Miyakogusa Predicted Gene
- Lj0g3v0054419.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0054419.1 Non Characterized Hit- tr|I1MZM2|I1MZM2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,87.63,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; HELICASE_CTER,Helicase,
C-termina,NODE_88001_length_918_cov_7.385621.path1.1
(309 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 587 e-168
Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein... 253 2e-67
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 250 2e-66
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 249 2e-66
Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein... 243 3e-64
Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC | ... 223 1e-58
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 167 1e-41
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 160 1e-39
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 160 1e-39
Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC | ... 160 1e-39
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 160 1e-39
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 76 4e-14
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 76 4e-14
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 71 1e-12
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 70 2e-12
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 70 3e-12
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 70 3e-12
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 67 3e-11
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 64 2e-10
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 6e-10
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 60 2e-09
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 60 3e-09
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 60 3e-09
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 60 4e-09
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 57 3e-08
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 57 3e-08
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 4e-08
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 4e-08
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 4e-08
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 6e-08
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 55 8e-08
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 55 9e-08
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 1e-07
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 1e-07
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 1e-07
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 55 1e-07
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 54 2e-07
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 53 4e-07
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 53 4e-07
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 51 1e-06
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 2e-06
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 2e-06
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 50 2e-06
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 50 2e-06
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 50 2e-06
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 49 7e-06
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 587 bits (1512), Expect = e-168, Method: Compositional matrix adjust.
Identities = 276/309 (89%), Positives = 291/309 (94%)
Query: 1 MATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGSAQKDFTVQT 60
MATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALK+RGIKAEYL SAQKD+TVQ+
Sbjct: 38 MATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKQRGIKAEYLSSAQKDYTVQS 97
Query: 61 KAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDK 120
KAE GQFDILFMTPEKACTI TSFWSNLLK GISLFAVDEAHCISEWGHDFRVEYK LDK
Sbjct: 98 KAERGQFDILFMTPEKACTIPTSFWSNLLKEGISLFAVDEAHCISEWGHDFRVEYKQLDK 157
Query: 121 LRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFI 180
LR VL++VP+VGLTATATEKVRFDI SLKMNNPYV+VGSFDR NLFYGVK F+RGQSFI
Sbjct: 158 LRGVLLDVPYVGLTATATEKVRFDITNSLKMNNPYVVVGSFDRPNLFYGVKQFNRGQSFI 217
Query: 181 DELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLF 240
DELV E+SKEV +G STIIYCTTIKDVEQI KSLTE GI AGMYHGQM+GKSREESHRLF
Sbjct: 218 DELVEEVSKEVANGCSTIIYCTTIKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLF 277
Query: 241 VRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTR 300
VRDE+QIMVATIAFGMGIDKPNIRKVIHYGCPK++ESYYQESGRCGRDGI SVCWLYYTR
Sbjct: 278 VRDEMQIMVATIAFGMGIDKPNIRKVIHYGCPKNLESYYQESGRCGRDGIASVCWLYYTR 337
Query: 301 GDFAKGEFY 309
DFAKG+FY
Sbjct: 338 SDFAKGDFY 346
>Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr5:10949368-10935495 | 20130731
Length = 685
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 22/312 (7%)
Query: 1 MATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGSA----QKDF 56
MA G GKSLCYQ+P ++ +VVSPL+SL+QDQVM L GI A L S +
Sbjct: 111 MAAGGGKSLCYQLPAVLRNGVALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKDNEKV 170
Query: 57 TVQT--KAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVE 114
+Q+ + G +L++TPEK + EAHC S+WGHDFR +
Sbjct: 171 YIQSFWRRARGDLKLLYVTPEKITKKQEIY---------------EAHCCSQWGHDFRPD 215
Query: 115 YKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFS 174
YKNL L++ VP V LTATAT++V+ D+++ L + V + +R NLFY VK S
Sbjct: 216 YKNLGILKTQFPNVPMVALTATATQRVQNDLVEMLHIRRCVKFVSTVNRPNLFYMVKEKS 275
Query: 175 R-GQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSR 233
+ +DE+ I + + S I+YC + K+ EQ++K L E GI AG YH M+ R
Sbjct: 276 SVSKVVVDEIAEFIQESYPNHESGIVYCFSRKECEQVAKELRERGISAGHYHADMDVNDR 335
Query: 234 EESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSV 293
