Miyakogusa Predicted Gene

Lj0g3v0060129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0060129.1 Non Characterized Hit- tr|I1NJ45|I1NJ45_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,89.3,0,SUBFAMILY NOT
NAMED,NULL; SYNTAXIN,NULL; SNARE,Target SNARE coiled-coil domain;
Syntaxin,Syntaxin, N,NODE_69111_length_1537_cov_29.936890.path1.1
         (323 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g083790.1 | syntaxin of plants protein | HC | chr1:3729871...   567   e-162
Medtr7g109165.1 | syntaxin of plants protein | HC | chr7:4462452...   382   e-106
Medtr7g084590.1 | syntaxin of plants protein | HC | chr7:3263932...    69   7e-12
Medtr8g066340.1 | syntaxin of plants protein | HC | chr8:2758912...    50   2e-06
Medtr5g029650.1 | syntaxin of plants protein | HC | chr5:1245872...    50   4e-06

>Medtr1g083790.1 | syntaxin of plants protein | HC |
           chr1:37298710-37303799 | 20130731
          Length = 376

 Score =  567 bits (1462), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/315 (87%), Positives = 294/315 (93%), Gaps = 2/315 (0%)

Query: 1   MATRNRTLLFRKHRDALKSVRFXXXXXXXXXXX--GPVIELVSTSLLNPNRSYTPLSTED 58
           MATRNRTL+FRK+RDALKSVR              GPVIELVSTSLLNPNRSY PLST+D
Sbjct: 1   MATRNRTLIFRKYRDALKSVRAPSSSSPPSTSSRGGPVIELVSTSLLNPNRSYAPLSTDD 60

Query: 59  PANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMPSFGDGKEDQH 118
           P  SSKG  PITVGLPPAWVDVSEEISANVQRAR+KMAEL+KAHAKALMPSFGDGK+DQH
Sbjct: 61  PGGSSKGLNPITVGLPPAWVDVSEEISANVQRARTKMAELSKAHAKALMPSFGDGKDDQH 120

Query: 119 AIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTY 178
           AIESLT+E+TDLIKRSEK+LRRL++AGPSEDSNVRKNVQRSLATDLQ+LSV+LRKKQSTY
Sbjct: 121 AIESLTHEVTDLIKRSEKRLRRLASAGPSEDSNVRKNVQRSLATDLQSLSVDLRKKQSTY 180

Query: 179 LKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNMVFSEHQMAKLKKSEAFTVEREKEIQ 238
           LKRLRQQKEG DGVDLEIN+NG KS+YEDDDLDNM+F+EHQMAKLKKSEAFTVEREKEIQ
Sbjct: 181 LKRLRQQKEGHDGVDLEINMNGSKSKYEDDDLDNMIFNEHQMAKLKKSEAFTVEREKEIQ 240

Query: 239 QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKGGM 298
           QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKGGM
Sbjct: 241 QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKGGM 300

Query: 299 VMCATVLLIMCFVML 313
           VMCA+VLLIMCFVML
Sbjct: 301 VMCASVLLIMCFVML 315


>Medtr7g109165.1 | syntaxin of plants protein | HC |
           chr7:44624523-44629883 | 20130731
          Length = 404

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/313 (64%), Positives = 243/313 (77%), Gaps = 6/313 (1%)

Query: 1   MATRNRTLLFRKHRDALKSVRF-XXXXXXXXXXXGPVIELVSTSLLNPNR--SYTPLSTE 57
           MATRNRT+ FRK+RD++KS+R             GPVIE+V+TSLL  N   SYTPLST 
Sbjct: 1   MATRNRTVEFRKYRDSVKSLRTPLSSSASASSGGGPVIEMVNTSLLRTNNGSSYTPLSTH 60

Query: 58  DPANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMPSFGDGKEDQ 117
           DP  SS  +   TVGLPP+WVD SEEI+ N+Q A+ KM+EL KAHAKALMPSFGDGK+DQ
Sbjct: 61  DPGPSS-SSDAFTVGLPPSWVDDSEEIATNIQSAKVKMSELTKAHAKALMPSFGDGKDDQ 119

Query: 118 HAIESLTYEITDLIKRSEKKLRRLSAA-GPSEDSNVRKNVQRSLATDLQNLSVELRKKQS 176
             IE+LT EIT L+++SE +L+RLSA  G SEDSNVRKNVQRSLATDLQNLS++LR+KQS
Sbjct: 120 RQIETLTREITALLRKSEVRLKRLSAGRGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQS 179

Query: 177 TYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNMVFSEHQMAKLKKSEAFTVEREKE 236
           TYLKRL+QQ+EG DG+DLE+N  G  S ++DD+ D++ FSE QM KLKK+E  + ERE+E
Sbjct: 180 TYLKRLQQQQEGYDGIDLEMNFKGSSSGFQDDEFDDVGFSEEQMTKLKKNEHISAERERE 239

