Miyakogusa Predicted Gene

Lj0g3v0055679.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0055679.1 Non Characterized Hit- tr|D7SVR4|D7SVR4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,64.06,1e-16,MTS,Methyltransferase small domain; no
description,NULL; seg,NULL; PUTATIVE UNCHARACTERIZED PROTEIN
,gene.g3900.t1.1
         (387 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g029350.1 | methyltransferase small domain protein | HC | ...   326   2e-89

>Medtr7g029350.1 | methyltransferase small domain protein | HC |
           chr7:10409242-10401021 | 20130731
          Length = 513

 Score =  326 bits (836), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 187/311 (60%), Positives = 203/311 (65%), Gaps = 76/311 (24%)

Query: 142 IWGWRCRAKLAVRGSSTNPLIGLYEEGTHNVIDIPECKAFSQ--------YHLGITELDI 193
           +WGWRCRAKLAVRGSSTNPLIGLYEEGTHNVIDIPECKA              GITELDI
Sbjct: 94  LWGWRCRAKLAVRGSSTNPLIGLYEEGTHNVIDIPECKAHHPNINAAVELLRRGITELDI 153

Query: 194 EPYLEDEGTGDLRYVQMAVTTYNTSLPAPER----------------------------- 224
           EPYLEDEGTG+LRYVQMAVTT+NTSLPA +R                             
Sbjct: 154 EPYLEDEGTGNLRYVQMAVTTHNTSLPAGQRYMSGKVQVTLVWNSRNEKSHGSDKLNALA 213

Query: 225 ---YKNGKVQVTL-----VWNSRS----------------------EQSPGVDKM----- 249
              +KNG  Q  L     VW +                        E   G+D       
Sbjct: 214 NFLWKNGGPQSRLHLIHSVWANFQTTDKNIIFGNRWRHLLGERDFWEHVGGIDVSLAPSS 273

Query: 250 --NALANAFDALLRKLQKYVPHESSVADLYAGAGVIGLSLAATRK--SIKCIEINKESKA 305
              A   AFD+LL+KLQKYVP+ESSVADLYAGAGVIGLSLAATRK  SIKCIEINKESK 
Sbjct: 274 FGQANTRAFDSLLQKLQKYVPYESSVADLYAGAGVIGLSLAATRKCRSIKCIEINKESKV 333

Query: 306 SFEKTIARLPSTVNSSISWHHADASKEPLLWLVGSDVVVIDPPRKGLDVSLIDALKDISS 365
           SFEKTI RLP+TV+SSI+WHHADASK+P  WLVGSDVVVIDPPRKGLD SLIDALK+IS 
Sbjct: 334 SFEKTIQRLPATVDSSITWHHADASKDPFSWLVGSDVVVIDPPRKGLDSSLIDALKNISL 393

Query: 366 IERKVLSSPER 376
           + RK LSS ER
Sbjct: 394 VARKALSSSER 404