Miyakogusa Predicted Gene

Lj0g3v0058349.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0058349.1 tr|Q8LKL1|Q8LKL1_9MARC Tubulin gamma chain
OS=Conocephalum japonicum GN=gtb1 PE=3
SV=1,100,0.000000000000007,Tubulin_C,Tubulin/FtsZ, 2-layer sandwich
domain; no description,Tubulin/FtsZ, 2-layer sandwich
domai,NODE_65609_length_100_cov_42.970001.path1.1
         (42 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g117050.1 | tubulin | HC | chr7:48332494-48327570 | 20130731     86   6e-18

>Medtr7g117050.1 | tubulin | HC | chr7:48332494-48327570 | 20130731
          Length = 474

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/42 (100%), Positives = 42/42 (100%)

Query: 1   MRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQV 42
           MRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQV
Sbjct: 294 MRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQV 335