Miyakogusa Predicted Gene

Lj0g3v0059259.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0059259.1 Non Characterized Hit- tr|D7SP48|D7SP48_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.07,3e-17,coiled-coil,NULL,CUFF.2628.1
         (130 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g076590.1 | histidine kinase-, DNA gyrase B | HC | chr8:32...   123   5e-29

>Medtr8g076590.1 | histidine kinase-, DNA gyrase B | HC |
           chr8:32453780-32471662 | 20130731
          Length = 512

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 97/157 (61%), Gaps = 30/157 (19%)

Query: 1   MVNDYWKGHCHLVGYQPLNFKSQNVQKETQIRQSAGRSTNTQNV-------------HQD 47
           +V DYWK HCHLVG+QP NF+SQ  QKE +IRQSAG  TN++N              HQ 
Sbjct: 357 IVYDYWKDHCHLVGFQPTNFRSQIGQKEARIRQSAGHLTNSRNEILADPHDICVAAEHQQ 416

Query: 48  DLYIDQTIAG---------------ATSTGTPGPVAVDKNKICEENIQLFMKCEEFRKKE 92
            + + Q   G                TS+G    V++D   IC+ENI+LF +CEE+R+KE
Sbjct: 417 IVNLHQPNEGLRATGKQCLTHEQGQGTSSGASPSVSIDA--ICDENIKLFTRCEEYRQKE 474

Query: 93  TELKQTVENLEEDLKDLQRKCRQLSAFLVAKKKQKSS 129
           TEL++TV++LEE+LK+ Q KC  +S+ + AK+KQ ++
Sbjct: 475 TELRKTVKHLEEELKEYQSKCAFVSSQIEAKRKQNNA 511