Miyakogusa Predicted Gene
- Lj0g3v0058059.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0058059.2 Non Characterized Hit- tr|I1JJ07|I1JJ07_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,57.21,0,Helicase associated domain (HA2) Add an
ann,Helicase-associated domain; HA2,Helicase-associated
dom,CUFF.2556.2
(413 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC | ch... 448 e-126
Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC | ch... 448 e-126
Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein ... 139 4e-33
Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein ... 139 4e-33
Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein ... 139 4e-33
Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein ... 139 4e-33
Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein ... 139 4e-33
Medtr1g056490.1 | ATP-dependent RNA helicase | HC | chr1:2472920... 139 5e-33
Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein ... 134 1e-31
Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein ... 134 2e-31
Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein ... 134 2e-31
Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC... 132 5e-31
Medtr4g134790.1 | ATP-dependent RNA helicase | HC | chr4:5652988... 129 5e-30
Medtr4g134790.2 | ATP-dependent RNA helicase | HC | chr4:5652988... 129 6e-30
Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 72 7e-13
Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 72 7e-13
Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:51... 70 5e-12
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 70 5e-12
Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 62 1e-09
Medtr3g055020.1 | helicase associated domain protein | HC | chr3... 61 2e-09
Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 60 3e-09
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 60 4e-09
Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 59 7e-09
Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA he... 59 8e-09
Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 56 8e-08
Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 53 5e-07
Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 53 6e-07
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 53 6e-07
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 53 6e-07
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 51 3e-06
>Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1190
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/428 (55%), Positives = 298/428 (69%), Gaps = 37/428 (8%)
Query: 1 MPIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKK 60
MPIE+LCLQVK+LDPS +IE FL++TLDPP +SI NA+ VL+ IG LS E LT+LG+K
Sbjct: 700 MPIEELCLQVKMLDPSCKIEVFLAKTLDPPVSESIRNAIVVLRDIGALSTDETLTDLGEK 759
Query: 61 LGSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELAS 120
LGSLPVHPL RML F+ILMNCLDPALTL CAS + DPFT P+L ++KKRAA A+ ELAS
Sbjct: 760 LGSLPVHPLISRMLFFAILMNCLDPALTLACASDYKDPFTLPMLPEDKKRAADAKTELAS 819
Query: 121 LYGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGL 180
LYGGC D ++A FECW NS +MGLE RFCSQYFVS M MLS MR +L EL + G
Sbjct: 820 LYGGCGDQFAVLAAFECWNNSKKMGLEARFCSQYFVSGGAMKMLSGMRKQLQKELIRIGF 879
Query: 181 IHDDVSSYCLNSHDPGILNAVLVAGMYPVLGK-SLPNESGKRVFVKTETCNEVGLTSHSV 239
I DVSSY +N+HDPG+L+AVLV+GMYP++G+ PN+ KR ++T + ++V L + S
Sbjct: 880 ILSDVSSYSMNAHDPGVLHAVLVSGMYPMVGRLCFPNKGAKRAIIETASGDKVRLHNRST 939
Query: 240 NFKLFSQKNFGCSLLAYDEIARDDWGMSISNCSVVGPLPLLLLCKEIAV----------- 288
NFKL ++N G +L+ +DE+ R D G++I NCS+VGPLPLLLL EIAV
Sbjct: 940 NFKLSFKRNLGHTLVVFDEVTRGDMGVNIKNCSLVGPLPLLLLSTEIAVAPGEQNDHKKE 999