E+ H + +++Q++V T+AFGMGI+KP++R VIH+ KS+E+YYQESGR GRDG+PS
Sbjct: 336 EKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSE 395
Query: 294 CWLYYTRGDFAK 305
C LY+ GD +
Sbjct: 396 CLLYFRPGDVPR 407
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 191/319 (59%), Gaps = 17/319 (5%)
Query: 1 MATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGS---AQKDFT 57
M TG GKS+CYQ+P L + +VV PLI+LM++QVMALKE+GI AE+L S A+
Sbjct: 64 MPTGGGKSMCYQIPALAKEGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDK 123
Query: 58 VQTKAEHGQ--FDILFMTPEKACTISTSFWSNLLKAG----ISLFAVDEAHCISEWGHDF 111
+ G+ +L++TPE T F S L K +SL A+DEAHCIS WGHDF
Sbjct: 124 IHEDLGSGKPSTRLLYVTPELIAT--PGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDF 181
Query: 112 RVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVK 171
R Y+ L LRS L +VP + LTATA KV+ D+++SL M N +L SF+R N++Y V
Sbjct: 182 RPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVVESLHMQNALILKTSFNRPNIYYEV- 240
Query: 172 PFSRGQSFIDELVREISKEVDS--GTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMN 229
R + +D+ ++S + S IIYC + +S L++ GI YH +N
Sbjct: 241 ---RYKDLLDDSYSDLSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLN 297
Query: 230 GKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
K R ++ + +++VAT+AFGMGID+ ++R V H+ PKS+E++YQESGR GRD
Sbjct: 298 NKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQ 357
Query: 290 IPSVCWLYYTRGDFAKGEF 308
+PS LYY D + EF
Sbjct: 358 LPSTSLLYYGVDDRRRMEF 376
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 191/319 (59%), Gaps = 17/319 (5%)
Query: 1 MATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGS---AQKDFT 57
M TG GKS+CYQ+P L + +VV PLI+LM++QVMALKE+GI AE+L S A+
Sbjct: 64 MPTGGGKSMCYQIPALAKEGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDK 123
Query: 58 VQTKAEHGQ--FDILFMTPEKACTISTSFWSNLLKAG----ISLFAVDEAHCISEWGHDF 111
+ G+ +L++TPE T F S L K +SL A+DEAHCIS WGHDF
Sbjct: 124 IHEDLGSGKPSTRLLYVTPELIAT--PGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDF 181
Query: 112 RVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVK 171
R Y+ L LRS L +VP + LTATA KV+ D+++SL M N +L SF+R N++Y V
Sbjct: 182 RPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVVESLHMQNALILKTSFNRPNIYYEV- 240
Query: 172 PFSRGQSFIDELVREISKEVDS--GTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMN 229
R + +D+ ++S + S IIYC + +S L++ GI YH +N
Sbjct: 241 ---RYKDLLDDSYSDLSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLN 297
Query: 230 GKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
K R ++ + +++VAT+AFGMGID+ ++R V H+ PKS+E++YQESGR GRD
Sbjct: 298 NKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQ 357
Query: 290 IPSVCWLYYTRGDFAKGEF 308
+PS LYY D + EF
Sbjct: 358 LPSTSLLYYGVDDRRRMEF 376
>Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr2:578880-586948 | 20130731
Length = 1159
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 188/314 (59%), Gaps = 13/314 (4%)
Query: 1 MATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGS-----AQKD 55
M TG GKSL YQ+P L+ +V+SPL+SL+QDQ+M L + I A YL + Q++
Sbjct: 430 MPTGGGKSLTYQLPALINPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANLEWAEQQE 489
Query: 56 FTVQTKAEHGQFDILFMTPEKAC---TISTSFWSNLLKAGISLFAVDEAHCISEWGHDFR 112
+ +++ ++ +L++TPEK + S + +S +DEAHC+S+WGHDFR
Sbjct: 490 ILRELNSDYCKYKLLYVTPEKVARSDVLLRQLESLHGRELLSRIVIDEAHCVSQWGHDFR 549
Query: 113 VEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKP 172
+Y+ L L+ P + LTATAT V+ D++++L + N V SF+R NL+Y V P
Sbjct: 550 PDYQGLGVLKQKFPNTPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVP 609
Query: 173 FSRG-QSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGK 231
++ ID+ +RE D IIYC + D E++++ L E G K YHG M+
Sbjct: 610 KTKKCLEDIDKFIRE--NHFDE--CGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPD 665
Query: 232 SREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIP 291
R R + +DE+ I+ AT+AFGMGI+KP++R VIH+ PKS+E Y+QE GR GRDG
Sbjct: 666 QRAHVQRQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSVEGYHQECGRAGRDGQR 725
Query: 292 SVCWLYYTRGDFAK 305
S C LYY+ D+ +
Sbjct: 726 SSCVLYYSYSDYIR 739
>Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37328725-37334465 | 20130731
Length = 603
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 182/322 (56%), Gaps = 27/322 (8%)
Query: 1 MATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKER-GIKAEYLGSAQKDFTV- 58
M TG GKSLCYQ+P + +VVSPL+SL+QDQ++ L + GI A +L S Q
Sbjct: 223 MPTGGGKSLCYQLPATLQPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQNASQAA 282
Query: 59 ----QTKAEHGQFDILFMTPEKACTISTSFWSNL----LKAGISLFAVDEAHCISEWGHD 110
+ + + +L++TPE+ + SF L K ++ F VDEAHC+S+WGHD
Sbjct: 283 AVLQELRKDKPSCKLLYVTPERIAG-NQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHD 341
Query: 111 FRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGV 170
FR +Y+ L L+ VP + LTATAT VR DI+ +L++ + VL SFDR NL Y V
Sbjct: 342 FRPDYRGLGSLKQNFPRVPVMALTATATHPVREDILNALRIPHAIVLERSFDRPNLKYEV 401
Query: 171 -----KPFSR-GQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTE-AGIKAGM 223
+P + GQ +D + I+YC + + +SK L E IKA
Sbjct: 402 IVKTKEPLKQLGQLLMDRFKSQCG---------IVYCLSKSECVDVSKFLNEKCKIKAAY 452
Query: 224 YHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESG 283
YH + + R + + EV I+ ATIAFGMGIDK ++R VIH KSIESYYQESG
Sbjct: 453 YHAGLAARQRVAVQKKWHDGEVHIVCATIAFGMGIDKADVRFVIHNTMSKSIESYYQESG 512
Query: 284 RCGRDGIPSVCWLYYTRGDFAK 305
R GRD +P+VC Y + DF++
Sbjct: 513 RAGRDNLPAVCIALYQKKDFSR 534
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 165/308 (53%), Gaps = 19/308 (6%)
Query: 1 MATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGSAQ---KDFT 57
+ TG+GKSLCYQ+ L++ +VVSPL++LM DQ+ L I L SAQ +
Sbjct: 298 LPTGAGKSLCYQLSALILPGITLVVSPLVALMIDQLRQLPPL-ISGALLSSAQTFEESSE 356
