Miyakogusa Predicted Gene

Lj0g3v0060169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0060169.1 tr|A4S7P2|A4S7P2_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_18155,37.5,3e-18,FYVE/PHD zinc finger,Zinc finger,
FYVE/PHD-type; RING/U-box,NULL; ZF_RING_1,Zinc finger, RING-type,
,NODE_62393_length_2807_cov_10.026362.path1.1
         (594 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g112410.1 | poxvirus Ag35 surface protein | HC | chr7:4619...   677   0.0  
Medtr7g112410.2 | poxvirus Ag35 surface protein | HC | chr7:4619...   567   e-162
Medtr4g110090.1 | PHD-finger protein, putative | HC | chr4:45846...   134   3e-31
Medtr8g099585.1 | RING/U-box protein | HC | chr8:42080666-420907...    71   3e-12
Medtr6g007650.1 | methyl-CpG-binding domain protein | HC | chr6:...    55   1e-07
Medtr0001s0570.5 | RING/FYVE/PHD zinc finger protein, putative |...    50   8e-06
Medtr0001s0570.3 | RING/FYVE/PHD zinc finger protein, putative |...    50   8e-06
Medtr5g010300.4 | transcription factor jumonji (JmjC) domain pro...    50   9e-06
Medtr5g010300.1 | transcription factor jumonji (JmjC) domain pro...    50   9e-06
Medtr5g010300.2 | transcription factor jumonji (JmjC) domain pro...    50   9e-06
Medtr5g010300.3 | transcription factor jumonji (JmjC) domain pro...    49   1e-05
Medtr0001s0570.2 | RING/FYVE/PHD zinc finger protein, putative |...    49   1e-05
Medtr0001s0570.4 | RING/FYVE/PHD zinc finger protein, putative |...    49   1e-05

>Medtr7g112410.1 | poxvirus Ag35 surface protein | HC |
           chr7:46190529-46186663 | 20130731
          Length = 904

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/622 (58%), Positives = 409/622 (65%), Gaps = 49/622 (7%)

Query: 17  NMGLRRKVKCASEDDFIDNDPTITTTCXXXXXXXXXXXXXXXXXXCAPSEA--SDFEFTI 74
           N G  RKV+C   DDF+DN P I T                     +  E+  SD+EFTI
Sbjct: 288 NGGSTRKVQCDDADDFLDNVPAIRTNSRKRSVLKRRRVILEDANSGSDCESRPSDYEFTI 347

Query: 75  SXXXXXXXXXAKKLCGXXXXXXXXXXXXXXXEEAVVHEDXXXXXXXXXXXXXXXXXXXQV 134
           S         A +LCG               E   ++ED                   Q 
Sbjct: 348 SEEEKEQVREAVQLCGNIRRNLRRASLRMENEVVGLYEDLHQQWKPPARKGKEKIEESQG 407

Query: 135 RKGKEKMEDLKSEVVKQVCGICLSEEDRRRVRGVLNCCTHYFCFACIMEWGKVESRCPVC 194
           RKGKEK+EDLKSEV KQVCGICLSEE++RRVRGVLN CTHYFCFACIMEW KVESRCP+C
Sbjct: 408 RKGKEKVEDLKSEVGKQVCGICLSEENKRRVRGVLNSCTHYFCFACIMEWSKVESRCPLC 467

Query: 195 KQRFKTISKPARSSKGVELREMVIQVPERDQVYQPSEEELRSYIDPYDSVICSECLQGGD 254
           KQRF+TISKPARS+      E VIQVPERDQVYQP+EEELRSYIDPY+SV+CSEC  GGD
Sbjct: 468 KQRFQTISKPARSTTA---EEAVIQVPERDQVYQPTEEELRSYIDPYESVMCSECHLGGD 524

Query: 255 DGLMLLCDVCDSPAHTYCVGLGREVPEGNWYCDGCRPVALGTSSSQAQEADPIATIQSLH 314
           DGLMLLCD+CDSPAHTYCVGLGREVPEGNWYCDGCRPVAL + +SQAQE+D  A  QSL 
Sbjct: 525 DGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALASLNSQAQESDLRAATQSLP 584

Query: 315 VRPSPVHVRESIDLNLIXXXXXX-------XXXXXXXXXXVEGVSPVSGG-APTLSERRW 366
            RPSPVH+RESIDLNL+                        EG SP+SGG APTLSERRW
Sbjct: 585 SRPSPVHIRESIDLNLMSSPHTSFSQGFGHLSSSRFSGRSTEGASPMSGGGAPTLSERRW 644

