Miyakogusa Predicted Gene

Lj0g3v0056439.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0056439.1 Non Characterized Hit- tr|I1JF47|I1JF47_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57741
PE,84.8,0,HYPOTHETICAL PROTEIN,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL; seg,NULL; RNI-like,NULL; no
descr,NODE_36425_length_1584_cov_28.639521.path1.1
         (455 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g070515.1 | F-box/LRR protein, putative | HC | chr1:313287...   688   0.0  
Medtr1g070515.2 | F-box/LRR protein, putative | HC | chr1:313287...   609   e-174
Medtr2g066740.1 | hypothetical protein | LC | chr2:27891536-2789...    92   1e-18
Medtr0878s0020.1 | F-box/LRR protein | HC | scaffold0878:2362-26...    86   1e-16

>Medtr1g070515.1 | F-box/LRR protein, putative | HC |
           chr1:31328771-31333555 | 20130731
          Length = 609

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/440 (78%), Positives = 369/440 (83%), Gaps = 1/440 (0%)

Query: 15  VCRGWRETAKRLWKAAEELKLRVPANVQVGFVASMLQKCPGIVRLSLRMESDFDSTMLAC 74
           VC+GWRETA++LWKA EELKLRVP  V VGFVASMLQKCPGI+RLSLRMESDFDSTMLAC
Sbjct: 170 VCKGWRETARKLWKATEELKLRVPVKVHVGFVASMLQKCPGILRLSLRMESDFDSTMLAC 229

Query: 75  IAFSCPNLECMEICIFDTATNRINGDELSRFVADKRSLKSLKMEGCSNLGGFAXXXXXXX 134
           IAFSCPNLE MEI +FDTATNRINGDEL RFVADKR+LK+LKMEGCSNLGGF        
Sbjct: 230 IAFSCPNLESMEISVFDTATNRINGDELGRFVADKRNLKTLKMEGCSNLGGFVLSSSSLS 289

Query: 135 XXXXXXXXXXXKMVFNCPQLREISLEFSSQDDDGTDLITMIESLGRSCLKLQNIHIASVR 194
                      KMVFNCPQLREISLEFS Q++  TDLITMIE LGRSCLKLQNIHIAS+R
Sbjct: 290 TLWLSDLHSLSKMVFNCPQLREISLEFSCQENASTDLITMIEGLGRSCLKLQNIHIASMR 349

Query: 195 LSHAAVLALTAAQLRGLRMLSLVLGSEITDASVAAIASSYPNXXXXXXXXXXXXXXXXXM 254
           LSHAAVLALTAAQLRGLRMLSLVLGSE+TDASVAAIASSYPN                 M
Sbjct: 350 LSHAAVLALTAAQLRGLRMLSLVLGSELTDASVAAIASSYPNLELLDLSGSGISDSGIGM 409

Query: 255 ICNVFPETLARLLLALCPNVTSSGIQFATAQLPLLELMDCGMTICDPNSLNLPADEND-E 313
           ICNVFPETL RLLLALCPNVTSSGIQFATAQLPLLELMDCGMTICDPN  +    EN+ +
Sbjct: 410 ICNVFPETLKRLLLALCPNVTSSGIQFATAQLPLLELMDCGMTICDPNFPDPTTVENNGK 469

Query: 314 SQKTSSTNLHLINQKLIIKHSRLKKLSLWGCTSLDGLYLNCPQLNDLNLNSCRNLIPERL 373
           S KTSS NL  INQKLIIKHSRLKKLSLWGCT LD LYLNCP+LNDLNLNSCRNL  ERL
Sbjct: 470 SLKTSSANLQHINQKLIIKHSRLKKLSLWGCTGLDALYLNCPELNDLNLNSCRNLHSERL 529

Query: 374 LLQCPTLENVHASGCQDMLVEAIQSQVRDACSSMENQSPSKRLPDGSKRVRVPYSLSSET 433
           LLQCPTLENVHASGCQD+LVEAIQSQVR+   +++N SPSKRLPDGSKRVRVPY LS E+
Sbjct: 530 LLQCPTLENVHASGCQDLLVEAIQSQVRNVFPAIDNHSPSKRLPDGSKRVRVPYLLSGES 589

Query: 434 PEPEKKRRRVDRRLCNVLVD 453
           PEPEKKRRR++R  CNVLVD
Sbjct: 590 PEPEKKRRRIERLPCNVLVD 609


>Medtr1g070515.2 | F-box/LRR protein, putative | HC |
           chr1:31328771-31333514 | 20130731
          Length = 568

