Miyakogusa Predicted Gene

Lj0g3v0060079.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0060079.1 Non Characterized Hit- tr|D8R358|D8R358_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,32.39,2e-16,seg,NULL;
coiled-coil,NULL,NODE_76121_length_1262_cov_12.358954.path1.1
         (312 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g026550.1 | hypothetical protein | HC | chr2:9606272-96031...   347   1e-95

>Medtr2g026550.1 | hypothetical protein | HC | chr2:9606272-9603155
           | 20130731
          Length = 387

 Score =  347 bits (889), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 196/323 (60%), Positives = 224/323 (69%), Gaps = 22/323 (6%)

Query: 1   MVKRFMEKKPKAAGT-----RLTIPCDVIAQDLKKDAKKVAGFSALQKKLFXXXXXXXXX 55
           MVK FM+ KPK+  T     +L IP DVIA+DLKKDAK+V GFS LQKKLF         
Sbjct: 76  MVKNFMQNKPKSVNTTTTTTKLFIPSDVIAKDLKKDAKRVTGFSTLQKKLFGKSGSSEKK 135

Query: 56  XXXXXXXXXXXXXGNTRTLAMVLRSERELLNINKEHEMEISQLKRMLEDKNKEVEKLKDL 115
                        GNTRTLAMVLRSERELL++NKE E EI +LK M+E+KNKEVEKLKDL
Sbjct: 136 EKVKALTEVK---GNTRTLAMVLRSERELLSVNKEQEEEILRLKLMIENKNKEVEKLKDL 192

Query: 116 CLKQREEIKSLKSAVLFPDVMNSQLQDLVEKQGSELKQAKQVIPALQQQVSSLTGQLQSL 175
           CL QREEIKSLKS++LFPDV NSQLQ+LVEKQG+ELK+AKQVIP+LQQQVSSLTGQLQSL
Sbjct: 193 CLNQREEIKSLKSSILFPDVTNSQLQELVEKQGTELKEAKQVIPSLQQQVSSLTGQLQSL 252

Query: 176 AEDLAEVKADKYSAKAGLQGYGSSPRT-PTHAREDASNSWDFSSEXXXXXXXXXXXNPCL 234
           AEDLAEVKADKYSAK G  GYGSSPRT P H REDASN W+FSSE           NPCL
Sbjct: 253 AEDLAEVKADKYSAKTGFLGYGSSPRTPPAHGREDASNFWEFSSEDMSDDLLLKDLNPCL 312

Query: 235 TPCNV-KSRSREFEGMCSGSLHEDSLSGDDAKICPVLDDFSSYDQXXXXXX----XXXXX 289
           TP    KS SR+       SL ++SLS DD K+ P LDDF+SY+Q               
Sbjct: 313 TPYKANKSSSRD-------SLLDESLSEDDLKVYPELDDFNSYNQKFSKSSDCYHQNTGK 365

Query: 290 XXXXXITSKAGRRSNERKSSLWR 312
                IT+KA RRS++ K++ WR
Sbjct: 366 IDKIGITTKASRRSDDMKTT-WR 387