Miyakogusa Predicted Gene

Lj0g3v0059359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0059359.1 Non Characterized Hit- tr|I1MN94|I1MN94_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52310
PE,66.28,0,seg,NULL; put_zinc_LRP1: putative zinc finger domain, LRP1
t,Zinc finger, lateral root primordium ty,CUFF.2620.1
         (322 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g076620.1 | zinc finger, LRP1 type protein | HC | chr8:324...   336   2e-92
Medtr5g021130.1 | transcription factor, putative | HC | chr5:810...   241   7e-64
Medtr3g112510.1 | transcription factor, putative | LC | chr3:527...   181   8e-46
Medtr5g089750.1 | lateral root primordium (LRP)-like protein | H...   146   2e-35
Medtr4g071110.1 | zinc finger, LRP1 type protein | LC | chr4:267...   137   1e-32
Medtr3g014660.1 | LRP1 carboxy-terminal domain protein | HC | ch...   131   8e-31
Medtr8g039110.1 | LRP1 carboxy-terminal domain protein | HC | ch...   129   4e-30
Medtr1g023230.1 | zinc finger, LRP1 type protein | HC | chr1:741...   103   3e-22
Medtr0363s0040.1 | zinc finger, LRP1 type protein, putative | HC...    89   7e-18
Medtr0105s0070.1 | zinc finger, LRP1 type protein, putative | HC...    60   3e-09

>Medtr8g076620.1 | zinc finger, LRP1 type protein | HC |
           chr8:32482156-32484876 | 20130731
          Length = 331

 Score =  336 bits (861), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 189/340 (55%), Positives = 213/340 (62%), Gaps = 27/340 (7%)

Query: 1   MAGLFSLXXXXXXXXXXXXXXXXXIPPPETLFWYKPNDDVSSYRG-FELWNXXXXXXXXX 59
           MAGLFSL                 IPP ETLFWY  NDDVSSYRG  ELWN         
Sbjct: 1   MAGLFSLGGGGRGNQGEESQQQGHIPPQETLFWYNKNDDVSSYRGNLELWNQHQQHQQHQ 60

Query: 60  XXEVVGGAGLRPLY----------SAXXXXXXXXXXXXXXXXXXXAAAVGFVRASSSGEG 109
             + +  A  RP +                               AA    +R+SSS EG
Sbjct: 61  QQDDMHAA--RPFFPRDLYGPGVGLGVGPSRVSSDDHEHQSSSRSAAFTMAMRSSSSAEG 118

Query: 110 GGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAAKRRERQQQLNPGFHRT 169
             ISCQDCGNQAKKDCPHMRCRTCCKSRGF CQTHVKSTWVPA++RRERQQQL+    + 
Sbjct: 119 --ISCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPASRRRERQQQLSSSPLQR 176

Query: 170 DISKRPRD----IITSRNNQQLHSSSGLEHGNFPALVSSPAEFRCVRVSCVDDADDRYAY 225
           DISKRPRD    ++++RN    H  +GLE  NFPA+VSSPAEFRCVRVS +DDADDRYAY
Sbjct: 177 DISKRPRDGSNALVSTRN---FH--TGLEEANFPAVVSSPAEFRCVRVSSIDDADDRYAY 231

Query: 226 QTAVNIGGHVFKGILYDYGPDXXXXXXXXXXXXXXXXYMAGDTS-PAALAGAQPLNLTA- 283
           QTAVNIGGH+FKGILYD+GP+                YM G+TS    +  AQPLNL A 
Sbjct: 232 QTAVNIGGHLFKGILYDFGPESSTNNSNNNSNYNNSNYMIGETSGGGGVGVAQPLNLIAD 291

Query: 284 -AVTVVSSSGALVDPSSLYPSPVNAFMTGSGTQFFPRTRS 322
              TVV+SSGALVDPSSLY +P+NAFMT SGTQFFPR RS
Sbjct: 292 SDTTVVASSGALVDPSSLYSAPINAFMTASGTQFFPRPRS 331


>Medtr5g021130.1 | transcription factor, putative | HC |
           chr5:8100971-8103215 | 20130731
          Length = 323

 Score =  241 bits (615), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/348 (43%), Positives = 182/348 (52%), Gaps = 51/348 (14%)

Query: 1   MAGLFSLXXXXXXXXXXXXXXXXXIPPPETLFWYKPNDDV----SSYRGFELWNXXXXXX 56
           MAGLFSL                    P T FWY  NDD     +SYRGFE+WN      
Sbjct: 1   MAGLFSLGRTEEENQQNNN--------PTTEFWYNKNDDSVVSNNSYRGFEIWNQHQQQQ 52

Query: 57  XXXXXEVVGGAGLRPLYSAXXXXXXXXXXXXXXXXXXXAAAVGFVRASSSGEGGGISCQD 116
                +       + LYS+                   +    F+ + S    G ISCQD
Sbjct: 53  LFSLQQ----PQQQDLYSSGVVLGVGPTNRVCSSDENRSTV--FIGSGS----GSISCQD 102

