Miyakogusa Predicted Gene

Lj0g3v0059399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0059399.1 Non Characterized Hit- tr|I1IS48|I1IS48_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,64.44,0.0000000003,seg,NULL; Oxidored-like,Oxidoreductase-like,
N-terminal; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,,CUFF.2623.1
         (107 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g076660.1 | amine-terminal oxidoreductase-like protein | H...    67   3e-12

>Medtr8g076660.1 | amine-terminal oxidoreductase-like protein | HC |
           chr8:32511798-32511562 | 20130731
          Length = 78

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 4/40 (10%)

Query: 72  GDCCGSGCVRCVWDIYYDDLEEYNKLYK----QDNPSTKP 107
           GDCCGSGCVRCVWD+YYD+LEEYNKLYK      NP +KP
Sbjct: 39  GDCCGSGCVRCVWDVYYDELEEYNKLYKDKDLDSNPKSKP 78