Query: 367 IHRXXXXX-----XSMDRMTSTTGRTNGISAISSTSDLYSSQIDQSRETSSQFARTEDVG 421
           IHR           S+DRM STTGRTNG+SA  + S+L SS+I+  RE SSQ  RT+DVG
Sbjct: 645 IHRQVQQLQIQQLRSIDRMASTTGRTNGVSATGTLSNLNSSEIN--REPSSQHIRTQDVG 702

Query: 422 TSYHTFFAERLRNNISPLMQN----------------------------EALWPRLLGTP 453
           TSYHTFF ERL NNISP MQN                             A+WP +LGT 
Sbjct: 703 TSYHTFFEERLGNNISPFMQNGDPFSIRMSNSRGPVVQDSTMFSNGPVNAAIWPEILGTS 762

Query: 454 PVPNYEQALQ-FNRSNIVPDGSSFPAVKEESNFHLVHEQLESMVTSHLKSLSQNIDLGQS 512
            + +Y       +RSNIV +      VKEE N H+V E+L+SMV SHLK LSQ+ DLG S
Sbjct: 763 TLSDYGPIHPCSSRSNIVTEVGIPATVKEEDNLHIVKERLQSMVKSHLKRLSQDADLGYS 822

Query: 513 TFMDIAKSCMHTILAACGLEHMKSEVCTVPPPSVCPHIEMMAGGQSSLIKGCCSSCFDSF 572
           TF DIA+S  HTILAACGLEH  SEVCTVPPPSVCPHIE++AGGQ S+IKGCCSSCFDSF
Sbjct: 823 TFKDIARSSTHTILAACGLEHNTSEVCTVPPPSVCPHIELIAGGQMSMIKGCCSSCFDSF 882

Query: 573 VGEVVKRILDTRVSSQWLRLGL 594
           VG+VVK ILDTR+SSQWLRLGL
Sbjct: 883 VGDVVKSILDTRMSSQWLRLGL 904


>Medtr7g112410.2 | poxvirus Ag35 surface protein | HC |
           chr7:46190529-46186663 | 20130731
          Length = 865

 Score =  567 bits (1462), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 312/565 (55%), Positives = 354/565 (62%), Gaps = 49/565 (8%)

Query: 17  NMGLRRKVKCASEDDFIDNDPTITTTCXXXXXXXXXXXXXXXXXXCAPSEA--SDFEFTI 74
           N G  RKV+C   DDF+DN P I T                     +  E+  SD+EFTI
Sbjct: 288 NGGSTRKVQCDDADDFLDNVPAIRTNSRKRSVLKRRRVILEDANSGSDCESRPSDYEFTI 347

Query: 75  SXXXXXXXXXAKKLCGXXXXXXXXXXXXXXXEEAVVHEDXXXXXXXXXXXXXXXXXXXQV 134
           S         A +LCG               E   ++ED                   Q 
Sbjct: 348 SEEEKEQVREAVQLCGNIRRNLRRASLRMENEVVGLYEDLHQQWKPPARKGKEKIEESQG 407

Query: 135 RKGKEKMEDLKSEVVKQVCGICLSEEDRRRVRGVLNCCTHYFCFACIMEWGKVESRCPVC 194
           RKGKEK+EDLKSEV KQVCGICLSEE++RRVRGVLN CTHYFCFACIMEW KVESRCP+C
Sbjct: 408 RKGKEKVEDLKSEVGKQVCGICLSEENKRRVRGVLNSCTHYFCFACIMEWSKVESRCPLC 467

Query: 195 KQRFKTISKPARSSKGVELREMVIQVPERDQVYQPSEEELRSYIDPYDSVICSECLQGGD 254
           KQRF+TISKPARS+      E VIQVPERDQVYQP+EEELRSYIDPY+SV+CSEC  GGD
Sbjct: 468 KQRFQTISKPARSTTA---EEAVIQVPERDQVYQPTEEELRSYIDPYESVMCSECHLGGD 524

Query: 255 DGLMLLCDVCDSPAHTYCVGLGREVPEGNWYCDGCRPVALGTSSSQAQEADPIATIQSLH 314
           DGLMLLCD+CDSPAHTYCVGLGREVPEGNWYCDGCRPVAL + +SQAQE+D  A  QSL 
Sbjct: 525 DGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALASLNSQAQESDLRAATQSLP 584

Query: 315 VRPSPVHVRESIDLNLIXXXXXX-------XXXXXXXXXXVEGVSPVSGG-APTLSERRW 366
            RPSPVH+RESIDLNL+                        EG SP+SGG APTLSERRW
Sbjct: 585 SRPSPVHIRESIDLNLMSSPHTSFSQGFGHLSSSRFSGRSTEGASPMSGGGAPTLSERRW 644

