Miyakogusa Predicted Gene

Lj0g3v0054409.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054409.2 Non Characterized Hit- tr|G7J0G7|G7J0G7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,34.01,0.0000000008, ,CUFF.2434.2
         (188 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g048210.1 | outer arm dynein light chain 1 | HC | chr2:212...   356   8e-99
Medtr8g464200.1 | outer arm dynein light chain 1 | LC | chr8:226...   191   4e-49

>Medtr2g048210.1 | outer arm dynein light chain 1 | HC |
            chr2:21236166-21209346 | 20130731
          Length = 1660

 Score =  356 bits (913), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 176/188 (93%), Positives = 182/188 (96%), Gaps = 2/188 (1%)

Query: 1    MVGSPDLISIPGETSKMYEANVDDVGYRLVAIYTPVREDGVEGQSTSVSTDPIAVEPDVL 60
            MVGSPDLISIPGET +MYEANVDDVGYRLVAIYTPVREDGVEGQS SVSTDPIAVEPDVL
Sbjct: 1475 MVGSPDLISIPGETGRMYEANVDDVGYRLVAIYTPVREDGVEGQSVSVSTDPIAVEPDVL 1534

Query: 61   KEVKQHLDLGSVKFEVLCDKDQGSKKISSVGTYERRILEINRKRLKVVKPATKTSFPNTE 120
            KEVKQ+LDLGSVKFEVLCDKDQ  KKISSVGTYERRILEIN+KR+KVVKPATKTSFP TE
Sbjct: 1535 KEVKQNLDLGSVKFEVLCDKDQ--KKISSVGTYERRILEINKKRVKVVKPATKTSFPTTE 1592

Query: 121  IRGSYAPPFHVELFRNDQHRLKIVVDSENEADLMVHSRHLRDVIVLVIRGLAQRFNSTSL 180
            IRGSY+PPFHVELFRNDQHRLKIVVDSENEADLMV SRH+RDVIVLVIRGLAQRFNSTSL
Sbjct: 1593 IRGSYSPPFHVELFRNDQHRLKIVVDSENEADLMVQSRHIRDVIVLVIRGLAQRFNSTSL 1652

Query: 181  NSLLKIET 188
            NSLLKIET
Sbjct: 1653 NSLLKIET 1660


>Medtr8g464200.1 | outer arm dynein light chain 1 | LC |
           chr8:22676140-22682943 | 20130731
          Length = 656

 Score =  191 bits (484), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 97/153 (63%), Positives = 116/153 (75%), Gaps = 10/153 (6%)

Query: 1   MVGSPDLISIPGETSKMYEANVDDVGYRLVAIYTPVREDGVEGQSTSVSTDPIAVEPDVL 60
           M G PD+I IPGET  +YEANV DVGY+LVA+YTP+REDGVEGQS SVSTDPIAVEPD+L
Sbjct: 492 MEGRPDMI-IPGETCIVYEANVGDVGYKLVAVYTPIREDGVEGQSVSVSTDPIAVEPDIL 550

Query: 61  KEVKQHLDLGSVKFEVLCDKDQGSKKISSVGTYERRILEINRKRLKVVKPATKTSFPNTE 120
           K+V   +D GSVKFEV CD+ Q S+K       ++RIL+INRKR+K+VKPA    FP TE
Sbjct: 551 KKVNCIVDRGSVKFEVACDRGQTSEK------RQKRILDINRKRVKMVKPAF---FPTTE 601

Query: 121 IRGSYAPPFHVELFRNDQHRLKIVVDSENEADL 153
            R SY P  HV+LF ND +RLKI V+ ENE + 
Sbjct: 602 FRASYGPTLHVKLFENDGYRLKIAVEGENETEF 634