Query: 117 CGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAA-----------------KRRERQ 159
           CGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAA                 K  ++ 
Sbjct: 103 CGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAARRRERQQQQQQQQLSAPKSFQQH 162

Query: 160 QQLNPGFHRTDISKRPRDIITSR----NNQQLHSSSGLEHGNFPALVSSPAEFRCVRVSC 215
             + P     D++     +  +R     +  L S+  L+  NFPA+V+SPAEFRCVRVS 
Sbjct: 163 GDIVPQNRHRDLNNNNSSLACTRLPTNRSLTLPSAGLLDEMNFPAVVNSPAEFRCVRVSS 222

Query: 216 VDDADDRYAYQTAVNIGGHVFKGILYDYGPDXXXXXXXXXXXXXXXXYMAGDTSPAALAG 275
           VD+ ++ YAY TAVNIGGHVF+GILYDYGPD                  A ++S  AL G
Sbjct: 223 VDENEEEYAYSTAVNIGGHVFRGILYDYGPDHGSNSYNMAAGN------ASNSSGTALEG 276

Query: 276 -AQPLNLTAAVTVVSSSGALVDPSSLYPSPVNAFMTGSGTQFFPRTRS 322
             +PLNL + V   S  G +VDPSSLYP+P+N FM  SGTQFFP  RS
Sbjct: 277 VVEPLNLISGVP-ASGVGEIVDPSSLYPAPLNTFMPSSGTQFFPHPRS 323


>Medtr3g112510.1 | transcription factor, putative | LC |
           chr3:52767953-52766535 | 20130731
          Length = 294

 Score =  181 bits (459), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 117/227 (51%), Positives = 136/227 (59%), Gaps = 39/227 (17%)

Query: 110 GGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAAKRRERQQQLN--PGFH 167
           GG++CQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWVPAAKRRERQQ L+  P   
Sbjct: 82  GGMNCQDCGNQAKKDCIHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQHLSALPFRR 141

Query: 168 RTDISKRPRDIITSRNNQQLH------SSSGLEHGNFPALVSSP-AEFRCVRVSCVDDAD 220
           R  +    R    ++    L        ++GLE G FP  VSSP   FRCVRVS +D  D
Sbjct: 142 RDHVDNYKRHTEINQGATSLPFPQPPIPTTGLELGQFPPEVSSPGVTFRCVRVSSLDGPD 201

Query: 221 -DRYAYQTAVNIGGHVFKGILYDYGPDXXXXXXXXXXXXXXXXYMAGDTSPAALAGA--- 276
            ++ AYQTAVNIGGHVFKGILYD GP                      TS A + G+   
Sbjct: 202 HEQCAYQTAVNIGGHVFKGILYDQGPPNLY------------------TSIAPIEGSSGG 243

Query: 277 ---QPLNL---TAAVTVVSSSGALVDPSSLYPSPVNAFMTGSGTQFF 317
              QP  L    A  T  ++SG   DP SLY +P+NAFM  +GTQFF
Sbjct: 244 GHHQPQQLDFMAATATTATTSGIHFDP-SLYSAPLNAFMA-AGTQFF 288


>Medtr5g089750.1 | lateral root primordium (LRP)-like protein | HC |
           chr5:39020566-39017917 | 20130731
          Length = 467

 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/154 (50%), Positives = 91/154 (59%), Gaps = 24/154 (15%)

Query: 114 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAAKRRERQQQL--------NPG 165
           CQDCGNQAKKDC + RCRTCCKSRGFDC THVKSTWVPAA+RRER               
Sbjct: 249 CQDCGNQAKKDCSNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERLSSTATTTVVAGGGS 308

Query: 166 FHRTDISKRPRDIIT---------------SRNNQQLHSSSGLEHGNFPALVSSPAEFRC 210
              T  +K+PR I +               S +    H  +G +  + P  V +PA F+C
Sbjct: 309 SGSTSGAKKPRLIASQTTSHTSTSNTTPPRSFDTTSSHQDAGFK-DSMPGQVRAPAVFKC 367

Query: 211 VRVSCVDDADDRYAYQTAVNIGGHVFKGILYDYG 244
           VRV+ VDD  D YAYQ  V IGGHVFKG LYD+G
Sbjct: 368 VRVTSVDDGKDEYAYQAVVKIGGHVFKGFLYDHG 401


>Medtr4g071110.1 | zinc finger, LRP1 type protein | LC |
           chr4:26795870-26794245 | 20130731
          Length = 264

 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/136 (47%), Positives = 87/136 (63%), Gaps = 10/136 (7%)

Query: 111 GISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAAKRRERQQQLNPGFHRTD 170
           G  CQDCGNQAKKDC + RCR+CCK++GF+C TH++STW+PA +RR          HR D
Sbjct: 14  GPKCQDCGNQAKKDCAYSRCRSCCKNKGFNCHTHIRSTWIPADRRR----------HRMD 63