Query: 58 VQTKAEHGQFDILFMTPEKACTISTSFWSNLLKAG--ISLFAVDEAHCISEWGHDFRVEY 115
+ G +LF++PE+ ++ F S ++ G +SL +DEAHCISEW H+FR +
Sbjct: 357 TLNQLRQGTIKVLFVSPER--FLNEEFLS-VISGGLAVSLVVIDEAHCISEWSHNFRPSF 413
Query: 116 KNLDKLRSVLVEVPF-----VGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGV 170
+LR+ L+ + +TATAT I+ +L + ++ + R NL V
Sbjct: 414 M---RLRASLLHKSLNVGSILAMTATATTTTLDAIMSALDIPRTNLIQNAHLRDNLCLSV 470
Query: 171 KPFSRGQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNG 230
D LV S S I+YC + +QIS+ L + IKA YH ++
Sbjct: 471 SLIKNRMK--DLLVLMKSSPFAEVKSIIVYCKFQSETDQISRYLNDNNIKAKSYHSGISA 528
Query: 231 KSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGI 290
K R LF ++++++VAT+AFGMG+DK ++ VIHY P S+E Y QE GR GRDG
Sbjct: 529 KERGYVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPGSLEEYVQEIGRAGRDGR 588
Query: 291 PSVCWLYY 298
S C L+Y
Sbjct: 589 LSYCHLFY 596
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Query: 2 ATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGSAQKDFTVQTK 61
ATGSGKSLC+Q+P L+ K +V+SPLISLM DQ + L + GI A +LGS Q D TV+ K
Sbjct: 187 ATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKK 246
Query: 62 AEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLD-- 119
A G + I+++ PE + GI+LFA+DE HC+S+WGHDFR Y L
Sbjct: 247 AMRGMYSIVYICPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVL 306
Query: 120 -------KLRSVLVEVPFVGLTATATEKVRFDIIKSLKMN-NPYVLVGSFDRANLFYGVK 171
KL+S+ ++P + LTATAT++VR DI+KSL+++ + V++ SF R NL + VK
Sbjct: 307 RENFTTGKLKSLKFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVK 366
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 72/101 (71%)
Query: 197 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 256
TIIY T KD +I+K L ++G+KA Y+ + +H+ F + ++++VATIAFGM
Sbjct: 509 TIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGM 568
Query: 257 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLY 297
GIDK N+R++IHYG P+S+E+YYQE+GR GRDG + C LY
Sbjct: 569 GIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILY 609
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Query: 2 ATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGSAQKDFTVQTK 61
ATGSGKSLC+Q+P L+ K +V+SPLISLM DQ + L + GI A +LGS Q D TV+ K
Sbjct: 187 ATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKK 246
Query: 62 AEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLD-- 119
A G + I+++ PE + GI+LFA+DE HC+S+WGHDFR Y L
Sbjct: 247 AMRGMYSIVYICPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVL 306
Query: 120 -------KLRSVLVEVPFVGLTATATEKVRFDIIKSLKMN-NPYVLVGSFDRANLFYGVK 171
KL+S+ ++P + LTATAT++VR DI+KSL+++ + V++ SF R NL + VK
Sbjct: 307 RENFTTGKLKSLKFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVK 366
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 72/101 (71%)
Query: 197 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 256
TIIY T KD +I+K L ++G+KA Y+ + +H+ F + ++++VATIAFGM
Sbjct: 509 TIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGM 568
Query: 257 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLY 297
GIDK N+R++IHYG P+S+E+YYQE+GR GRDG + C LY
Sbjct: 569 GIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILY 609
>Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050056-37045638 | 20130731
Length = 614
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Query: 2 ATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGSAQKDFTVQTK 61
ATGSGKSLC+Q+P L+ K +V+SPLISLM DQ + L + GI A +LGS Q D TV+ K
Sbjct: 187 ATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKK 246
Query: 62 AEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLD-- 119
A G + I+++ PE + GI+LFA+DE HC+S+WGHDFR Y L
Sbjct: 247 AMRGMYSIVYICPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVL 306
Query: 120 -------KLRSVLVEVPFVGLTATATEKVRFDIIKSLKMN-NPYVLVGSFDRANLFYGVK 171
KL+S+ ++P + LTATAT++VR DI+KSL+++ + V++ SF R NL + VK
Sbjct: 307 RENFTTGKLKSLKFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVK 366
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 73/105 (69%)
Query: 197 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 256
TIIY T KD +I+K L ++G+KA Y+ + +H+ F + ++++VATIAFGM
Sbjct: 509 TIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGM 568
Query: 257 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRG 301
GIDK N+R++IHYG P+S+E+YYQE+GR GRDG + C +Y G
Sbjct: 569 GIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCSKFYYTG 613
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Query: 2 ATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQVMALKERGIKAEYLGSAQKDFTVQTK 61
ATGSGKSLC+Q+P L+ K +V+SPLISLM DQ + L + GI A +LGS Q D TV+ K
Sbjct: 187 ATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKK 246
Query: 62 AEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLD-- 119
A G + I+++ PE + GI+LFA+DE HC+S+WGHDFR Y L
Sbjct: 247 AMRGMYSIVYICPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVL 306
Query: 120 -------KLRSVLVEVPFVGLTATATEKVRFDIIKSLKMN-NPYVLVGSFDRANLFYGVK 171
KL+S+ ++P + LTATAT++VR DI+KSL+++ + V++ SF R NL + VK
Sbjct: 307 RENFTTGKLKSLKFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVK 366
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 72/101 (71%)
Query: 197 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 256
TIIY T KD +I+K L ++G+KA Y+ + +H+ F + ++++VATIAFGM
Sbjct: 509 TIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGM 568
Query: 257 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLY 297
GIDK N+R++IHYG P+S+E+YYQE+GR GRDG + C LY
Sbjct: 569 GIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILY 609
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 75.9 bits (185), Expect = 4e-14, Method: Composition-based stats.