Query: 289 -------------TSIKDSKEGDKSS------------DNIVRVIVDRWLDFRSKALDIS 323
I D + D S D++VR+IVDRWL F S A+D+S
Sbjct: 1000 AEDDDDDEGSGDEAGIDDGMDLDTKSIGNNEDKFMSSPDDMVRIIVDRWLYFGSTAIDVS 1059
Query: 324 HMNYLRNQLSAAILFKVTHSKFVLPPFLGAAMNALACILSCDGLSGIPQTSDGADSLITT 383
+ LR +LSAAIL+KVT+ LPP LGA+++A+ACILSCDG SG+ +DG D+L T
Sbjct: 1060 LLYCLRERLSAAILYKVTYPSNPLPPILGASIHAIACILSCDGCSGMSVATDGVDNLTTM 1119
Query: 384 VNATNLGK 391
VNATNLGK
Sbjct: 1120 VNATNLGK 1127
>Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1077
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/428 (55%), Positives = 298/428 (69%), Gaps = 37/428 (8%)
Query: 1 MPIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKK 60
MPIE+LCLQVK+LDPS +IE FL++TLDPP +SI NA+ VL+ IG LS E LT+LG+K
Sbjct: 587 MPIEELCLQVKMLDPSCKIEVFLAKTLDPPVSESIRNAIVVLRDIGALSTDETLTDLGEK 646
Query: 61 LGSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELAS 120
LGSLPVHPL RML F+ILMNCLDPALTL CAS + DPFT P+L ++KKRAA A+ ELAS
Sbjct: 647 LGSLPVHPLISRMLFFAILMNCLDPALTLACASDYKDPFTLPMLPEDKKRAADAKTELAS 706
Query: 121 LYGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGL 180
LYGGC D ++A FECW NS +MGLE RFCSQYFVS M MLS MR +L EL + G
Sbjct: 707 LYGGCGDQFAVLAAFECWNNSKKMGLEARFCSQYFVSGGAMKMLSGMRKQLQKELIRIGF 766
Query: 181 IHDDVSSYCLNSHDPGILNAVLVAGMYPVLGK-SLPNESGKRVFVKTETCNEVGLTSHSV 239
I DVSSY +N+HDPG+L+AVLV+GMYP++G+ PN+ KR ++T + ++V L + S
Sbjct: 767 ILSDVSSYSMNAHDPGVLHAVLVSGMYPMVGRLCFPNKGAKRAIIETASGDKVRLHNRST 826
Query: 240 NFKLFSQKNFGCSLLAYDEIARDDWGMSISNCSVVGPLPLLLLCKEIAV----------- 288
NFKL ++N G +L+ +DE+ R D G++I NCS+VGPLPLLLL EIAV
Sbjct: 827 NFKLSFKRNLGHTLVVFDEVTRGDMGVNIKNCSLVGPLPLLLLSTEIAVAPGEQNDHKKE 886
Query: 289 -------------TSIKDSKEGDKSS------------DNIVRVIVDRWLDFRSKALDIS 323
I D + D S D++VR+IVDRWL F S A+D+S
Sbjct: 887 AEDDDDDEGSGDEAGIDDGMDLDTKSIGNNEDKFMSSPDDMVRIIVDRWLYFGSTAIDVS 946
Query: 324 HMNYLRNQLSAAILFKVTHSKFVLPPFLGAAMNALACILSCDGLSGIPQTSDGADSLITT 383
+ LR +LSAAIL+KVT+ LPP LGA+++A+ACILSCDG SG+ +DG D+L T
Sbjct: 947 LLYCLRERLSAAILYKVTYPSNPLPPILGASIHAIACILSCDGCSGMSVATDGVDNLTTM 1006
Query: 384 VNATNLGK 391
VNATNLGK
Sbjct: 1007 VNATNLGK 1014
>Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 134/239 (56%), Gaps = 7/239 (2%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P++ LCLQ+K L S I FLS L PP+ S++NAV L+ IG L E+E LT LG KL
Sbjct: 701 PLQSLCLQIKSLQLGS-ISEFLSSALQPPEPLSVQNAVDYLKIIGALDENENLTVLGCKL 759
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
LPV P G+MLI + NCLDP LT+ DPF P D+K A +A+ ++A+
Sbjct: 760 SMLPVEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFVVPA--DKKDLAESAKAQIAAR 817
Query: 122 YGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLI 181
G SDHL ++ ++ W+++ FC + F+S T+ + S+R + L GL+
Sbjct: 818 --GYSDHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLV 875
Query: 182 HDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN 240
++ + S++ +L AV+ AG++P + + E K + +KT +V L ++SVN
Sbjct: 876 GNNSETNNKWSNEEHLLRAVICAGLFPGISSVVNKE--KSISLKTMEDGQVLLYANSVN 932
>Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 134/239 (56%), Gaps = 7/239 (2%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P++ LCLQ+K L S I FLS L PP+ S++NAV L+ IG L E+E LT LG KL
Sbjct: 701 PLQSLCLQIKSLQLGS-ISEFLSSALQPPEPLSVQNAVDYLKIIGALDENENLTVLGCKL 759
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
LPV P G+MLI + NCLDP LT+ DPF P D+K A +A+ ++A+
Sbjct: 760 SMLPVEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFVVPA--DKKDLAESAKAQIAAR 817
Query: 122 YGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLI 181
