Miyakogusa Predicted Gene

Lj0g3v0057889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0057889.1 tr|G7I5V4|G7I5V4_MEDTR GTPase obg OS=Medicago
truncatula GN=MTR_1g023160 PE=4 SV=1,68.62,0,seg,NULL; P-loop
containing nucleoside triphosphate hydrolases,NULL; Obg GTP-binding
protein N-termi,NODE_55911_length_1868_cov_49.085117.path1.1
         (476 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g023160.1 | GTP-binding protein Obg2, putative | HC | chr1...   675   0.0  
Medtr2g019790.1 | Obg family GTPase CgtA | HC | chr2:6528744-652...   164   2e-40
Medtr2g019790.2 | Obg family GTPase CgtA | HC | chr2:6528707-652...   164   2e-40
Medtr1g073010.1 | Obg family GTPase CgtA | HC | chr1:32424577-32...   120   3e-27
Medtr2g030370.1 | GTP-binding protein | HC | chr2:11409528-11417...    63   5e-10
Medtr3g094880.1 | developmentally regulated GTP-binding protein ...    59   8e-09
Medtr2g030335.1 | 50S ribosome-binding GTPase | LC | chr2:113929...    54   3e-07

>Medtr1g023160.1 | GTP-binding protein Obg2, putative | HC |
           chr1:7356764-7361982 | 20130731
          Length = 496

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/485 (70%), Positives = 390/485 (80%), Gaps = 15/485 (3%)

Query: 4   LTSPPSFCRIQLQETRFFSTPLLP-PCSRIEFPNPKCKTVVVECRVTSAN-NASPPSTAL 61
           ++ PPSF  I L +TRF +   L  P    +F   K KT+  +CR+ + N    PPS AL
Sbjct: 6   ISPPPSFLTIHLPKTRFSNNHFLQLPQRTFKFQQHKRKTI--QCRIQTLNPTQPPPSPAL 63

Query: 62  AKEPHKYFDHAVITVRGGDGGHGAVLNQ-----------KVKEEKETKNWKKSSFKRDFD 110
            KEPHK+FD  +ITVRGGDGGHGA+LNQ           K K+     + KKS+ KRDFD
Sbjct: 64  TKEPHKFFDQVIITVRGGDGGHGAILNQKPKKEIEKPKSKTKKAIIDNSHKKSALKRDFD 123

Query: 111 GSIVLPLGGHGGDVLVYADESKDTLLEFHNKGRFNAKRGGNVDAMGLLTSHLRDGLAAPT 170
           GS++LP+GGHGGDV++YADE KDTLLEFH+K RFNAKRGGNVDA+G+ TS+LR+G++APT
Sbjct: 124 GSLILPMGGHGGDVILYADEGKDTLLEFHSKSRFNAKRGGNVDAVGVFTSYLRNGISAPT 183

Query: 171 LRIAVPLGTVVKSKRGKTLADLAQPGDEVIVARGGQGGISLLEMPQNKRKKMMALTTNVM 230
           +RI VPLGTVVKSKRGK LADLA+PGDEV+VARGGQGGISLLEMP++ RKK  +LTTNVM
Sbjct: 184 VRIPVPLGTVVKSKRGKMLADLARPGDEVLVARGGQGGISLLEMPRHNRKKATSLTTNVM 243

Query: 231 RDESDKVLVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTT 290
           RD+SDKVLVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTT
Sbjct: 244 RDDSDKVLVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTT 303

Query: 291 LMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXD 350
           LMPNLGRL GDP+LGAGMYSSEATLADLPGLIEGAHLGKGLGRNF              D
Sbjct: 304 LMPNLGRLDGDPNLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVD 363

Query: 351 AATEDPINDYRTVREELRMYNPEYLERPYIVVLNKIDLPEVKDRLPLLTREILRIGNDGA 410
           A+TE+P+NDYRTVREELRMYNPEYLERPYIVVLNKIDLPEV+DRLP LT+EI+RIG++GA
Sbjct: 364 ASTENPVNDYRTVREELRMYNPEYLERPYIVVLNKIDLPEVEDRLPTLTQEIMRIGSNGA 423