Identities = 88/326 (26%), Positives = 148/326 (45%), Gaps = 43/326 (13%)
Query: 3 TGSGKSLCYQVPPLVVKK----------TGIVVSP---LISLMQDQVM--ALKERGIKAE 47
TGSGK+L Y +P ++ + T +V++P L + +Q++V A R
Sbjct: 541 TGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSCTC 600
Query: 48 YLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEW 107
G A K +Q K DI+ TP + I + +SL +DEA + +
Sbjct: 601 LYGGAPK--ALQLKELDRGADIVVATPGRLNDILE--MKKIDFGQVSLLVLDEADRMLDM 656
Query: 108 GHDFRVEYKNLDKLRSVLVEVP----FVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDR 163
G + ++R ++ E+P + TAT ++VR I L +N V +G+ D
Sbjct: 657 GFE--------PQIRKIVNEIPPRRQTLMYTATWPKEVR-KIAGDLLVNPVQVNIGNVDE 707
Query: 164 --AN----LFYGVKPFSRGQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEA 217
AN + V P Q +++++R S+E G+ II+C+T K +Q+++S+
Sbjct: 708 LAANKSITQYVEVVPQMEKQRRLEQILR--SQE--RGSKIIIFCSTKKLCDQLARSIGRT 763
Query: 218 GIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIES 277
A HG + R+ F + I+VAT G+D +IR VI+Y P +E
Sbjct: 764 -FGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVED 822
Query: 278 YYQESGRCGRDGIPSVCWLYYTRGDF 303
Y GR GR G V + +++ D+
Sbjct: 823 YVHRIGRTGRAGATGVAYTFFSEQDW 848
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 75.9 bits (185), Expect = 4e-14, Method: Composition-based stats.
Identities = 88/326 (26%), Positives = 148/326 (45%), Gaps = 43/326 (13%)
Query: 3 TGSGKSLCYQVPPLVVKK----------TGIVVSP---LISLMQDQVM--ALKERGIKAE 47
TGSGK+L Y +P ++ + T +V++P L + +Q++V A R
Sbjct: 541 TGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSCTC 600
Query: 48 YLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEW 107
G A K +Q K DI+ TP + I + +SL +DEA + +
Sbjct: 601 LYGGAPK--ALQLKELDRGADIVVATPGRLNDILE--MKKIDFGQVSLLVLDEADRMLDM 656
Query: 108 GHDFRVEYKNLDKLRSVLVEVP----FVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDR 163
G + ++R ++ E+P + TAT ++VR I L +N V +G+ D
Sbjct: 657 GFE--------PQIRKIVNEIPPRRQTLMYTATWPKEVR-KIAGDLLVNPVQVNIGNVDE 707
Query: 164 --AN----LFYGVKPFSRGQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEA 217
AN + V P Q +++++R S+E G+ II+C+T K +Q+++S+
Sbjct: 708 LAANKSITQYVEVVPQMEKQRRLEQILR--SQE--RGSKIIIFCSTKKLCDQLARSIGRT 763
Query: 218 GIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIES 277
A HG + R+ F + I+VAT G+D +IR VI+Y P +E
Sbjct: 764 -FGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVED 822
Query: 278 YYQESGRCGRDGIPSVCWLYYTRGDF 303
Y GR GR G V + +++ D+
Sbjct: 823 YVHRIGRTGRAGATGVAYTFFSEQDW 848
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 34/325 (10%)
Query: 3 TGSGKSLCYQVPPLVVKKTGIVVSP-----LISLMQDQVMALKERGIKAEYLGSAQKDFT 57
TGSGK+L Y +P +V ++ P ++ L + +A++ + ++ S++ T
Sbjct: 141 TGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKST 200
Query: 58 V---------QTKAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWG 108
Q + +I+ TP + + S +NL + ++ +DEA + + G
Sbjct: 201 CIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRR--VTYLVLDEADRMLDMG 258
Query: 109 HDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPY-VLVGSFD-RANL 166
D ++ K + ++R L +AT + + + NPY V++GS D +AN
Sbjct: 259 FDPQIR-KIVSQIRPDRQT-----LYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKAN- 311
Query: 167 FYGVKPF----SRGQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAG 222
+ +K + Q + D+LV+ + +D G+ +I+ T K +QI++ L G A
Sbjct: 312 -HAIKQYVDIVPEKQKY-DKLVKLLEDIMD-GSRILIFMDTKKGCDQITRQLRMDGWPAL 368
Query: 223 MYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQES 282
HG + R+ F + IM AT G+D +++ VI+Y P S+E Y
Sbjct: 369 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 428
Query: 283 GRCGRDGIPSVCWLYYTRGD--FAK 305
GR GR G + ++T + FAK
Sbjct: 429 GRTGRAGAKGTAYTFFTAANARFAK 453
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 50/329 (15%)
Query: 3 TGSGKSLCYQVP--------PLVVKKTG---IVVSPLISL---MQDQVMALKER-GIKAE 47
TGSGK+L Y +P P +V+ G +V++P L +Q + M R I+
Sbjct: 247 TGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCT 306
Query: 48 YL-GSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISE 106
+ G A K Q + +I+ TP + + + +NL + ++ +DEA + +
Sbjct: 307 CIYGGAPKG--PQIRDLRMGVEIVIATPGRLIDMLEAQHTNLQR--VTYLVLDEADRMLD 362
Query: 107 WGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPY-VLVGSFDRAN 165
G + ++ K ++++R L +AT + + ++NPY V++GS
Sbjct: 363 MGFEPQIR-KIVNQIRPDRQT-----LYWSATWPKEVESLARQFLHNPYKVVIGS----- 411
Query: 166 LFYGVKPFSRGQSFIDELVREIS------------KEVDSGTSTIIYCTTIKDVEQISKS 213
P+ + I+++V ++ KEV G+ +I+ T K +Q+++