Query: 367 IHRXXXXX-----XSMDRMTSTTGRTNGISAISSTSDLYSSQIDQSRETSSQFARTEDVG 421
           IHR           S+DRM STTGRTNG+SA  + S+L SS+I+  RE SSQ  RT+DVG
Sbjct: 645 IHRQVQQLQIQQLRSIDRMASTTGRTNGVSATGTLSNLNSSEIN--REPSSQHIRTQDVG 702

Query: 422 TSYHTFFAERLRNNISPLMQN----------------------------EALWPRLLGTP 453
           TSYHTFF ERL NNISP MQN                             A+WP +LGT 
Sbjct: 703 TSYHTFFEERLGNNISPFMQNGDPFSIRMSNSRGPVVQDSTMFSNGPVNAAIWPEILGTS 762

Query: 454 PVPNYEQALQ-FNRSNIVPDGSSFPAVKEESNFHLVHEQLESMVTSHLKSLSQNIDLGQS 512
            + +Y       +RSNIV +      VKEE N H+V E+L+SMV SHLK LSQ+ DLG S
Sbjct: 763 TLSDYGPIHPCSSRSNIVTEVGIPATVKEEDNLHIVKERLQSMVKSHLKRLSQDADLGYS 822

Query: 513 TFMDIAKSCMHTILAACGLEHMKSE 537
           TF DIA+S  HTILAACGLEH  SE
Sbjct: 823 TFKDIARSSTHTILAACGLEHNTSE 847


>Medtr4g110090.1 | PHD-finger protein, putative | HC |
           chr4:45846699-45843403 | 20130731
          Length = 614

 Score =  134 bits (337), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 90/152 (59%), Gaps = 14/152 (9%)

Query: 153 CGICLSEEDRRRVRGV-----LNCCTHYFCFACIMEWGKVESRCPVCKQRFKTISKPARS 207
           CGIC  E      RG+     ++CC+HYFCF CIMEW K ESRCP+C+QRF  + +    
Sbjct: 34  CGICYIE------RGISVPAQIDCCSHYFCFVCIMEWAKHESRCPLCRQRFSNVRRLPMH 87

Query: 208 SKGVELREMVIQVPERDQVYQPSEEELRSYIDPYDSVICSECLQGGDDGLMLLCDVCDSP 267
                 R+  +++P RDQVY P        +D      C  C    D+ L+L+CD+CD+ 
Sbjct: 88  DVFSSSRD--VKIPIRDQVYHPHGNMTSGPVDSNAERKCCICDGAKDENLILICDLCDTV 145

Query: 268 AHTYCVGLGREVPEGNWYCDGCRPVALGTSSS 299
           +HT+CVGLG  VPEG+W+C  C  V+L T++S
Sbjct: 146 SHTFCVGLGYTVPEGDWFCHDC-AVSLETNAS 176



 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 491 QLESMVTSHLKSLSQNIDLGQSTFMDIAKSCMHTILAACGLEHMKSEVCTVPPPSVCPHI 550
           +++S+V  +L  L+ N  LG  TF  +A+   HTILAAC  E  KS +      SVC H 
Sbjct: 520 EIQSLVKLNLNCLAINKQLGVETFKVVARQATHTILAACHSEQQKSNI--YSSNSVCSHT 577

Query: 551 EMMAGGQSSLIKGCCSSCFDSFVGEVVKRILD 582
           + +   +S+L+  CC  CF  FV +VVK +L+
Sbjct: 578 DHIQFQKSNLMPNCCRQCFHVFVNDVVKSMLE 609


>Medtr8g099585.1 | RING/U-box protein | HC | chr8:42080666-42090727
           | 20130731
          Length = 1270

 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 19/158 (12%)

Query: 148 VVKQVCGICLSEEDRRRVRGVLNCCTHYFCFACIMEWGKVESRCPVCKQRFKTIS-KPAR 206
           V  + CGIC+   D    RGVL+CC H+FCF CI  W  + + CP+C+  F+ I+  P  
Sbjct: 29  VEGETCGICM---DMVIDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVY 85

Query: 207 SSKGVELREMVIQVPERDQVYQPSEEELR--SYIDPYDSVICSEC----LQGG------D 254
            + G    E      + D         L   SY    ++V C +     ++ G      D
Sbjct: 86  DTIGSNKVEDGSFFRDDDWSIDGKNNNLSFPSYYIDENAVTCLDGDGCKIRNGFASVEED 145

Query: 255 DGL--MLLCDVCDSPAHTYCVGLGRE-VPEGNWYCDGC 289
            GL   + CD CD   H +CVG   E   E  W C  C
Sbjct: 146 SGLDTSIACDSCDLWYHAFCVGFDTEGTSESTWLCPRC 183