G SDHL ++ ++ W+++ FC + F+S T+ + S+R + L GL+
Sbjct: 818 --GYSDHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLV 875
Query: 182 HDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN 240
++ + S++ +L AV+ AG++P + + E K + +KT +V L ++SVN
Sbjct: 876 GNNSETNNKWSNEEHLLRAVICAGLFPGISSVVNKE--KSISLKTMEDGQVLLYANSVN 932
>Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 134/239 (56%), Gaps = 7/239 (2%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P++ LCLQ+K L S I FLS L PP+ S++NAV L+ IG L E+E LT LG KL
Sbjct: 701 PLQSLCLQIKSLQLGS-ISEFLSSALQPPEPLSVQNAVDYLKIIGALDENENLTVLGCKL 759
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
LPV P G+MLI + NCLDP LT+ DPF P D+K A +A+ ++A+
Sbjct: 760 SMLPVEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFVVPA--DKKDLAESAKAQIAAR 817
Query: 122 YGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLI 181
G SDHL ++ ++ W+++ FC + F+S T+ + S+R + L GL+
Sbjct: 818 --GYSDHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLV 875
Query: 182 HDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN 240
++ + S++ +L AV+ AG++P + + E K + +KT +V L ++SVN
Sbjct: 876 GNNSETNNKWSNEEHLLRAVICAGLFPGISSVVNKE--KSISLKTMEDGQVLLYANSVN 932
>Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 134/239 (56%), Gaps = 7/239 (2%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P++ LCLQ+K L S I FLS L PP+ S++NAV L+ IG L E+E LT LG KL
Sbjct: 701 PLQSLCLQIKSLQLGS-ISEFLSSALQPPEPLSVQNAVDYLKIIGALDENENLTVLGCKL 759
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
LPV P G+MLI + NCLDP LT+ DPF P D+K A +A+ ++A+
Sbjct: 760 SMLPVEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFVVPA--DKKDLAESAKAQIAAR 817
Query: 122 YGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLI 181
G SDHL ++ ++ W+++ FC + F+S T+ + S+R + L GL+
Sbjct: 818 --GYSDHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLV 875
Query: 182 HDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN 240
++ + S++ +L AV+ AG++P + + E K + +KT +V L ++SVN
Sbjct: 876 GNNSETNNKWSNEEHLLRAVICAGLFPGISSVVNKE--KSISLKTMEDGQVLLYANSVN 932
>Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 134/239 (56%), Gaps = 7/239 (2%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P++ LCLQ+K L S I FLS L PP+ S++NAV L+ IG L E+E LT LG KL
Sbjct: 701 PLQSLCLQIKSLQLGS-ISEFLSSALQPPEPLSVQNAVDYLKIIGALDENENLTVLGCKL 759
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
LPV P G+MLI + NCLDP LT+ DPF P D+K A +A+ ++A+
Sbjct: 760 SMLPVEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFVVPA--DKKDLAESAKAQIAAR 817
Query: 122 YGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLI 181
G SDHL ++ ++ W+++ FC + F+S T+ + S+R + L GL+
Sbjct: 818 --GYSDHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLV 875
Query: 182 HDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN 240
++ + S++ +L AV+ AG++P + + E K + +KT +V L ++SVN
Sbjct: 876 GNNSETNNKWSNEEHLLRAVICAGLFPGISSVVNKE--KSISLKTMEDGQVLLYANSVN 932
>Medtr1g056490.1 | ATP-dependent RNA helicase | HC |
chr1:24729204-24739293 | 20130731
Length = 999
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 138/262 (52%), Gaps = 18/262 (6%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P+++LCL +K L + FL + L PPD +++NA+ +L+ IG L E+LT LG+ L
Sbjct: 653 PLQELCLHIKSLQLGT-AAPFLGKALQPPDSLAVQNAIELLKTIGALDNKEELTPLGRHL 711
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
++P+ P G+ML+ + CL PALT+ + + +PF P+ + KK A A+
Sbjct: 712 CTVPLDPNIGKMLLMGSIFQCLSPALTIAASLAYRNPFVLPI--NRKKEADEAK-----R 764
Query: 122 YGGC---SDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQN 178
Y C SDHL ++ FE W+++ G E+ FC + F+S +T+ ++ MRT+ L