Sbjct: 412 ------PYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 465
Query: 214 LTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPK 273
L G A HG N R+ F IM AT G+D +I+ V++Y P
Sbjct: 466 LRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPS 525
Query: 274 SIESYYQESGRCGRDGIPSVCWLYYTRGD 302
S+E Y GR GR G + ++T +
Sbjct: 526 SLEDYVHRIGRTGRAGAKGTAYSFFTSAN 554
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 141/317 (44%), Gaps = 35/317 (11%)
Query: 3 TGSGKSLCYQVPPLV-VKKTG---------IVVSP---LISLMQDQVMAL-KERGIKAEY 48
TGSGK+L Y +P + +K+T +V+SP L + +QD+ + K I
Sbjct: 210 TGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKTSRIACTC 269
Query: 49 L-GSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEW 107
L G A K Q K DI+ TP + I +L + +S +DEA + +
Sbjct: 270 LYGGAPK--GPQLKDIDRGADIVVATPGRLNDILEMRRISLHQ--VSYLVLDEADRMLDM 325
Query: 108 GHDFRVEYKNLDKLRSVLVEVPF----VGLTATATEKVRFDIIKSLKMNNPYVLVGSFDR 163
G + ++R ++ VP + TAT ++VR I L +N V +G+ D
Sbjct: 326 GFE--------PQIRKIVNGVPARRQTLMFTATWPKEVRR-IAADLLVNPVQVNIGNVDE 376
Query: 164 ANLFYGVKPFSRGQSFIDELVR--EISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKA 221
+ +++++ R I + D G+ II+C+T K +Q++++LT A
Sbjct: 377 LVANKSITQHIEVLTYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGA 435
Query: 222 GMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQE 281
HG + R+ F ++VAT G+D +IR V+++ P +E Y
Sbjct: 436 AAIHGDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHR 495
Query: 282 SGRCGRDGIPSVCWLYY 298
GR GR G + + ++
Sbjct: 496 IGRTGRAGATGIAYTFF 512
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 141/317 (44%), Gaps = 35/317 (11%)
Query: 3 TGSGKSLCYQVPPLV-VKKTG---------IVVSP---LISLMQDQVMAL-KERGIKAEY 48
TGSGK+L Y +P + +K+T +V+SP L + +QD+ + K I
Sbjct: 210 TGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKTSRIACTC 269
Query: 49 L-GSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEW 107
L G A K Q K DI+ TP + I +L + +S +DEA + +
Sbjct: 270 LYGGAPK--GPQLKDIDRGADIVVATPGRLNDILEMRRISLHQ--VSYLVLDEADRMLDM 325
Query: 108 GHDFRVEYKNLDKLRSVLVEVPF----VGLTATATEKVRFDIIKSLKMNNPYVLVGSFDR 163
G + ++R ++ VP + TAT ++VR I L +N V +G+ D
Sbjct: 326 GFE--------PQIRKIVNGVPARRQTLMFTATWPKEVRR-IAADLLVNPVQVNIGNVDE 376
Query: 164 ANLFYGVKPFSRGQSFIDELVR--EISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKA 221
+ +++++ R I + D G+ II+C+T K +Q++++LT A
Sbjct: 377 LVANKSITQHIEVLTYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGA 435
Query: 222 GMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQE 281
HG + R+ F ++VAT G+D +IR V+++ P +E Y
Sbjct: 436 AAIHGDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHR 495
Query: 282 SGRCGRDGIPSVCWLYY 298
GR GR G + + ++
Sbjct: 496 IGRTGRAGATGIAYTFF 512
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 197 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 256
TI++CT+I + IS L G+ H QM ++R ++ F ++ I+VAT
Sbjct: 478 TIVFCTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRFRENDNGILVATDVAAR 537
Query: 257 GIDKPNIRKVIHYGCPKSIESYYQESGRCGR 287
G+D P +R V+HY P S E Y SGR R
Sbjct: 538 GLDIPGVRTVVHYQLPHSAEVYVHRSGRTAR 568
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 14/237 (5%)
Query: 68 DILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVE 127
DI TP + + NL + + +DEA + + G VE K L++L +
Sbjct: 204 DIAVGTPGRIIDLLNRGALNLKE--VQFVILDEADQMLQVGFQEDVE-KILERLPAERQT 260
Query: 128 VPFVGLTATATEKVRFDIIKSLKMNNPYV--LVGSFDRANLFYGVKPFS-RGQSFIDE-L 183
+ F T +++ + +K NP LVG D+ L G+ +S +++ +
Sbjct: 261 LMFSATMPTWIKQLTRNYLK-----NPLTIDLVGDSDQ-KLADGISLYSILSDAYVKAGI 314
Query: 184 VREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRD 243
+ + KE G I++ T +D ++IS ++++ I HG ++ RE + F
Sbjct: 315 IVPLIKEHAKGGKCIVFTQTKRDADRISHGMSKS-IPCEALHGDISQIQRERTLAGFRNG 373
Query: 244 EVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTR 300
++VAT G+D PN+ VIHY P + E + SGR GR G L YT+
Sbjct: 374 HFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQ 430
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 177 QSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREES 236
Q +DEL + + I++ T K + ++K+L + G + HG + RE S
Sbjct: 541 QRLLDEL---------NDKTAIVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQREIS 591
Query: 237 HRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWL 296
F ++VAT G GID P++ VI+Y P +IE Y GR GR G V
Sbjct: 592 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATT 651
Query: 297 YYTRGD 302
+ T D
Sbjct: 652 FLTLQD 657
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 132/321 (41%), Gaps = 49/321 (15%)
