Miyakogusa Predicted Gene

Lj0g3v0056999.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0056999.1 Non Characterized Hit- tr|I1K1E1|I1K1E1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.42,0,Med17,Mediator complex, subunit
Med17,NODE_11014_length_1970_cov_129.155334.path1.1
         (581 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g114100.1 | RNA polymerase II transcription mediators prot...   975   0.0  
Medtr4g114100.2 | RNA polymerase II transcription mediators prot...   920   0.0  

>Medtr4g114100.1 | RNA polymerase II transcription mediators protein
           | HC | chr4:46959573-46965802 | 20130731
          Length = 660

 Score =  975 bits (2520), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/583 (82%), Positives = 519/583 (89%), Gaps = 4/583 (0%)

Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVASMTRPKLLPNEALSDLAVSAATKLQCYRQ 60
           M+ENLQLAHQELSVIID INTVE NDAVTVASMTRPK LPNEALSDLAVSAATKLQCYRQ
Sbjct: 77  MVENLQLAHQELSVIIDFINTVETNDAVTVASMTRPKSLPNEALSDLAVSAATKLQCYRQ 136

Query: 61  VGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKVKRQRQPAIGPGNEGFTFDLFDNTYD 120
           VGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKVKRQRQ ++ PGNEGFTFDLFDN+YD
Sbjct: 137 VGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKVKRQRQTSLVPGNEGFTFDLFDNSYD 196

Query: 121 QAAIIRSSLMSTVRVNHDAAGMLAINVSPNSCHSLQFGFVGTQSDDTQGKSNENKSD--S 178
           Q AI+RSS MSTVRVNHDAAGMLAINVSP  CHSLQFGFV  Q DD Q KSNEN+S    
Sbjct: 197 QGAIVRSSSMSTVRVNHDAAGMLAINVSPELCHSLQFGFVSAQPDDMQKKSNENQSHLLG 256

Query: 179 EHHLGETGKESLSDEGCVKKTNSLLREVHKAIFNEQVFDLVNREAFNTSTVVSVTGIREN 238
           E  LGETG ES SDE CVKKT+SLLR+VH+AIFNEQVFDLVNREAFNTST  ++TGIREN
Sbjct: 257 EDCLGETGIESSSDEECVKKTHSLLRDVHQAIFNEQVFDLVNREAFNTSTGFTLTGIREN 316

Query: 239 YLQLSLGQRTSVYLSLVSSGQDHTRVEGELTNNV-ENAILPFESSDGMKHDAKWNTIKKK 297
           YLQLSLGQ TSVYLSLVS+GQD+  VEGELTNN  +NA  P ESSD + HDA+ NT+KKK
Sbjct: 317 YLQLSLGQGTSVYLSLVSTGQDNPTVEGELTNNADDNAFSPLESSDVLMHDAQQNTLKKK 376

Query: 298 GQFSNSTCYEIYIQQIYHELIFGRGSEKPTSSGSRLSGAQAKDGSSLLSHFFMSLAHRIF 357
           G+ SNSTCYEIYIQQIYHE IFGRGSEKP SSG+RLSGAQAKDGS LLSHFFMSLAHRIF
Sbjct: 377 GRHSNSTCYEIYIQQIYHEHIFGRGSEKPISSGNRLSGAQAKDGSYLLSHFFMSLAHRIF 436

Query: 358 STKVLAELENVVCKVPYLQLISNPTWHSRGSSWTLFMEVPRSILRGSQIKTVEYCEKNTI 417
           STK+LAELENVV KVPYLQLISNPTWHSRGSSWTLFMEVP SILRG Q+KT ++ E N I
Sbjct: 437 STKILAELENVVFKVPYLQLISNPTWHSRGSSWTLFMEVPPSILRGCQVKTSDF-ENNAI 495

Query: 418 KRQFWTKVVVNDDCIIVKAEGSPNVAGLFKGKSEETHSINKYNCNLADLGVVILQQVASQ 477
           KRQFWTKVVV DDCI VKAEGSPNV+GLFKGKSE+THSINKY+CNLADL V+ILQQVASQ
Sbjct: 496 KRQFWTKVVVIDDCISVKAEGSPNVSGLFKGKSEDTHSINKYDCNLADLPVIILQQVASQ 555

Query: 478 IMNWLHQEALMVGIKVNRDFLSLSFELEQGETLGLVANVDPEDVEGGISWWLVMEDSFAE 537
           I+NWL+ EALMVGIK NRDFL LSFELEQGETLGLVANVDP+D +G ISW LVMEDSFAE
Sbjct: 556 IINWLYHEALMVGIKANRDFLCLSFELEQGETLGLVANVDPKDSDGCISWSLVMEDSFAE 615