Sbjct: 765 YFACDSRSDHLALVEAFEEWKDAKSRGDEKNFCWENFLSPATLRLIDDMRTQFLNLLSDI 824
Query: 179 GLIHDD--VSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTS 236
G + V +Y SHD ++ A+L AG+YP + + G R T+ +V +
Sbjct: 825 GFVDKSKGVQAYNQQSHDLEMVCAILCAGLYPNVVQC--KRRGHRTAFYTKEAGKVDIHP 882
Query: 237 HSVNFKLFSQKNFGCSLLAYDE 258
SVN + S F L Y E
Sbjct: 883 SSVNAGVHS---FPLPYLVYSE 901
>Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:16995201-16976389 | 20130731
Length = 1148
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 126/239 (52%), Gaps = 7/239 (2%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P+ LCLQ+K L S I FLS L P ++++NA+ L IG L E E LT LGK L
Sbjct: 676 PLNSLCLQIKSLQVES-IGEFLSSALQAPKPRTVQNAIDFLTMIGALDEKENLTNLGKFL 734
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
LPV P G+MLI + C DP LT+ DPF P D+K A A+ ++
Sbjct: 735 SILPVDPKLGKMLIMGAIFRCFDPVLTIVAGLSVRDPFLLP--QDKKDLAGTAKSRFSA- 791
Query: 122 YGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLI 181
SDH+ ++ +E W+++ R G +C + F+S T+ + S+R + + L + GL+
Sbjct: 792 -KDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFSFILKEAGLV 850
Query: 182 HDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN 240
D S SH+ ++ AV+ +G++P + + E+ + KT +V L ++SVN
Sbjct: 851 DTDASINNKLSHNQSLVRAVICSGLFPGIASVVHRETS--MSFKTMDDGQVLLYANSVN 907
>Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360105 | 20130731
Length = 1248
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 131/241 (54%), Gaps = 8/241 (3%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P++ LCLQ+K L S I FLS+ L P++ +++NAV L+ IG L ESE LT LG L
Sbjct: 755 PLQSLCLQIKSLRLGS-ISDFLSRALQSPEILAVQNAVEYLKIIGALDESENLTTLGSYL 813
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
LP+ P G+MLI + NCLDP LT+ DPF P+ D+K A AA+ +
Sbjct: 814 TMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLSPL--DKKDLAEAAKSQYT-- 869
Query: 122 YGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLI 181
G SDHL ++ + W+ + + +C + F+S +M + ++R E L GL+
Sbjct: 870 -GAYSDHLALVRAYAGWKEAEIDLVGYEYCWKNFLSFQSMKAIDALRREFIGLLTDIGLV 928
Query: 182 HDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVNF 241
+ +S S+D ++ AV+ G+YP + + NE K +KT +V L S+SVN
Sbjct: 929 DSNTTSCDTWSYDVNLIRAVICYGLYPGICSVVHNE--KSFALKTMEDGQVLLYSNSVNA 986
Query: 242 K 242
+
Sbjct: 987 R 987
>Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360401 | 20130731
Length = 1222
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 131/241 (54%), Gaps = 8/241 (3%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P++ LCLQ+K L S I FLS+ L P++ +++NAV L+ IG L ESE LT LG L
Sbjct: 755 PLQSLCLQIKSLRLGS-ISDFLSRALQSPEILAVQNAVEYLKIIGALDESENLTTLGSYL 813
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
LP+ P G+MLI + NCLDP LT+ DPF P+ D+K A AA+ +
Sbjct: 814 TMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLSPL--DKKDLAEAAKSQYT-- 869
Query: 122 YGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLI 181
G SDHL ++ + W+ + + +C + F+S +M + ++R E L GL+
Sbjct: 870 -GAYSDHLALVRAYAGWKEAEIDLVGYEYCWKNFLSFQSMKAIDALRREFIGLLTDIGLV 928
Query: 182 HDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVNF 241
+ +S S+D ++ AV+ G+YP + + NE K +KT +V L S+SVN
Sbjct: 929 DSNTTSCDTWSYDVNLIRAVICYGLYPGICSVVHNE--KSFALKTMEDGQVLLYSNSVNA 986
Query: 242 K 242
+
Sbjct: 987 R 987
>Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC |
chr8:17594404-17602720 | 20130731
Length = 630
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 129/241 (53%), Gaps = 12/241 (4%)
Query: 2 PIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKL 61