Query: 3 TGSGKSLCYQVP------------PLVVKKT--GIVVSPLISLMQDQ-------VMALKE 41
TGSGK+L + +P P+V + G+++ P L + ++ LKE
Sbjct: 192 TGSGKTLVFVLPMIMMAMQEEIRMPIVPGEGPFGLIICPSWELARQTYEVIEQFLLPLKE 251
Query: 42 RGIKA--EYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVD 99
G L D Q K I+ TP + + NL +D
Sbjct: 252 AGYPELRPLLCIGGIDMRSQLKIVKKGVHIVVATPGRLKDMLAKKKMNL--DNCRYLTLD 309
Query: 100 EAHCISEWG--HDFRVEYKNLDKLRSVLVEVPFVGLTATATEKV----RFDIIKSLKMNN 153
EA + + G D R + + R L+ +AT K+ R ++K + +N
Sbjct: 310 EADRLVDPGFEDDIREVFDHFKAQRQTLL------FSATMPTKIQNFARSALVKPIIVN- 362
Query: 154 PYVLVGSFDRANL-FYGVKPFSRGQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISK 212
VG ANL + + ++ I L+ + K + +I+C DV+ I +
Sbjct: 363 ----VGRAGAANLDVIQEVEYVKQEAKIVYLLECLQK---TPPPVLIFCENKADVDNIHE 415
Query: 213 SLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCP 272
L G++A HG + + RE + F + ++VAT G+D P+I+ VI+Y P
Sbjct: 416 YLLLKGVEAVAIHGDKDQEDREYAISSFKTGKKDVLVATDIASKGLDFPDIQHVINYDMP 475
Query: 273 KSIESYYQ---ESGRCGRDGI 290
IE+Y +GRCG+ GI
Sbjct: 476 AEIENYVHRIGRTGRCGKTGI 496
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 133/321 (41%), Gaps = 49/321 (15%)
Query: 3 TGSGKSLCYQVPPLVVKKTGIVVSPLI---------------------SLMQDQVMALKE 41
TGSGK+L + +P +++ ++ P++ ++++ ++ LKE
Sbjct: 190 TGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICPSRELARQTYEVIEEFLLPLKE 249
Query: 42 RGIKA--EYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVD 99
G L D Q + I+ TP + + NL +D
Sbjct: 250 AGYPELRPLLCIGGIDMRSQLEIVKKGVHIVVATPGRLKDMLAKKKMNL--DNCRYLTLD 307
Query: 100 EAHCISEWG--HDFRVEYKNLDKLRSVLVEVPFVGLTATATEKV----RFDIIKSLKMNN 153
EA + + G D R + + R L+ +AT K+ R ++K + +N
Sbjct: 308 EADRLVDLGFEDDIREVFDHFKAQRQTLL------FSATMPTKIQNFARSALVKPIIVN- 360
Query: 154 PYVLVGSFDRANL-FYGVKPFSRGQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISK 212
VG ANL + + ++ I L+ + K + +I+C DV+ I +
Sbjct: 361 ----VGRAGAANLDVIQEVEYVKQEAKIVYLLECLQK---TPPPVLIFCENKADVDDIHE 413
Query: 213 SLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCP 272
L G++A HG + + RE + F + ++VAT G+D P+I+ VI+Y P
Sbjct: 414 YLLLKGVEAVAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 473
Query: 273 KSIESYYQ---ESGRCGRDGI 290
IE+Y +GRCG+ GI
Sbjct: 474 AEIENYVHRIGRTGRCGKTGI 494
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 194 GTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIA 253
G I++ T +D +++S + ++ IK HG ++ RE + F ++VAT
Sbjct: 334 GGKCIVFTQTKRDADRLSHIMAKS-IKCEALHGDISQTQRERTLTGFRNSYFNVLVATDV 392
Query: 254 FGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 299
G+D PN+ VIHY P + E + SGR GR G L +T
Sbjct: 393 ASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHT 438
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 194 GTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIA 253
G I++ T +D +++S + ++ IK HG ++ RE + F ++VAT
Sbjct: 334 GGKCIVFTQTKRDADRLSHIMAKS-IKCEALHGDISQTQRERTLTGFRNSYFNVLVATDV 392
Query: 254 FGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 299
G+D PN+ VIHY P + E + SGR GR G L +T
Sbjct: 393 ASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHT 438
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 179 FIDELVREISKEVDSGTS---TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREE 235
+D LV E S+ G TI++ ++++++L G+ A HG + RE
Sbjct: 351 LLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREA 410
Query: 236 SHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCW 295
+ F I+VAT G+D + VI+ PK+ E Y GR GR G +
Sbjct: 411 ALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIAT 470
Query: 296 LYYTRGDF 303
+YT D
Sbjct: 471 SFYTDRDM 478
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 179 FIDELVREISKEVDSGTS---TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREE 235
+D LV E S+ G TI++ ++++++L G+ A HG + RE
Sbjct: 320 LLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREA 379
Query: 236 SHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCW 295
+ F I+VAT G+D + VI+ PK+ E Y GR GR G +
Sbjct: 380 ALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIAT 439
Query: 296 LYYTRGDF 303
+YT D
Sbjct: 440 SFYTDRDM 447
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 196 STIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFG 255
+ I++ T K + ++K+L G + HG + RE S F ++VAT G
Sbjct: 513 TAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAG 570
Query: 256 MGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 302
GID P++ VI+Y P +IE Y GR GR G V + T D