Query: 411 ASEQKEQSEVAAQLLSDESDKKERTLEDYXXXXXXXXXXXXKGIRIKEMLKEIRAALRKC 470
           ASE K  SEV+AQLLS+ESD KE+ LEDY            K IR+ EMLKEIRAALR+C
Sbjct: 424 ASEPKPSSEVSAQLLSEESDPKEKKLEDYPRPHSVIGVSVLKRIRVSEMLKEIRAALRQC 483

Query: 471 KDSNE 475
            DS E
Sbjct: 484 VDSKE 488


>Medtr2g019790.1 | Obg family GTPase CgtA | HC |
           chr2:6528744-6523643 | 20130731
          Length = 617

 Score =  164 bits (414), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 175/332 (52%), Gaps = 55/332 (16%)

Query: 67  KYFDHAVITVRGGDGGHGAVLNQKVKEEKETKNWKKSSFKRDFDGSIVLPLGGHGG---- 122
           + FD A I  + GDGG+G++                 +F+R+      +P GG  G    
Sbjct: 161 RCFDRAKIFAKAGDGGNGSM-----------------AFRRE----KYVPFGGPSGGDGG 199

Query: 123 ---DVLVYADESKDTLLEFHNKGRFNAKRGGNVDAMGLLTSHLRDGLAAPTLRIAVPLGT 179
              +V V  D++ ++LL F N   F A RG +          ++ G     + + VP GT
Sbjct: 200 RGGNVYVEVDKAMNSLLPFRNGIHFRAGRGSHGQG------RMQIGAKGDDVVVKVPPGT 253

Query: 180 VVK-SKRGKTLADLAQPGDEVIVARGGQGGISLLEMPQNKRKKMMALTTNVMRDESDKVL 238
           V++ + R + + ++  PG + ++            +P  +  +  A   +   +++ K+ 
Sbjct: 254 VIREAGREEVILEMVYPGQKALL------------LPGGRGGRGNAAFKS-GSNKAPKIA 300

Query: 239 VHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRL 298
            +G+ G E+ LEL L++VADVG++G PNAGKSTLL+ ++ AKP++A+YPFTTL+PNLG +
Sbjct: 301 ENGEQGHEMWLELELKLVADVGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVV 360

Query: 299 GGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPIN 358
             D       Y S   +ADLPGL+EGAH G GLG  F              D ++  P  
Sbjct: 361 SFD-------YDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALIHVVDGSSPQPDL 413

Query: 359 DYRTVREELRMYNPEYLERPYIVVLNKIDLPE 390
           ++  VR EL+++NPE  E+P+IV  NK+DLPE
Sbjct: 414 EFDAVRLELKLFNPELAEKPFIVAYNKMDLPE 445


>Medtr2g019790.2 | Obg family GTPase CgtA | HC |
           chr2:6528707-6523643 | 20130731
          Length = 617

 Score =  164 bits (414), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 175/332 (52%), Gaps = 55/332 (16%)

Query: 67  KYFDHAVITVRGGDGGHGAVLNQKVKEEKETKNWKKSSFKRDFDGSIVLPLGGHGG---- 122
           + FD A I  + GDGG+G++                 +F+R+      +P GG  G    
Sbjct: 161 RCFDRAKIFAKAGDGGNGSM-----------------AFRRE----KYVPFGGPSGGDGG 199

Query: 123 ---DVLVYADESKDTLLEFHNKGRFNAKRGGNVDAMGLLTSHLRDGLAAPTLRIAVPLGT 179
              +V V  D++ ++LL F N   F A RG +          ++ G     + + VP GT
Sbjct: 200 RGGNVYVEVDKAMNSLLPFRNGIHFRAGRGSHGQG------RMQIGAKGDDVVVKVPPGT 253

Query: 180 VVK-SKRGKTLADLAQPGDEVIVARGGQGGISLLEMPQNKRKKMMALTTNVMRDESDKVL 238
           V++ + R + + ++  PG + ++            +P  +  +  A   +   +++ K+ 
Sbjct: 254 VIREAGREEVILEMVYPGQKALL------------LPGGRGGRGNAAFKS-GSNKAPKIA 300