P+ LCLQ+K L S I FLS L+ PD ++++NA+ L IG L E E LT LGK L
Sbjct: 263 PLNSLCLQIKSLQVES-IGKFLSSALEAPDPRAVQNAIEFLTTIGALDEDENLTNLGKVL 321
Query: 62 GSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASL 121
LPV P G+MLI + C DP LT+ DPF E KR A +RF A+
Sbjct: 322 SILPVDPKLGKMLIMGAIFRCFDPVLTIVSVLSVRDPFLMLQDKSELKR-AKSRFS-AND 379
Query: 122 YGGCSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLI 181
Y SDH+ + +E W+++ R + +C + F+S T+H + S+R +L++ L + GL+
Sbjct: 380 Y---SDHMVFVRAYEGWKDAKRERSDYNYCWRNFLSSQTLHEIHSIRKQLSSILKETGLL 436
Query: 182 HDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVNF 241
D S S D ++ AV+ +G++P + S+ ES +KT V L SVN
Sbjct: 437 DTDASINNNLSIDQSLVRAVICSGLFPCIA-SVNQES-----IKTMDDGYVLLAEISVNS 490
Query: 242 K 242
K
Sbjct: 491 K 491
>Medtr4g134790.1 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1452
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 160/366 (43%), Gaps = 66/366 (18%)
Query: 1 MPIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKK 60
MP+ +LCLQ+KLL I+ FLS L+PP +++I++A+++L +G L E+LT LG
Sbjct: 1056 MPLVELCLQIKLLS-LGYIKPFLSTALEPPKIEAIDSAMSLLYEVGALEGDEELTPLGHH 1114
Query: 61 LGSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFEL-- 118
L LPV L G+M+++ + CL P L++ + PF +P DE++ A+ L
Sbjct: 1115 LAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFVYP--KDERQNVERAKLTLLN 1172
Query: 119 --------ASLYGGCSDHLPIIAVFECWQ---NSTRMGLEERFCSQYFVSQSTMHMLSSM 167
+ SDHL +I ++ W+ N ++FC+ YF+S S M M+ M
Sbjct: 1173 DKQDGPGEGNDIDRQSDHLLMIIAYKKWETILNEKGPKAAQQFCNSYFLSSSVMFMIREM 1232
Query: 168 RTELATELFQNGLI--------------------HDDVSSYCLNSHDPGILNAVLVAGMY 207
R + T L GLI D + + +H P IL A+L AG+Y
Sbjct: 1233 RIQFGTLLADIGLIILPKLNQMDGRKIGSLDRWLSDSSQPFNMYAHHPSILKAILCAGLY 1292
Query: 208 PVLG--------------KSLPNESGKRVFVKTETCNEVGLTSHSVNFKLFSQKNFGCSL 253
P + K P+ + V + EV + S+N S K F
Sbjct: 1293 PNVAAGEQGIVSAALTSLKQSPSTANSSHRVWFDGRREVHVHPSSIN---SSTKAFKYPF 1349
Query: 254 LAYDEIARDDWGMSISNCSVVGPLPLLLLCKEIAVTSIKDSKEGDKSSDNIVRVIVDRWL 313
L + E + + + + SV+ P +LL I V VI+D WL
Sbjct: 1350 LVFLEKVETN-KIFLRDTSVISPYSILLFGGSINV------------QHQTGLVIIDGWL 1396
Query: 314 DFRSKA 319
+ A
Sbjct: 1397 KLNAPA 1402
>Medtr4g134790.2 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1449
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 160/366 (43%), Gaps = 66/366 (18%)
Query: 1 MPIEDLCLQVKLLDPSSRIEAFLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKK 60
MP+ +LCLQ+KLL I+ FLS L+PP +++I++A+++L +G L E+LT LG
Sbjct: 1053 MPLVELCLQIKLLS-LGYIKPFLSTALEPPKIEAIDSAMSLLYEVGALEGDEELTPLGHH 1111
Query: 61 LGSLPVHPLAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFEL-- 118
L LPV L G+M+++ + CL P L++ + PF +P DE++ A+ L
Sbjct: 1112 LAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFVYP--KDERQNVERAKLTLLN 1169
Query: 119 --------ASLYGGCSDHLPIIAVFECWQ---NSTRMGLEERFCSQYFVSQSTMHMLSSM 167
+ SDHL +I ++ W+ N ++FC+ YF+S S M M+ M
Sbjct: 1170 DKQDGPGEGNDIDRQSDHLLMIIAYKKWETILNEKGPKAAQQFCNSYFLSSSVMFMIREM 1229
Query: 168 RTELATELFQNGLI--------------------HDDVSSYCLNSHDPGILNAVLVAGMY 207
R + T L GLI D + + +H P IL A+L AG+Y
Sbjct: 1230 RIQFGTLLADIGLIILPKLNQMDGRKIGSLDRWLSDSSQPFNMYAHHPSILKAILCAGLY 1289
Query: 208 PVLG--------------KSLPNESGKRVFVKTETCNEVGLTSHSVNFKLFSQKNFGCSL 253
P + K P+ + V + EV + S+N S K F
Sbjct: 1290 PNVAAGEQGIVSAALTSLKQSPSTANSSHRVWFDGRREVHVHPSSIN---SSTKAFKYPF 1346
Query: 254 LAYDEIARDDWGMSISNCSVVGPLPLLLLCKEIAVTSIKDSKEGDKSSDNIVRVIVDRWL 313
L + E + + + + SV+ P +LL I V VI+D WL
Sbjct: 1347 LVFLEKVETN-KIFLRDTSVISPYSILLFGGSINV------------QHQTGLVIIDGWL 1393
Query: 314 DFRSKA 319
+ A
Sbjct: 1394 KLNAPA 1399
>Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +++ +A+ L +G L E LT+LG+K+ P+ P +ML+ S+ + C D
Sbjct: 951 MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1010
Query: 87 LT----LECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNST 142
LT ++ ++F P D+K+ ARF + DHL ++AV+E W+N
Sbjct: 1011 LTIIAMIQTGNIFYRPREKQAQADQKR----ARF-----FQPEGDHLTLLAVYESWKNKN 1061
Query: 143 RMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNSHDPGILNAVL 202
G +C + FV ++ +R +L T + + L DV S N + +
Sbjct: 1062 FSGP---WCFENFVQSRSLRRAQDVRKQLLTIMDKYKL---DVVSAGKNFTK---IRKAI 1112
Query: 203 VAGMYPVLGKSLPNESGKRVFVKTE 227
AG + + P E G R V+ +
Sbjct: 1113 TAGFFFHAARKDPQE-GYRTLVENQ 1136
>Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +++ +A+ L +G L E LT+LG+K+ P+ P +ML+ S+ + C D
Sbjct: 951 MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1010
Query: 87 LT----LECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNST 142
LT ++ ++F P D+K+ ARF + DHL ++AV+E W+N
Sbjct: 1011 LTIIAMIQTGNIFYRPREKQAQADQKR----ARF-----FQPEGDHLTLLAVYESWKNKN 1061
Query: 143 RMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNSHDPGILNAVL 202
G +C + FV ++ +R +L T + + L DV S N + +
Sbjct: 1062 FSGP---WCFENFVQSRSLRRAQDVRKQLLTIMDKYKL---DVVSAGKNFTK---IRKAI 1112
Query: 203 VAGMYPVLGKSLPNESGKRVFVKTE 227
AG + + P E G R V+ +
Sbjct: 1113 TAGFFFHAARKDPQE-GYRTLVENQ 1136
>Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:51667204-51673502 | 20130731
Length = 1154
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
LDPP +++ +A+ L +G L + LT+LG+K+ P+ P +ML+ S+ + C D
Sbjct: 882 LDPPSPQALISAMEQLYSLGALDDEGLLTKLGRKMAEFPMDPPLSKMLLASVDLGCSDEI 941
Query: 87 LT----LECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNST 142
LT ++ ++F P D+KK ARF + DHL ++AV+E W++
Sbjct: 942 LTIIAMIQTGNIFYRPREKQAQADQKK----ARF-----FQAEGDHLTLLAVYESWKSKN 992
Query: 143 RMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNSHDPGILNAVL 202
G +C + FV ++ +R +L + + + L D+ S N + +
Sbjct: 993 FSGP---WCFENFVQSRSLRRAQDVRKQLLSIMDKYKL---DIVSAGKNFSK---IRKAI 1043
Query: 203 VAGMYPVLGKSLPNESGKRVFVKTE 227
AG + + P E G R V+ +
Sbjct: 1044 TAGFFFHAARKDPQE-GYRTLVENQ 1067
>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 904
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 22 FLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMN 81
F + +DPP L +++NAV +L +G L+ KLT++G+++ P+ P+ +M+I S
Sbjct: 633 FQFEFMDPPPLDALKNAVELLCNLGALNGHVKLTKVGRRMAEFPLDPMLSKMIIASEKYK 692
Query: 82 CLDPALTLECA-SVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQN 140
C D +++ SV F P ++K A AR + G DH+ + V+ W+
Sbjct: 693 CSDEIISIAAMLSVGGSIFYSP--KNKKVHADNARMNFHT--GNVGDHIAHLNVYNSWKE 748
Query: 141 STRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNSHDPGILNA 200
S ++C + ++ +M +R +L GL+ NS+D +
Sbjct: 749 SN---YSRQWCYENYIQVRSMKRAKDIRDQLV------GLLERIEIELTSNSNDLDAIKK 799
Query: 201 VLVAGMYPVLGK 212
+ +G +P K
Sbjct: 800 SITSGFFPNTAK 811
>Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | chr3:21592985-21589785 | 20130731
Length = 1066
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 10 VKLLDPSSRIEAFLS-QTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHP 68
V LL S ++E L +DPP +I N++ L +G L+ + +LTELG K+ P+ P
Sbjct: 735 VVLLLKSLKVENLLDFDFIDPPPQDNILNSMYQLWMLGALNNAGRLTELGWKMVEFPLDP 794
Query: 69 LAGRMLIFSILMNCLDPALT----LECASVFDDPFTHPVLHDEKKRAAAARFELASLYGG 124
+ML+ CL+ LT L SVF P K RAA + +
Sbjct: 795 PLAKMLLMGEQFGCLEEVLTIVSMLSVPSVFFRP---------KDRAAESDAARERFFVP 845
Query: 125 CSDHLPIIAVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTEL 171
SDHL + V++ W+ G +C+ +F+ + +R++L