Query: 237 IQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKG 296
           I QV +SV+ELAQIMKDLSVLVIDQGTIVDRIDYNIQ+VATTVE+GLKQLQK   +    
Sbjct: 240 IDQVAKSVHELAQIMKDLSVLVIDQGTIVDRIDYNIQSVATTVEEGLKQLQKVLFSLTFL 299

Query: 297 GMVMCATVLLIMC 309
               C  + L +C
Sbjct: 300 NYYFCK-IFLGLC 311


>Medtr7g084590.1 | syntaxin of plants protein | HC |
           chr7:32639320-32642331 | 20130731
          Length = 266

 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 14/232 (6%)

Query: 99  AKAHAKALMPSFG---DGKEDQHAIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKN 155
           A A  + L+ S G   D  E +  + +    I+ L+K +  KL+ LS +    ++N  K 
Sbjct: 34  AVATFRRLVDSVGTVKDTPEHRQKLHNTRQRISQLVKDTSAKLKSLSESNRDSNANANKK 93

Query: 156 VQRS-LATDLQNLSVELRKKQSTYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNMV 214
           ++ + LA D Q    E +K Q    +R            L  +   G+   E D  ++  
Sbjct: 94  IEDAKLARDFQTTLQEFQKVQQLASERESAYTPAAPASSLPTSSGPGEQSIEIDP-ESQP 152

Query: 215 FSEHQMAK--------LKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVD 266
               QM +        +  +EA   ER++ ++++ E + E  +I KDL+VLV DQG ++D
Sbjct: 153 LVRGQMRQELHLLDNEISFNEAMIEERDQGLREIEEQIGEANEIFKDLAVLVHDQGIVID 212

Query: 267 RIDYNIQNVATTVEDGLKQLQKAERTQKKGGMVMCATVLLIMCFVMLVLLVI 318
            I  NI   A        QL KA ++ K      C  VLLI   V+++ L++
Sbjct: 213 DIQSNIDTSAGATVQTKAQLAKANKSVKSKNK-WCWWVLLIFVAVLVIFLIV 263


>Medtr8g066340.1 | syntaxin of plants protein | HC |
           chr8:27589128-27583696 | 20130731
          Length = 274

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 19/198 (9%)

Query: 126 EITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRS-LATDLQNLSVELRKKQ-------ST 177
            I  L+K +  KL++ S      D N  K +  + LA D Q +  E +K Q       + 
Sbjct: 70  HIGQLVKDTSAKLKQASDIDHHADVNASKKIADAKLAKDFQAVLKEFQKAQRLSAERETA 129

Query: 178 YLKRLRQQKEGQDGVDLEINLNGGKSRYE-----DDDLDNMVFSEHQMAKLKKSEAFTVE 232
           Y   + Q          E+++   K+  +     +     ++F ++++A    +EA   E
Sbjct: 130 YTPFVPQAVLPSSYTASEMDIGTDKTPEQRALLVESRRQEVLFLDNEIAF---NEAIIEE 186

Query: 233 REKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERT 292
           RE+ IQ++ + + E+ +I KDL+VLV +QGT++D I  NI+N          QL KA +T
Sbjct: 187 REQGIQEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIENSHAATAQAKSQLAKASKT 246

Query: 293 QKKGGMVMCATVLLIMCF 310
           Q+    + C   LL++ F
Sbjct: 247 QRSNSSLAC---LLLVIF 261


>Medtr5g029650.1 | syntaxin of plants protein | HC |
           chr5:12458725-12462756 | 20130731
          Length = 268

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 31/203 (15%)

Query: 127 ITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRS-LATDLQNLSVELRKKQ-------STY 178
           I  L+K +  KL++ S      D N  K +  + LA D Q +  E +K Q       + Y
Sbjct: 65  IGQLVKDTSDKLKQASEIDHHADVNATKKIADAKLAKDFQAVLKEFQKAQRLAAERETAY 124

Query: 179 LKRLRQQKEGQDGVDLEINLNGGKS-----------RYEDDDLDNMVFSEHQMAKLKKSE 227
              +  + +       E+ ++  KS           R E   LDN         ++  +E
Sbjct: 125 TPFVPHEDQPSSYTGSEVGVSSDKSQERHAFLLESRRQEVISLDN---------EISFNE 175

Query: 228 AFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQ 287
           A   ERE+ IQ++ + + E+ +I KDL+VLV +QG ++D I  NI+N          QL 
Sbjct: 176 AIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIENSHEATAQAKSQLV 235

Query: 288 KAERTQKKGGMVMCATVLLIMCF 310
           +A +TQ+    + C   LL++ F
Sbjct: 236 QASKTQRSSSSLAC---LLMVIF 255