Query: 239 VHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRL 298
            +G+ G E+ LEL L++VADVG++G PNAGKSTLL+ ++ AKP++A+YPFTTL+PNLG +
Sbjct: 301 ENGEQGHEMWLELELKLVADVGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVV 360

Query: 299 GGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPIN 358
             D       Y S   +ADLPGL+EGAH G GLG  F              D ++  P  
Sbjct: 361 SFD-------YDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALIHVVDGSSPQPDL 413

Query: 359 DYRTVREELRMYNPEYLERPYIVVLNKIDLPE 390
           ++  VR EL+++NPE  E+P+IV  NK+DLPE
Sbjct: 414 EFDAVRLELKLFNPELAEKPFIVAYNKMDLPE 445


>Medtr1g073010.1 | Obg family GTPase CgtA | HC |
           chr1:32424577-32421281 | 20130731
          Length = 512

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 110/213 (51%), Gaps = 22/213 (10%)

Query: 189 LADLAQPGDEVIVARGGQGGISLLEMPQNKRKKMMA------LTTNVM-RDESDKVLVHG 241
           +A+L + G ++IVARGG+GG+  + + ++ RK            TN+   D  +  L  G
Sbjct: 250 VAELTEEGQQIIVARGGEGGLGNVSIQKDPRKPPTTKAGAGQHVTNLQDTDSVNSSLSTG 309

Query: 242 QPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGD 301
            PG E  L L L+ +ADV  +G+PNAGKSTLL AI+ AKP +  Y FTTL PNLG L  D
Sbjct: 310 LPGSESVLILELKCIADVSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNYD 369

Query: 302 PSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDP----I 357
                        +AD+PGLI+GAH  +GLG  F              D A   P    I
Sbjct: 370 --------DMSIIVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDVAAALPGRKGI 421

Query: 358 NDYRTVRE---ELRMYNPEYLERPYIVVLNKID 387
           + +  +++   EL  +      RP ++V NKID
Sbjct: 422 SPWEQLKDLVLELEYHLEGLSNRPSLIVANKID 454


>Medtr2g030370.1 | GTP-binding protein | HC | chr2:11409528-11417205
           | 20130731
          Length = 394

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 19/137 (13%)

Query: 259 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGM---------Y 309
           +G++GLPN GKSTL   +T       ++PF T+ PN  R+         +          
Sbjct: 27  IGIVGLPNVGKSTLFNTLTKMAIPAENFPFCTIEPNEARVNVPDERFEWLCQLFKPKSEV 86

Query: 310 SSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAA----------TEDPIND 359
           S+   + D+ GL+ GAH G+GLG +F               A           T DP+ D
Sbjct: 87  SAFLEIHDIAGLVRGAHQGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDTVDPVRD 146

Query: 360 YRTVREELRMYNPEYLE 376
              + EELR+ + E+++
Sbjct: 147 LEVITEELRLKDIEFMQ 163


>Medtr3g094880.1 | developmentally regulated GTP-binding protein |
           HC | chr3:43301025-43311806 | 20130731
          Length = 368

 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 14/113 (12%)

Query: 257 ADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTL--MPNLGRLGGDPSLGAGMYSSEAT 314
           A VGL+G P+ GKSTLL  +T    ++A Y FTTL  +P +    G          ++  
Sbjct: 65  ARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRG----------AKIQ 114

Query: 315 LADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPINDYRTVREEL 367
           L DLPG+IEGA  GKG GR                DA    PI   R + +EL
Sbjct: 115 LLDLPGIIEGAKDGKGRGRQVISTARTCNCILIVLDAI--KPITHKRLIEKEL 165


>Medtr2g030335.1 | 50S ribosome-binding GTPase | LC |
           chr2:11392921-11395427 | 20130731
          Length = 209

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 259 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGM---------Y 309
           +G++GLPN GKSTL   +T       ++PF T+ PN  R+         +          
Sbjct: 27  IGIVGLPNVGKSTLFNTLTKMAIPAENFPFCTIEPNEARVNVPDERFEWLCQLFKPKSEV 86

Query: 310 SSEATLADLPGLIEGAHLGKGLGRNF 335
           S+   + D+ GL+ GAH G+GLG +F
Sbjct: 87  SAFLEIHDIAGLVRGAHQGQGLGNSF 112