Miyakogusa Predicted Gene

Lj0g3v0057319.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0057319.1 Non Characterized Hit- tr|B9RF70|B9RF70_RICCO
Always early, putative OS=Ricinus communis
GN=RCOM_143,55.43,4e-17,SANT,SANT domain; LIN-9-RELATED,NULL;
LIN-9,NULL; seg,NULL; Homeodomain-like,Homeodomain-like; no
de,CUFF.2507.1
         (90 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g083040.5 | always EARLY-like protein | HC | chr1:36931175...   134   1e-32
Medtr1g083040.3 | always EARLY-like protein | HC | chr1:36931175...   134   1e-32
Medtr1g083040.4 | always EARLY-like protein | HC | chr1:36931175...   134   1e-32
Medtr1g083040.2 | always EARLY-like protein | HC | chr1:36931175...   134   1e-32
Medtr1g083040.6 | always EARLY-like protein | HC | chr1:36931175...   134   1e-32
Medtr1g083040.1 | always EARLY-like protein | HC | chr1:36931175...   134   1e-32
Medtr1g083040.7 | always EARLY-like protein | HC | chr1:36931175...   134   2e-32
Medtr4g119390.1 | always EARLY-like protein | HC | chr4:49426944...    92   1e-19
Medtr4g119390.2 | always EARLY-like protein | HC | chr4:49426944...    92   1e-19

>Medtr1g083040.5 | always EARLY-like protein | HC |
          chr1:36931175-36944066 | 20130731
          Length = 1135

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 72/89 (80%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR  NSND+SPEKDGV S+             GSQWSK EL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRFKNSNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNR 89
          K+GK+WKKVA+AVRNRSIEMVEALYN+NR
Sbjct: 61 KHGKDWKKVAAAVRNRSIEMVEALYNMNR 89


>Medtr1g083040.3 | always EARLY-like protein | HC |
          chr1:36931175-36944066 | 20130731
          Length = 1124

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/90 (71%), Positives = 72/90 (80%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR  NSND+SPEKDGV S+             GSQWSK EL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRFKNSNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNRV 90
          K+GK+WKKVA+AVRNRSIEMVEALYN+NR 
Sbjct: 61 KHGKDWKKVAAAVRNRSIEMVEALYNMNRA 90


>Medtr1g083040.4 | always EARLY-like protein | HC |
          chr1:36931175-36944066 | 20130731
          Length = 1122

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/90 (71%), Positives = 72/90 (80%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR  NSND+SPEKDGV S+             GSQWSK EL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRFKNSNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNRV 90
          K+GK+WKKVA+AVRNRSIEMVEALYN+NR 
Sbjct: 61 KHGKDWKKVAAAVRNRSIEMVEALYNMNRA 90


>Medtr1g083040.2 | always EARLY-like protein | HC |
          chr1:36931175-36944066 | 20130731
          Length = 1122

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/90 (71%), Positives = 72/90 (80%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR  NSND+SPEKDGV S+             GSQWSK EL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRFKNSNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNRV 90
          K+GK+WKKVA+AVRNRSIEMVEALYN+NR 
Sbjct: 61 KHGKDWKKVAAAVRNRSIEMVEALYNMNRA 90


>Medtr1g083040.6 | always EARLY-like protein | HC |
          chr1:36931175-36944066 | 20130731
          Length = 1111

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/90 (71%), Positives = 72/90 (80%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR  NSND+SPEKDGV S+             GSQWSK EL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRFKNSNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNRV 90
          K+GK+WKKVA+AVRNRSIEMVEALYN+NR 
Sbjct: 61 KHGKDWKKVAAAVRNRSIEMVEALYNMNRA 90


>Medtr1g083040.1 | always EARLY-like protein | HC |
          chr1:36931175-36944066 | 20130731
          Length = 1111

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/90 (71%), Positives = 72/90 (80%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR  NSND+SPEKDGV S+             GSQWSK EL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRFKNSNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNRV 90
          K+GK+WKKVA+AVRNRSIEMVEALYN+NR 
Sbjct: 61 KHGKDWKKVAAAVRNRSIEMVEALYNMNRA 90


>Medtr1g083040.7 | always EARLY-like protein | HC |
          chr1:36931175-36941018 | 20130731
          Length = 826

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/90 (71%), Positives = 72/90 (80%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR  NSND+SPEKDGV S+             GSQWSK EL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRFKNSNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNRV 90
          K+GK+WKKVA+AVRNRSIEMVEALYN+NR 
Sbjct: 61 KHGKDWKKVAAAVRNRSIEMVEALYNMNRA 90


>Medtr4g119390.1 | always EARLY-like protein | HC |
          chr4:49426944-49447981 | 20130731
          Length = 1163

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/99 (52%), Positives = 61/99 (61%), Gaps = 9/99 (9%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXX---------XXXXGSQWSKEE 51
          M PT+KSRSVNKR SN  + +  KD   +N                      G QWSK E
Sbjct: 1  MGPTRKSRSVNKRFSNIREAAASKDKDAANTGRNRQKACPGIQKKRKLADMLGPQWSKAE 60

Query: 52 LQRFYEAYRKYGKEWKKVASAVRNRSIEMVEALYNLNRV 90
          L+RFYEAYR+YGK+WKKVA AVRNR++EMVEALY  NR 
Sbjct: 61 LERFYEAYREYGKDWKKVALAVRNRTMEMVEALYTKNRA 99


>Medtr4g119390.2 | always EARLY-like protein | HC |
          chr4:49426944-49447981 | 20130731
          Length = 1198

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/99 (52%), Positives = 61/99 (61%), Gaps = 9/99 (9%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXX---------XXXXGSQWSKEE 51
          M PT+KSRSVNKR SN  + +  KD   +N                      G QWSK E
Sbjct: 1  MGPTRKSRSVNKRFSNIREAAASKDKDAANTGRNRQKACPGIQKKRKLADMLGPQWSKAE 60

Query: 52 LQRFYEAYRKYGKEWKKVASAVRNRSIEMVEALYNLNRV 90
          L+RFYEAYR+YGK+WKKVA AVRNR++EMVEALY  NR 
Sbjct: 61 LERFYEAYREYGKDWKKVALAVRNRTMEMVEALYTKNRA 99