>Medtr6g007650.1 | methyl-CpG-binding domain protein | HC |
            chr6:1748720-1735614 | 20130731
          Length = 2161

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 240  PYDSVICSECLQGGDDGLMLLCDVCDSPAHTYCVG--LGREVPEGNWYCDGC 289
            P+D  +C  C    DD  +LLCD CD+  H YC+   L R +PEGNWYC  C
Sbjct: 1240 PWDEGVCKICGIDRDDDSVLLCDTCDAEYHKYCLNPPLAR-IPEGNWYCPSC 1290


>Medtr0001s0570.5 | RING/FYVE/PHD zinc finger protein, putative | HC
           | scaffold0001:431394-437206 | 20130731
          Length = 1231

 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 226 VYQPSEEELRSYIDPYDSVICSECLQGGDDGLMLLCDVC-DSPAHTYCV-GLGREVPEGN 283
           V QP +E   S    +D  +C  C   G + L+ +C  C D   HTYC+  +  +VPEG+
Sbjct: 83  VPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEKVPEGD 142

Query: 284 WYCDGCR 290
           W+C+ C+
Sbjct: 143 WFCEECQ 149


>Medtr0001s0570.3 | RING/FYVE/PHD zinc finger protein, putative | HC
           | scaffold0001:431394-437206 | 20130731
          Length = 1231

 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 226 VYQPSEEELRSYIDPYDSVICSECLQGGDDGLMLLCDVC-DSPAHTYCV-GLGREVPEGN 283
           V QP +E   S    +D  +C  C   G + L+ +C  C D   HTYC+  +  +VPEG+
Sbjct: 83  VPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEKVPEGD 142

Query: 284 WYCDGCR 290
           W+C+ C+
Sbjct: 143 WFCEECQ 149


>Medtr5g010300.4 | transcription factor jumonji (JmjC) domain
           protein | HC | chr5:2711113-2732094 | 20130731
          Length = 1586

 Score = 49.7 bits (117), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 245 ICSECLQGGDDGLMLLCDVCDSPAHTYCVGLG-REVPEGNWYCDGC 289
           IC +C  G    +MLLCD CD   H YC+    +++P GNWYC  C
Sbjct: 244 ICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNC 289


>Medtr5g010300.1 | transcription factor jumonji (JmjC) domain
           protein | HC | chr5:2711113-2733852 | 20130731
          Length = 1832

 Score = 49.7 bits (117), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 245 ICSECLQGGDDGLMLLCDVCDSPAHTYCVGLG-REVPEGNWYCDGC 289
           IC +C  G    +MLLCD CD   H YC+    +++P GNWYC  C
Sbjct: 244 ICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNC 289


>Medtr5g010300.2 | transcription factor jumonji (JmjC) domain
           protein | HC | chr5:2711113-2732094 | 20130731
          Length = 1590

 Score = 49.7 bits (117), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 245 ICSECLQGGDDGLMLLCDVCDSPAHTYCVGLG-REVPEGNWYCDGC 289
           IC +C  G    +MLLCD CD   H YC+    +++P GNWYC  C
Sbjct: 244 ICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNC 289


>Medtr5g010300.3 | transcription factor jumonji (JmjC) domain
           protein | HC | chr5:2711113-2733813 | 20130731
          Length = 1774

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 245 ICSECLQGGDDGLMLLCDVCDSPAHTYCVGLG-REVPEGNWYCDGC 289
           IC +C  G    +MLLCD CD   H YC+    +++P GNWYC  C
Sbjct: 244 ICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNC 289


>Medtr0001s0570.2 | RING/FYVE/PHD zinc finger protein, putative | HC
           | scaffold0001:430905-437206 | 20130731
          Length = 1394

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 226 VYQPSEEELRSYIDPYDSVICSECLQGGDDGLMLLCDVC-DSPAHTYCV-GLGREVPEGN 283
           V QP +E   S    +D  +C  C   G + L+ +C  C D   HTYC+  +  +VPEG+
Sbjct: 246 VPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEKVPEGD 305

Query: 284 WYCDGCR 290
           W+C+ C+
Sbjct: 306 WFCEECQ 312


>Medtr0001s0570.4 | RING/FYVE/PHD zinc finger protein, putative | HC
           | scaffold0001:430905-437206 | 20130731
          Length = 1394

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 226 VYQPSEEELRSYIDPYDSVICSECLQGGDDGLMLLCDVC-DSPAHTYCV-GLGREVPEGN 283
           V QP +E   S    +D  +C  C   G + L+ +C  C D   HTYC+  +  +VPEG+
Sbjct: 246 VPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEKVPEGD 305

Query: 284 WYCDGCR 290
           W+C+ C+
Sbjct: 306 WFCEECQ 312