Query: 538 EQKLHINATNGASEYRKFLGHLSLDLLYATLMDFVSLCSGGSG 580
            QKLH N T+GASEYRKFLG LSL+LLYATL+D ++  SGG G
Sbjct: 616 VQKLHTNLTDGASEYRKFLGPLSLELLYATLIDLIAFVSGGGG 658


>Medtr4g114100.2 | RNA polymerase II transcription mediators protein
           | HC | chr4:46962068-46965802 | 20130731
          Length = 552

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/551 (82%), Positives = 489/551 (88%), Gaps = 4/551 (0%)

Query: 33  MTRPKLLPNEALSDLAVSAATKLQCYRQVGKYFKQSAKAFEQQVAREARFYGALIRLQQN 92
           MTRPK LPNEALSDLAVSAATKLQCYRQVGKYFKQSAKAFEQQVAREARFYGALIRLQQN
Sbjct: 1   MTRPKSLPNEALSDLAVSAATKLQCYRQVGKYFKQSAKAFEQQVAREARFYGALIRLQQN 60

Query: 93  WKVKRQRQPAIGPGNEGFTFDLFDNTYDQAAIIRSSLMSTVRVNHDAAGMLAINVSPNSC 152
           WKVKRQRQ ++ PGNEGFTFDLFDN+YDQ AI+RSS MSTVRVNHDAAGMLAINVSP  C
Sbjct: 61  WKVKRQRQTSLVPGNEGFTFDLFDNSYDQGAIVRSSSMSTVRVNHDAAGMLAINVSPELC 120

Query: 153 HSLQFGFVGTQSDDTQGKSNENKSD--SEHHLGETGKESLSDEGCVKKTNSLLREVHKAI 210
           HSLQFGFV  Q DD Q KSNEN+S    E  LGETG ES SDE CVKKT+SLLR+VH+AI
Sbjct: 121 HSLQFGFVSAQPDDMQKKSNENQSHLLGEDCLGETGIESSSDEECVKKTHSLLRDVHQAI 180

Query: 211 FNEQVFDLVNREAFNTSTVVSVTGIRENYLQLSLGQRTSVYLSLVSSGQDHTRVEGELTN 270
           FNEQVFDLVNREAFNTST  ++TGIRENYLQLSLGQ TSVYLSLVS+GQD+  VEGELTN
Sbjct: 181 FNEQVFDLVNREAFNTSTGFTLTGIRENYLQLSLGQGTSVYLSLVSTGQDNPTVEGELTN 240

Query: 271 NVE-NAILPFESSDGMKHDAKWNTIKKKGQFSNSTCYEIYIQQIYHELIFGRGSEKPTSS 329
           N + NA  P ESSD + HDA+ NT+KKKG+ SNSTCYEIYIQQIYHE IFGRGSEKP SS
Sbjct: 241 NADDNAFSPLESSDVLMHDAQQNTLKKKGRHSNSTCYEIYIQQIYHEHIFGRGSEKPISS 300

Query: 330 GSRLSGAQAKDGSSLLSHFFMSLAHRIFSTKVLAELENVVCKVPYLQLISNPTWHSRGSS 389
           G+RLSGAQAKDGS LLSHFFMSLAHRIFSTK+LAELENVV KVPYLQLISNPTWHSRGSS
Sbjct: 301 GNRLSGAQAKDGSYLLSHFFMSLAHRIFSTKILAELENVVFKVPYLQLISNPTWHSRGSS 360

Query: 390 WTLFMEVPRSILRGSQIKTVEYCEKNTIKRQFWTKVVVNDDCIIVKAEGSPNVAGLFKGK 449
           WTLFMEVP SILRG Q+KT ++ E N IKRQFWTKVVV DDCI VKAEGSPNV+GLFKGK
Sbjct: 361 WTLFMEVPPSILRGCQVKTSDF-ENNAIKRQFWTKVVVIDDCISVKAEGSPNVSGLFKGK 419

Query: 450 SEETHSINKYNCNLADLGVVILQQVASQIMNWLHQEALMVGIKVNRDFLSLSFELEQGET 509
           SE+THSINKY+CNLADL V+ILQQVASQI+NWL+ EALMVGIK NRDFL LSFELEQGET
Sbjct: 420 SEDTHSINKYDCNLADLPVIILQQVASQIINWLYHEALMVGIKANRDFLCLSFELEQGET 479

Query: 510 LGLVANVDPEDVEGGISWWLVMEDSFAEEQKLHINATNGASEYRKFLGHLSLDLLYATLM 569
           LGLVANVDP+D +G ISW LVMEDSFAE QKLH N T+GASEYRKFLG LSL+LLYATL+
Sbjct: 480 LGLVANVDPKDSDGCISWSLVMEDSFAEVQKLHTNLTDGASEYRKFLGPLSLELLYATLI 539

Query: 570 DFVSLCSGGSG 580
           D ++  SGG G
Sbjct: 540 DLIAFVSGGGG 550