Query: 171 ISKRPRDIITSRNNQQLHSSSGLEHGNFPALVSSPAEFRCVRVSCVDDADDRYAYQTAVN 230
                  +   + ++Q+++ S  +   FPA+ SS     CV+V  +D+  +  AYQT+V 
Sbjct: 64  HPSDQHHLHEHKRHKQINTISSSDEFKFPAVTSSMTTLTCVQVRSMDETVNETAYQTSVE 123

Query: 231 IGGHVFKGILYDYGPD 246
           IGGHVF GILYD GPD
Sbjct: 124 IGGHVFSGILYDQGPD 139


>Medtr3g014660.1 | LRP1 carboxy-terminal domain protein | HC |
           chr3:4203654-4198130 | 20130731
          Length = 329

 Score =  131 bits (330), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 88/156 (56%), Gaps = 24/156 (15%)

Query: 114 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAAKRRERQQQL---NPGFHRTD 170
           CQDCGN+AKKDC   RCRTCCK RG+DC TH+KSTW+P+ +RRER+ ++           
Sbjct: 134 CQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEMFAGGGDGEGCS 193

Query: 171 ISKRPRDIITSRNN--------------------QQLHSSSGLEHGNFPALVSSPAEFRC 210
             KR + ++ S  N                       H  +G + G  P  V++PA FRC
Sbjct: 194 GVKRQKGLLGSSQNAAATSHSSNSNGTTPKSFATSSCHQDAGFKEG-LPGHVNAPAVFRC 252

Query: 211 VRVSCVDDADDRYAYQTAVNIGGHVFKGILYDYGPD 246
            RV+ + + +D +AY   V+I GHVFKG LYD+G D
Sbjct: 253 HRVTAIGNGEDEFAYLATVHISGHVFKGFLYDHGVD 288


>Medtr8g039110.1 | LRP1 carboxy-terminal domain protein | HC |
           chr8:14512197-14513962 | 20130731
          Length = 327

 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 86/162 (53%), Gaps = 30/162 (18%)

Query: 114 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAAKRRERQQQLNPGFHR----T 169
           CQDCGN+AKKDC + RCRTCCK RGFDC THVKSTW+PA+ RR+R   +  G       +
Sbjct: 124 CQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMVVAEGGDSDGGAS 183

Query: 170 DISKRPRDIITSRNNQ-------------------------QLHSSSGLEHGNFPALVSS 204
             +KR + ++TS  N                            H   G +    P  V +
Sbjct: 184 SGTKRQKILMTSSQNNVAANSHSSSSNAATRTRSLSLDITSSCHQDPGFKQ-TLPRYVRA 242

Query: 205 PAEFRCVRVSCVDDADDRYAYQTAVNIGGHVFKGILYDYGPD 246
           PA F+C RVS + + +D  AY   VNI GHVFKG LYD G D
Sbjct: 243 PAVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGVD 284


>Medtr1g023230.1 | zinc finger, LRP1 type protein | HC |
           chr1:7419015-7417436 | 20130731
          Length = 252

 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 67/120 (55%), Gaps = 35/120 (29%)

Query: 112 ISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAAKRRE-------------- 157
           ++CQDCGNQAKKDCPH+RCRTCCKSRGF CQTHVKSTWVPAAKRRE              
Sbjct: 120 MNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLTSLQQQNQQ 179

Query: 158 -----------RQQQLNPGFHRTDISKRPRDIITSRNNQQLHSSSGLEHGNFPALVSSPA 206
                      R+ Q +P      ++  P  I T          +GLE GNFP  ++SP 
Sbjct: 180 QQQQFHSSRRHRENQNDPSGASGSLTCTPVPITT----------TGLELGNFPPELNSPG 229


>Medtr0363s0040.1 | zinc finger, LRP1 type protein, putative | HC |
           scaffold0363:17438-16319 | 20130731
          Length = 245

 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 4/75 (5%)

Query: 114 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAAKRRERQQQLNPGFHR----T 169
           CQDCGN+AKKDC + RCRTCCK RGFDC THVKSTW+PA+ RR+R   +  G       +
Sbjct: 124 CQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMVVAEGGDSDGGAS 183

Query: 170 DISKRPRDIITSRNN 184
             +KR + ++TS  N
Sbjct: 184 SGTKRQKILMTSSQN 198


>Medtr0105s0070.1 | zinc finger, LRP1 type protein, putative | HC |
           scaffold0105:24983-22116 | 20130731
          Length = 86

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/33 (63%), Positives = 29/33 (87%)

Query: 116 DCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKST 148
           DCGNQAKKDC + RCR+CCK++ F+C TH+K++
Sbjct: 44  DCGNQAKKDCAYSRCRSCCKNKDFNCHTHIKTS 76