Miyakogusa Predicted Gene

Lj0g3v0058659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0058659.1 Non Characterized Hit- tr|I1KY01|I1KY01_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,51.49,1e-18,
,CUFF.2577.1
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g046760.1 | eukaryotic cytochrome b561 protein | HC | chr3...   118   1e-27
Medtr4g096780.2 | eukaryotic cytochrome b561 protein | HC | chr4...    58   2e-09
Medtr4g096780.1 | eukaryotic cytochrome b561 protein | HC | chr4...    58   2e-09

>Medtr3g046760.1 | eukaryotic cytochrome b561 protein | HC |
           chr3:15506588-15509918 | 20130731
          Length = 250

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 54/90 (60%), Positives = 71/90 (78%)

Query: 7   LFQASLVLTMFLIVSASQQHKKAKGIHSRNKDHHTKINPRLHFEITLHGFLLWASLAFLM 66
           LFQA LVL +F +VS+SQ+H++  G +S N D+H K++PRL FEITLHGFLLWAS+ FLM
Sbjct: 16  LFQACLVLFLFPLVSSSQEHQEILGANSTNNDNHIKLSPRLQFEITLHGFLLWASMGFLM 75

Query: 67  PVGVLVIRLSSADGNRRRLRIIFYAHAVLQ 96
           P+G+L IRLS+ + N R LRI+FY H + Q
Sbjct: 76  PIGILAIRLSNREENPRWLRILFYVHTIFQ 105


>Medtr4g096780.2 | eukaryotic cytochrome b561 protein | HC |
           chr4:38511793-38508259 | 20130731
          Length = 268

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 12  LVLTMFLIVSASQQHKKAKGIHSRNKDHHT-----KINPRLHFEITLHGFLLWASLAFLM 66
           ++++ +  V    Q    K ++  N   +T     K+N +   +I LHG LLW S+ FLM
Sbjct: 11  VIVSFYAFVIPFTQCTTLKEVNQFNSQRNTNSKVHKVNHQKASDIALHGLLLWGSVGFLM 70

Query: 67  PVGVLVIRLSS-ADGNRRRLRIIFYAHAVLQ 96
           P+G+L IR S+ A+   RR RI+FY H   Q
Sbjct: 71  PLGILTIRGSNKAEPGSRRSRILFYFHVAFQ 101


>Medtr4g096780.1 | eukaryotic cytochrome b561 protein | HC |
           chr4:38511677-38507721 | 20130731
          Length = 344

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 12  LVLTMFLIVSASQQHKKAKGIHSRNKDHHT-----KINPRLHFEITLHGFLLWASLAFLM 66
           ++++ +  V    Q    K ++  N   +T     K+N +   +I LHG LLW S+ FLM
Sbjct: 11  VIVSFYAFVIPFTQCTTLKEVNQFNSQRNTNSKVHKVNHQKASDIALHGLLLWGSVGFLM 70

Query: 67  PVGVLVIRLSS-ADGNRRRLRIIFYAHAVLQ 96
           P+G+L IR S+ A+   RR RI+FY H   Q
Sbjct: 71  PLGILTIRGSNKAEPGSRRSRILFYFHVAFQ 101