Sbjct: 571 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 617
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 196 STIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFG 255
+ I++ T K + ++K+L G + HG + RE S F ++VAT G
Sbjct: 513 TAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAG 570
Query: 256 MGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 302
GID P++ VI+Y P +IE Y GR GR G V + T D
Sbjct: 571 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 617
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 196 STIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFG 255
+ I++ T K + ++K+L G + HG + RE S F ++VAT G
Sbjct: 513 TAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAG 570
Query: 256 MGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 302
GID P++ VI+Y P +IE Y GR GR G V + T D
Sbjct: 571 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 617
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 197 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 256
T+++ T K + + L G A HG + RE++ R F I+VAT
Sbjct: 415 TLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREQALRSFKTGNTPILVATDVAAR 474
Query: 257 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
G+D P + V+++ P I+ Y GR GR G
Sbjct: 475 GLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAG 507
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 93 ISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMN 152
+S+ +DEA + E G F E + L +R + + +AT TE+V D+IK L ++
Sbjct: 298 LSVLILDEADRLLELG--FSAEIQEL--VRVCPKKRQTMLFSATMTEEVD-DLIK-LSLS 351
Query: 153 NPYVLVGSFDRANLFYGVKPFS-RGQSFIDELVR-----EISKEV-------DSGTS-TI 198
P L P + R S +E+VR E+++E + TS I
Sbjct: 352 KP-----------LRLSADPLAKRPASLTEEVVRLRRMREVNQEAVLLAMCSKTFTSKVI 400
Query: 199 IYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGI 258
I+ T + ++ +G+KA HG + R + F + +V +VAT G+
Sbjct: 401 IFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLGALEEFRKQQVDFLVATDVAARGL 460
Query: 259 DKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 302
D ++ VI++ CP+ + SY GR R G + T D
Sbjct: 461 DIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDND 504
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 32/258 (12%)
Query: 59 QTKAEHGQFDILFMTPEKACT-ISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKN 117
Q A + DI+ TP + + S +L +++ +DEA + E G F E +
Sbjct: 255 QEAALRSRPDIVVATPGRMIDHLRNSMSVDL--DDLAVLILDEADRLLELG--FSAEIQE 310
Query: 118 LDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQ 177
L +R + + +AT TE+V D+IK L ++ P L R
Sbjct: 311 L--VRVCPKKRQTMLFSATMTEEVD-DLIK-LSLSKPVRLSAD----------PSAKRPA 356
Query: 178 SFIDELVR-----EISKEV--------DSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMY 224
S +E+VR E++ E + II+ T + ++ +G+KA
Sbjct: 357 SLTEEVVRIRRMREVNHEAVLLAMCTKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAEL 416
Query: 225 HGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGR 284
HG + R ++ F + +V +VAT G+D ++ VI++ CP+ + SY GR
Sbjct: 417 HGNLTQAQRLDALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGR 476
Query: 285 CGRDGIPSVCWLYYTRGD 302
R G + T D
Sbjct: 477 TARAGRAGSAVTFVTDSD 494
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 195 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 254
+II+C ++ VE ++K +TE G H +M R F + +V T F
Sbjct: 378 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 437
Query: 255 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
GID + VI++ PK+ E+Y GR GR G
Sbjct: 438 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFG 472
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 195 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 254
+II+C ++ VE ++K +TE G H +M R F + +V T F
Sbjct: 387 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 446
Query: 255 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
GID + VI++ PK+ E+Y GR GR G
Sbjct: 447 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFG 481
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 195 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 254
+II+C ++ VE ++K +TE G H +M R F + +V T F
Sbjct: 380 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 439
Query: 255 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
GID + VI++ PK+ E+Y GR GR G
Sbjct: 440 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFG 474
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 93 ISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEV--PFVGLTATATEKVRFDIIKSLK 150
