidase | HC |
           chr5:43267396-43273287 | 20130731
          Length = 399

 Score =  470 bits (1210), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/244 (94%), Positives = 235/244 (96%), Gaps = 4/244 (1%)

Query: 1   MPPDAYRAAKG----SADQKPGPVPFFAAGISSVLHPKNPHAPTLHFNYRYFETDAPKDA 56
           MPPDAYRAAKG    S+DQKPGP+PFFAAGISSVLHPKNP APTLHFNYRYFETDAPKDA
Sbjct: 156 MPPDAYRAAKGAAAASSDQKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDA 215

Query: 57  PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKRACDKFDPTFYPRFKKWCDDYFYIKHR 116
           PGAPRQWWFGGGTDLTPAYIFEEDVKHFHS QK+ACDKFDPTFYPRFKKWCDDYFYIKHR
Sbjct: 216 PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSVQKQACDKFDPTFYPRFKKWCDDYFYIKHR 275

Query: 117 GERRGLGGIFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDHQKAWQQLR 176
            ERRGLGGIFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKD PFTDHQKAWQQLR
Sbjct: 276 DERRGLGGIFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDLPFTDHQKAWQQLR 335

Query: 177 RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHKPEEGSEEWKLLDACMNP 236
           RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHKPE GSEEWKLLDAC+NP
Sbjct: 336 RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHKPEVGSEEWKLLDACINP 395

Query: 237 KEWI 240
           KEW+
Sbjct: 396 KEWL 399