Miyakogusa Predicted Gene

Lj0g3v0054689.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054689.1 Non Characterized Hit- tr|C5YQ59|C5YQ59_SORBI
Putative uncharacterized protein Sb08g000840
OS=Sorghu,63.64,1e-18,FAMILY NOT NAMED,NULL; TNASE_3,Staphylococcal
nuclease (SNase-like); Staphylococcal nuclease
homolog,NODE_34181_length_1569_cov_65.991074.path1.1
         (335 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g083730.1 | Ca(2+)-dependent nuclease-like protein | HC | ...   538   e-153
Medtr5g083720.1 | Ca(2+)-dependent nuclease-like protein | HC | ...   535   e-152

>Medtr5g083730.1 | Ca(2+)-dependent nuclease-like protein | HC |
           chr5:36117268-36120058 | 20130731
          Length = 326

 Score =  538 bits (1386), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 260/332 (78%), Positives = 281/332 (84%), Gaps = 7/332 (2%)

Query: 1   MGNALRFLYSNCCKPTAAGDSDSLGPHGVSSATVGVSALAHDLFHFENTSQVPEGLSKHV 60
           MGNALRFLY+NCCKP  + D           +TV VSALAHDLF+FENTSQVPEGLS+HV
Sbjct: 1   MGNALRFLYANCCKPKTSDDDHP-------QSTVSVSALAHDLFNFENTSQVPEGLSRHV 53

Query: 61  KSSKKAQANWYRKLVDAWKEAKPPPRTPEEAARLVIQTLKRHQKADVEGLLTFYGLPLPH 120
            SSKKAQA WYRKL+D WKEA+PPP+TPEEAARLVI TLK H+K DVEGLLTFYGLPL H
Sbjct: 54  VSSKKAQAKWYRKLIDGWKEARPPPKTPEEAARLVILTLKGHKKEDVEGLLTFYGLPLSH 113

Query: 121 TLVEVVAQPPTSLPHGVQYEMHTLPVDAKAVADGDTVTVYVSTADPRESSTVPANIHXXX 180
           T VEV  Q PTSLPHGVQYE+HTLPVDAKAVADGD +TVYVSTADPRESS VP+N+H   
Sbjct: 114 TPVEVPVQRPTSLPHGVQYEIHTLPVDAKAVADGDGLTVYVSTADPRESSQVPSNVHIAA 173

Query: 181 XXXXXXXXXXXXXXXDALHKQIIDAGYRMLSFQNEEVLAKKYRIRLRGIDAPESAMPYGK 240
                          DALHKQIIDAGYRM+SF+N E+LAKKYRIRLRGIDAPE+AMPYGK
Sbjct: 174 VHRAEARSRRNYQEADALHKQIIDAGYRMISFENGEILAKKYRIRLRGIDAPENAMPYGK 233

Query: 241 EAKMELTKVLQGKSLRVLIYGEDRYGRCVGDIYCNGIFVQELMLKKGLAWHYSAYDKRPE 300
           EAK ELTK++QGKSLRVLIYGED+Y R VGDIYCN IFVQELMLKKGLAWHY+AYDKRPE
Sbjct: 234 EAKTELTKIVQGKSLRVLIYGEDQYQRLVGDIYCNNIFVQELMLKKGLAWHYAAYDKRPE 293

Query: 301 LETWEKEARAKRVGLWASKNPEKPWDWRKDRR 332
           LETWEKEARAKRVGLWASKNPEKPWDWRKDRR
Sbjct: 294 LETWEKEARAKRVGLWASKNPEKPWDWRKDRR 325


>Medtr5g083720.1 | Ca(2+)-dependent nuclease-like protein | HC |
           chr5:36112402-36115994 | 20130731
          Length = 326

 Score =  535 bits (1378), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 266/333 (79%), Positives = 284/333 (85%), Gaps = 9/333 (2%)

Query: 1   MGNALRFLYSNCCKPTAAGDSDSLGPHGVSSATVGVSALAHDLFHFENTSQVPEGLSKHV 60
           MGNALRFLY+NCCKPT + D           +TVGVSAL+HDLFHFENTSQVPEGLS+HV
Sbjct: 1   MGNALRFLYANCCKPTTSDDH--------QQSTVGVSALSHDLFHFENTSQVPEGLSRHV 52

Query: 61  KSSKKAQANWYRKLVDAWKEAKPPPRTPEEAARLVIQTLKRHQKADVEGLLTFYGLPLPH 120
            SSKKAQANWYRKL+DAWKEA+P PRTPEEAA LVI TLK H+KADVEGLLTFYGLPL H
Sbjct: 53  VSSKKAQANWYRKLIDAWKEARPAPRTPEEAAGLVILTLKGHKKADVEGLLTFYGLPLSH 112

Query: 121 TLVEVVAQPP-TSLPHGVQYEMHTLPVDAKAVADGDTVTVYVSTADPRESSTVPANIHXX 179
           T VEV  QPP TSLPHGVQYE+HTLPVD KAVADGDTVTVYVSTADPRESS VP+N+H  
Sbjct: 113 TPVEVPVQPPPTSLPHGVQYEIHTLPVDEKAVADGDTVTVYVSTADPRESSRVPSNLHTV 172

Query: 180 XXXXXXXXXXXXXXXXDALHKQIIDAGYRMLSFQNEEVLAKKYRIRLRGIDAPESAMPYG 239
                           DALHKQIIDAGYRM+ F+N E+LAKKYRIRLRGIDAPES MPYG
Sbjct: 173 AAHRAEARSRRNYEEADALHKQIIDAGYRMIPFENGEILAKKYRIRLRGIDAPESKMPYG 232

Query: 240 KEAKMELTKVLQGKSLRVLIYGEDRYGRCVGDIYCNGIFVQELMLKKGLAWHYSAYDKRP 299
           KEAK ELTK++QGKSLRVLIYGEDRY RCVGDIYCN +FVQELMLKKGLAWHY+AYDKRP
Sbjct: 233 KEAKTELTKIVQGKSLRVLIYGEDRYQRCVGDIYCNNVFVQELMLKKGLAWHYAAYDKRP 292

Query: 300 ELETWEKEARAKRVGLWASKNPEKPWDWRKDRR 332
           ELETWEKEARAKRVGLWASKNPEKPWDWRKDRR
Sbjct: 293 ELETWEKEARAKRVGLWASKNPEKPWDWRKDRR 325