Sbjct: 846 ESDHLTLYNVYQQWKQHDYRG---DWCNDHFLHVKGLRKAREVRSQL 889
>Medtr3g055020.1 | helicase associated domain protein | HC |
chr3:21626884-21623913 | 20130731
Length = 445
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 10 VKLLDPSSRIEAFLS-QTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHP 68
V LL S ++E L +DPP +I N++ L +G L+ + +LTELG K+ P+ P
Sbjct: 112 VVLLLKSLKVENLLDFDFIDPPPQDNILNSMYQLWMLGALNNAGRLTELGWKMVEFPLDP 171
Query: 69 LAGRMLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDH 128
+ML+ CL+ LT+ F P E+ AA RF + SDH
Sbjct: 172 PLAKMLLMGEHFGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFFVPE-----SDH 226
Query: 129 LPIIAVFECWQNSTRMGLEERFCSQYFVS 157
L + V++ W+ G +C+ +F+
Sbjct: 227 LTLYNVYQQWKQHYYRG---DWCNDHFLQ 252
>Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr4:33389635-33387508 | 20130731
Length = 683
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +++ A+ VL +G + + LT+LG+ + P+ P +MLI S NC +
Sbjct: 413 MDPPAPETLMRALEVLNYLGAIDDEGNLTKLGEIMSEFPLDPQMSKMLIVSPEFNCSNEI 472
Query: 87 LTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNSTRMGL 146
L++ + F P E A ARF A + G DHL ++ V+ ++ +
Sbjct: 473 LSISAMVAVPNCFIRPRDAQEAADEAKARF--AHIDG---DHLTLLNVYHAYKQNNE--- 524
Query: 147 EERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNSHDPGI-LNAVLVAG 205
+ +C + FV+ + ++R +L + + L + S NS D + + ++AG
Sbjct: 525 DPSWCYENFVNHRALKSADNVRQQLVRIMARFNL---KLCSTYFNSRDYYVNIKKAMLAG 581
Query: 206 MY 207
+
Sbjct: 582 YF 583
>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 768
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 22 FLSQTLDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMN 81
F + +DPP L +++NAV +L +G L+ KLT++G+++ P+ P+ +M+I S
Sbjct: 633 FQFEFMDPPPLDALKNAVELLCNLGALNGHVKLTKVGRRMAEFPLDPMLSKMIIASEKYK 692
Query: 82 CLDPALTLECA-SVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQN 140
C D +++ SV F P ++K A AR + G DH+ + V+ W+
Sbjct: 693 CSDEIISIAAMLSVGGSIFYSP--KNKKVHADNARMNFHT--GNVGDHIAHLNVYNSWKE 748
Query: 141 STRMGLEERFCSQYFVS 157
S ++C + ++
Sbjct: 749 SN---YSRQWCYENYIQ 762
>Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr2:42091662-42101447 | 20130731
Length = 1269
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +I N++ L +G L+ LTELG K+ P+ P +ML+ + CL+
Sbjct: 956 MDPPPQDNILNSMYQLWVLGALNNVGGLTELGWKMVEFPLDPPLAKMLLMGERLGCLEEV 1015
Query: 87 LTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNSTRMGL 146
LT+ F P E+ AA RF + SDHL + V++ W+ G
Sbjct: 1016 LTIVSMLSVPSVFFRPKDRAEESDAARERFFVPE-----SDHLTLYNVYQQWKQHDYRG- 1069
Query: 147 EERFCSQYFVSQSTMHMLSSMRTEL 171
+C+ +F+ + +R++L
Sbjct: 1070 --DWCNDHFLHVKGLRKAREVRSQL 1092
>Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | scaffold1543:1149-130 | 20130731
Length = 304
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +I N++ L +G L+ + +LTELG K+ P+ P +ML+ CL+
Sbjct: 154 IDPPPRDNILNSMYQLLMLGALNNAGRLTELGWKMVEFPLDPPLAKMLLMGEHFGCLEEV 213
Query: 87 LTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNSTRMGL 146
LT+ F P E+ AA RF + SDHL + V++ W+ G
Sbjct: 214 LTIVSMLSVPSVFFRPKDRAEESDAARERFFVPE-----SDHLTLYNVYQQWKQHDYRG- 267
Query: 147 EERFCSQYF 155
+C+ +F
Sbjct: 268 --DWCNDHF 274
>Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr1:38781865-38776805 | 20130731
Length = 721
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +++ A+ VL +G L + LT+LG+ + P+ P +ML+ S NC +
Sbjct: 451 MDPPAPETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEI 510
Query: 87 LTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNSTRMGL 146
L++ + F P + +K A A+ + G DHL ++ V+ ++ +
Sbjct: 511 LSISAMLSVPNCFIRP--REAQKAADEAKARFGHIDG---DHLTLLNVYHAYKQNNE--- 562
