Miyakogusa Predicted Gene

Lj0g3v0060599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0060599.1 Non Characterized Hit- tr|H6A2P4|H6A2P4_WHEAT
Putative uncharacterized protein OS=Triticum aestivum
,42.66,8e-16,seg,NULL;
coiled-coil,NULL,NODE_65586_length_979_cov_19.603678.path1.1
         (280 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g100100.1 | CA-responsive protein, putative | HC | chr2:42...   317   1e-86
Medtr8g016260.1 | transmembrane protein, putative | HC | chr8:54...   264   8e-71

>Medtr2g100100.1 | CA-responsive protein, putative | HC |
           chr2:42983390-42980060 | 20130731
          Length = 292

 Score =  317 bits (811), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 172/295 (58%), Positives = 194/295 (65%), Gaps = 18/295 (6%)

Query: 1   MHDPIXXXXXXXXXXXXXXXXXXYKRFSKHPTEENKQNRHKDGLTRPENSDPVRSVLMGG 60
           MH PI                  YKRFSK P + N++ +  D    P   DP+    +  
Sbjct: 1   MHHPIFLFASLSLLSLTILFFSLYKRFSK-PHKHNQKTKLSDN--SPSQPDPISPTHLSK 57

Query: 61  ALXXXXXXXXXXXXXXXXXXXXXXXXVNSGAE---------------EKNESSDPGSDSG 105
           ++                        V S  +               E  E    G DSG
Sbjct: 58  SILFEVLPSDSAKWDTLFDDPDSVLEVPSEKKKRRKKKAKKKKEMNSESEECVKAGFDSG 117

Query: 106 VRFETACLYPFTSSSSAMQRKIKQQYDELVKSNDSKKLTLAQVVQFANSLVDARDELQHK 165
           V+ E+ C+YPFTSSSS +QRKIK QYDELVKSN+SKKLTL QVV+FANSL+DAR+ELQHK
Sbjct: 118 VKLESDCMYPFTSSSSVLQRKIKLQYDELVKSNESKKLTLPQVVRFANSLIDARNELQHK 177

Query: 166 ADAIQRKFIITKALLCKANRSSFDRLHQQIYKLELEQKRLEEDAFVYNSLQQQLKLSPAY 225
           AD IQRKF+ITKALLCKA+RSSFDRLHQQIYKLELEQKRLEEDAFVYNSLQ QLKLSPAY
Sbjct: 178 ADVIQRKFVITKALLCKADRSSFDRLHQQIYKLELEQKRLEEDAFVYNSLQYQLKLSPAY 237

Query: 226 QKMLELGACMEKEKSCGHGDNRDDEFAEISFEELLAQEKKDSFWQKNGKSRLCSS 280
           +KMLELGAC EK K C   DN DDEFA+ISFEELLAQEKKDSFWQKNGKSR+CSS
Sbjct: 238 KKMLELGACTEKAKQCEQVDNIDDEFADISFEELLAQEKKDSFWQKNGKSRVCSS 292


>Medtr8g016260.1 | transmembrane protein, putative | HC |
           chr8:5465650-5467702 | 20130731
          Length = 283

 Score =  264 bits (674), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 130/177 (73%), Positives = 149/177 (84%)

Query: 104 SGVRFETACLYPFTSSSSAMQRKIKQQYDELVKSNDSKKLTLAQVVQFANSLVDARDELQ 163
           S  R E   L  FT  SS MQ+K+K QYD +VK N+SKKLT++QVVQFANSLVDAR ELQ
Sbjct: 107 SDTRPELGALDLFTPCSSFMQKKMKPQYDNIVKCNESKKLTISQVVQFANSLVDARSELQ 166

Query: 164 HKADAIQRKFIITKALLCKANRSSFDRLHQQIYKLELEQKRLEEDAFVYNSLQQQLKLSP 223
           HKA+A QRKF+I KALLCKA+ SSFDRL QQ+YKLELE+KRLEEDAFVYN LQQQLKLSP
Sbjct: 167 HKAEATQRKFVIAKALLCKADISSFDRLRQQVYKLELERKRLEEDAFVYNWLQQQLKLSP 226

Query: 224 AYQKMLELGACMEKEKSCGHGDNRDDEFAEISFEELLAQEKKDSFWQKNGKSRLCSS 280
           AY +MLE+G  MEKEKSC  G+ +D+EF++ISFEELL QEKKDSFWQ+NGKSR CSS
Sbjct: 227 AYNRMLEIGVSMEKEKSCKMGERKDEEFSDISFEELLTQEKKDSFWQRNGKSRQCSS 283