 Score =  609 bits (1570), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 308/387 (79%), Positives = 324/387 (83%), Gaps = 1/387 (0%)

Query: 15  VCRGWRETAKRLWKAAEELKLRVPANVQVGFVASMLQKCPGIVRLSLRMESDFDSTMLAC 74
           VC+GWRETA++LWKA EELKLRVP  V VGFVASMLQKCPGI+RLSLRMESDFDSTMLAC
Sbjct: 170 VCKGWRETARKLWKATEELKLRVPVKVHVGFVASMLQKCPGILRLSLRMESDFDSTMLAC 229

Query: 75  IAFSCPNLECMEICIFDTATNRINGDELSRFVADKRSLKSLKMEGCSNLGGFAXXXXXXX 134
           IAFSCPNLE MEI +FDTATNRINGDEL RFVADKR+LK+LKMEGCSNLGGF        
Sbjct: 230 IAFSCPNLESMEISVFDTATNRINGDELGRFVADKRNLKTLKMEGCSNLGGFVLSSSSLS 289

Query: 135 XXXXXXXXXXXKMVFNCPQLREISLEFSSQDDDGTDLITMIESLGRSCLKLQNIHIASVR 194
                      KMVFNCPQLREISLEFS Q++  TDLITMIE LGRSCLKLQNIHIAS+R
Sbjct: 290 TLWLSDLHSLSKMVFNCPQLREISLEFSCQENASTDLITMIEGLGRSCLKLQNIHIASMR 349

Query: 195 LSHAAVLALTAAQLRGLRMLSLVLGSEITDASVAAIASSYPNXXXXXXXXXXXXXXXXXM 254
           LSHAAVLALTAAQLRGLRMLSLVLGSE+TDASVAAIASSYPN                 M
Sbjct: 350 LSHAAVLALTAAQLRGLRMLSLVLGSELTDASVAAIASSYPNLELLDLSGSGISDSGIGM 409

Query: 255 ICNVFPETLARLLLALCPNVTSSGIQFATAQLPLLELMDCGMTICDPNSLNLPADEND-E 313
           ICNVFPETL RLLLALCPNVTSSGIQFATAQLPLLELMDCGMTICDPN  +    EN+ +
Sbjct: 410 ICNVFPETLKRLLLALCPNVTSSGIQFATAQLPLLELMDCGMTICDPNFPDPTTVENNGK 469

Query: 314 SQKTSSTNLHLINQKLIIKHSRLKKLSLWGCTSLDGLYLNCPQLNDLNLNSCRNLIPERL 373
           S KTSS NL  INQKLIIKHSRLKKLSLWGCT LD LYLNCP+LNDLNLNSCRNL  ERL
Sbjct: 470 SLKTSSANLQHINQKLIIKHSRLKKLSLWGCTGLDALYLNCPELNDLNLNSCRNLHSERL 529

Query: 374 LLQCPTLENVHASGCQDMLVEAIQSQV 400
           LLQCPTLENVHASGCQD+LVEAIQSQV
Sbjct: 530 LLQCPTLENVHASGCQDLLVEAIQSQV 556


>Medtr2g066740.1 | hypothetical protein | LC |
           chr2:27891536-27894398 | 20130731
          Length = 229

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 10/79 (12%)

Query: 15  VCRGWRETAKRLWKAAEELKLRVPANVQVGFVASMLQKCPGIVRLSLRMESDFDSTMLAC 74
           VC+GWRETA++LWKA EELKLRVP  V VGFVASML KC GI+RLSLRME  +D     C
Sbjct: 84  VCKGWRETARKLWKATEELKLRVPVKVHVGFVASMLHKCLGILRLSLRMER-YD-----C 137

Query: 75  IAFSCPNLECMEICIFDTA 93
           +      LEC  IC  D++
Sbjct: 138 VVV----LECFFICNDDSS 152


>Medtr0878s0020.1 | F-box/LRR protein | HC |
          scaffold0878:2362-2666 | 20130731
          Length = 100

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/50 (78%), Positives = 42/50 (84%)

Query: 15 VCRGWRETAKRLWKAAEELKLRVPANVQVGFVASMLQKCPGIVRLSLRME 64
          VC+GWRETA+ LWK  EELKLRVP  V VGFV SMLQKC GI+RLSLRME
Sbjct: 37 VCKGWRETARNLWKEMEELKLRVPVKVHVGFVVSMLQKCHGILRLSLRME 86