++ F VDE C+ + G FR D++ + + P V + + T + S+
Sbjct: 289 VTTFVVDEVDCMLQRG--FR------DQVLQIFTALSQPQVLMYSATTSDSLEKMANSMA 340
Query: 151 MNNPYVLVGSFDRAN-----LFYGVKPFSRGQSFIDELVREISKEVDSGTSTIIYCTTIK 205
+ + VG +R N L V+ + Q D L + +IY +
Sbjct: 341 KDTVVITVGEPNRPNKAVKQLAIWVESKQKKQKLFDIL----KSQKHFKPPVVIYVGSRL 396
Query: 206 DVEQISKSLT-EAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIR 264
+ ++ ++T G+KA HG+ + R E + F+ E ++VAT G G+D +R
Sbjct: 397 GADLLANAITVSTGVKAVSIHGEKSMTERREIMQSFMVGEFPVVVATGVLGRGVDLLGVR 456
Query: 265 KVIHYGCPKSIESYYQESGRCGRDG 289
+VI + P SI Y + GR R G
Sbjct: 457 QVIVFDMPNSINEYVHQIGRASRMG 481
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%)
Query: 197 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 256
T+++ T K + + L A HG RE + R F R IMVAT
Sbjct: 404 TLVFVETKKGADALENWLCRINFPAIAIHGDKVQMERERALRSFKRGLTPIMVATDVASR 463
Query: 257 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 299
G+D P++ VI++ P+ I+ Y GR GR G + +++
Sbjct: 464 GLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQSGLATAFFS 506
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%)
Query: 197 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 256
T+++ T K + + L A HG + + RE + R F I+VAT
Sbjct: 407 TLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAAR 466
Query: 257 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 302
G+D P++ V+++ P I+ Y GR GR G + ++ +
Sbjct: 467 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENN 512
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%)
Query: 197 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 256
T+++ T K + + L A HG + + RE + R F I+VAT
Sbjct: 407 TLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAAR 466
Query: 257 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 302
G+D P++ V+++ P I+ Y GR GR G + ++ +
Sbjct: 467 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENN 512
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 209 QISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIH 268
++ K L + G KA G + R ++ LF +M+AT G+D P++ VI+
Sbjct: 367 RVEKMLQQGGWKAVSISGDKSQHERTKALSLFKNGSCPLMIATDVAARGLDIPDVEVVIN 426
Query: 269 YGCPKSIESYYQESGRCGRDGIPSVCWLYYT 299
+ P ++E Y GR GR G V ++T
Sbjct: 427 FSFPLTLEDYVHRIGRTGRAGKKGVAHTFFT 457
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%)
Query: 195 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 254
+I+ ++ +++K L E + H M+ + R + ++ F + +I+VAT
Sbjct: 366 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLV 425
Query: 255 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
G GID + VI+Y P S ++Y GR GR G
Sbjct: 426 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 460
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 195 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 254
+I+ ++ ++ K L E + H M+ + R + ++ F +I+VAT
Sbjct: 289 NQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLV 348
Query: 255 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
G GID + VI+Y P S ++Y GR GR G
Sbjct: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 195 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 254
+I+ ++ ++ + L E + H M+ + R + +R F +I+VAT
Sbjct: 289 NQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSRILVATDLV 348
Query: 255 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
G GID + VI+Y P S ++Y GR GR G
Sbjct: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 195 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 254
+I+ ++ ++ + L E + H M+ + R + +R F +I+VAT
Sbjct: 289 NQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSRILVATDLV 348
Query: 255 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
G GID + VI+Y P S ++Y GR GR G
Sbjct: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%)
Query: 195 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 254
T ++I+ T + V+ ++ + HG M+ +R+ R F ++++ T
Sbjct: 280 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
Query: 255 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 302
GID + VI+Y P E+Y GR GR G V + T D
Sbjct: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDD 387
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 195 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 254
T +I+C T + V+ +++ + HG M + R+ F ++++ T +
Sbjct: 273 TQAVIFCNTKRKVDWLTEKMRNNNFTVSAMHGDMPQRERDAIMGEFRAGTTRVLITTDVW 332
Query: 255 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 289
G+D + VI+Y P + E Y GR GR G
Sbjct: 333 ARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFG 367