Query: 147 EERFCSQYFVSQSTMHMLSSMRTEL 171
+ +C FV+ + ++R +L
Sbjct: 563 DASWCYDNFVNNRALKSADNVRQQL 587
>Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:20814127-20817509 | 20130731
Length = 715
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +++ A+ VL +G + + LT+LGK + P+ P +ML+ S NC +
Sbjct: 474 MDPPAPETLMRALEVLNYLGAMDDEGNLTKLGKIMSEFPLDPQMSKMLVVSPEFNCSNEI 533
Query: 87 LTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNSTRMGL 146
L++ + F P A ARF DHL ++ V+ ++ +
Sbjct: 534 LSISAMLSVPNCFIRPKEAQIAADEAKARFIHVD-----GDHLTLLNVYHAYKQNNE--- 585
Query: 147 EERFCSQYFVSQSTMHMLSSMRTEL 171
+ +C F++ + ++R +L
Sbjct: 586 DASWCYDNFINYRVLKSADNVRQQL 610
>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +++ A+ +L + L++ +LT++G+++ P+ P+ +M++ S C +
Sbjct: 793 MDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVVSEKYKCSEDI 852
Query: 87 LTLECA-SVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNSTRMG 145
+++ S+ + F P D++ A AR + G DH+ ++ V+ W+ +
Sbjct: 853 ISIAAMLSIGNSIFYRP--KDKQVHADNARLNFHT--GNVGDHMALLKVYNSWKET---N 905
Query: 146 LEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNSHDPGILNAVLVAG 205
++C + ++ +M +R +LA GL+ N +D + + +G
Sbjct: 906 YSTQWCYENYIQVRSMKRARDIRDQLA------GLLERVEIELTTNPNDLDAIKKSITSG 959
Query: 206 MYPVLGKSLPNES 218
+P K N S
Sbjct: 960 FFPHSSKLQKNGS 972
>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +++ A+ +L + L++ +LT++G+++ P+ P+ +M++ S C +
Sbjct: 793 MDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVVSEKYKCSEDI 852
Query: 87 LTLECA-SVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNSTRMG 145
+++ S+ + F P D++ A AR + G DH+ ++ V+ W+ +
Sbjct: 853 ISIAAMLSIGNSIFYRP--KDKQVHADNARLNFHT--GNVGDHMALLKVYNSWKET---N 905
Query: 146 LEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNSHDPGILNAVLVAG 205
++C + ++ +M +R +LA GL+ N +D + + +G
Sbjct: 906 YSTQWCYENYIQVRSMKRARDIRDQLA------GLLERVEIELTTNPNDLDAIKKSITSG 959
Query: 206 MYPVLGKSLPNES 218
+P K N S
Sbjct: 960 FFPHSSKLQKNGS 972
>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 27 LDPPDLKSIENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPA 86
+DPP +++ A+ +L + L++ +LT++G+++ P+ P+ +M++ S C +
Sbjct: 793 MDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVVSEKYKCSEDI 852
Query: 87 LTLECA-SVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNSTRMG 145
+++ S+ + F P D++ A AR + G DH+ ++ V+ W+ +
Sbjct: 853 ISIAAMLSIGNSIFYRP--KDKQVHADNARLNFHT--GNVGDHMALLKVYNSWKET---N 905
Query: 146 LEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNSHDPGILNAVLVAG 205
++C + ++ +M +R +LA GL+ N +D + + +G
Sbjct: 906 YSTQWCYENYIQVRSMKRARDIRDQLA------GLLERVEIELTTNPNDLDAIKKSITSG 959
Query: 206 MYPVLGKSLPNES 218
+P K N S
Sbjct: 960 FFPHSSKLQKNGS 972
>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr5:31994096-31996650 | 20130731
Length = 808
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 15/196 (7%)
Query: 36 ENAVAVLQRIGVLSESEKLTELGKKLGSLPVHPLAGRMLIFSILMNCLDPALTLECA-SV 94
+N +QR + + L LGK++ P+ P+ +M++ S C D +++ SV
Sbjct: 559 DNTTPEIQRTNLANVVLTLNSLGKRMAEFPLDPMLSKMIVASEKYKCSDEIISIAAMLSV 618
Query: 95 FDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPIIAVFECWQNSTRMGLEERFCSQY 154
+ F P D++ A AR + G DH+ + VF W+ + ++C +
Sbjct: 619 GNSIFYRP--RDKQVHADNARMNFHT--GDVGDHIAHLKVFNSWKEA---NYSTQWCFEN 671
Query: 155 FVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNSHDPGILNAVLVAGMYPVLGKSL 214
+V +M +R +LA GL+ N ++ + +++G +P K L
Sbjct: 672 YVQVRSMKRARDIRDQLA------GLLERVEIELTSNPNNLDAIRKSILSGFFPNSAK-L 724
Query: 215 PNESGKRVFVKTETCN 230
+ R F +T +
Sbjct: 725 QKDGTYRRFKHLQTVH 740